Protein–RNA interactions for Protein: A0A0K0K1E9

TRBV7-7, T-cell receptor beta variable 7-7 (Fragment), humanhuman

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV7-7A0A0K0K1E9 THOP1-201ENST00000307741 4804 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
TRBV7-7A0A0K0K1E9 TMEM131-201ENST00000186436 6640 ntAPPRIS P1 TSL 5 BASIC12.95□□□□□ -0.34
TRBV7-7A0A0K0K1E9 CCNL1-203ENST00000461804 1998 ntTSL 2 BASIC12.95□□□□□ -0.34
TRBV7-7A0A0K0K1E9 PPP1R14A-201ENST00000301242 777 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
TRBV7-7A0A0K0K1E9 ZSCAN1-202ENST00000391700 952 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
TRBV7-7A0A0K0K1E9 UBFD1-208ENST00000567264 642 ntAPPRIS ALT2 TSL 5 BASIC12.95□□□□□ -0.34
TRBV7-7A0A0K0K1E9 ADARB1-201ENST00000348831 6882 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
TRBV7-7A0A0K0K1E9 SLC43A1-201ENST00000278426 2598 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
TRBV7-7A0A0K0K1E9 XBP1-201ENST00000216037 1850 ntAPPRIS P2 TSL 1 (best) BASIC12.95□□□□□ -0.34
TRBV7-7A0A0K0K1E9 RNF135-205ENST00000535306 2098 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
TRBV7-7A0A0K0K1E9 SGO1-209ENST00000442720 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
TRBV7-7A0A0K0K1E9 ARFRP1-213ENST00000619493 2456 ntAPPRIS P1 TSL 3 BASIC12.95□□□□□ -0.34
TRBV7-7A0A0K0K1E9 MAP6-201ENST00000304771 3334 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
TRBV7-7A0A0K0K1E9 TCP11-201ENST00000244645 2018 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
TRBV7-7A0A0K0K1E9 REST-206ENST00000612429 1376 ntTSL 5 BASIC12.94□□□□□ -0.34
TRBV7-7A0A0K0K1E9 REST-207ENST00000616975 1370 ntTSL 5 BASIC12.94□□□□□ -0.34
TRBV7-7A0A0K0K1E9 REST-212ENST00000640343 1352 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
TRBV7-7A0A0K0K1E9 MARK1-202ENST00000366918 5169 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
TRBV7-7A0A0K0K1E9 P4HB-201ENST00000331483 2603 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
TRBV7-7A0A0K0K1E9 RAB40C-205ENST00000539661 2609 ntAPPRIS P1 TSL 3 BASIC12.94□□□□□ -0.34
TRBV7-7A0A0K0K1E9 ACAP3-202ENST00000354700 3896 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
TRBV7-7A0A0K0K1E9 CACNA1A-214ENST00000614285 8410 ntAPPRIS ALT2 TSL 5 BASIC12.94□□□□□ -0.34
TRBV7-7A0A0K0K1E9 CARMIL2-201ENST00000334583 4687 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
TRBV7-7A0A0K0K1E9 PRKRIP1-208ENST00000496391 3430 ntAPPRIS P1 TSL 2 BASIC12.94□□□□□ -0.34
TRBV7-7A0A0K0K1E9 ZNF385A-212ENST00000551109 2369 ntTSL 5 BASIC12.94□□□□□ -0.34
TRBV7-7A0A0K0K1E9 PTTG1IP-201ENST00000330938 2760 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
TRBV7-7A0A0K0K1E9 KCTD12-201ENST00000377474 6225 ntAPPRIS P1 BASIC12.94□□□□□ -0.34
TRBV7-7A0A0K0K1E9 HSF4-225ENST00000584272 1549 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
TRBV7-7A0A0K0K1E9 NUDT9-201ENST00000302174 1701 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
TRBV7-7A0A0K0K1E9 LRRC34-201ENST00000446859 1718 ntAPPRIS ALT2 TSL 2 BASIC12.94□□□□□ -0.34
TRBV7-7A0A0K0K1E9 PCMT1-203ENST00000367384 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
TRBV7-7A0A0K0K1E9 IL4I1-201ENST00000341114 2349 ntAPPRIS P4 TSL 1 (best) BASIC12.94□□□□□ -0.34
TRBV7-7A0A0K0K1E9 TMEM255B-202ENST00000375353 6100 ntAPPRIS P2 TSL 1 (best) BASIC12.94□□□□□ -0.34
TRBV7-7A0A0K0K1E9 TAF6-211ENST00000453269 2464 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
TRBV7-7A0A0K0K1E9 SLC35E4-202ENST00000406566 2081 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
TRBV7-7A0A0K0K1E9 AC007326.4-201ENST00000638240 1669 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
TRBV7-7A0A0K0K1E9 RAP1B-207ENST00000450214 1466 ntTSL 2 BASIC12.94□□□□□ -0.34
TRBV7-7A0A0K0K1E9 LRRC1-201ENST00000370882 808 ntTSL 3 BASIC12.94□□□□□ -0.34
TRBV7-7A0A0K0K1E9 AC078883.1-201ENST00000442417 950 ntTSL 3 BASIC12.94□□□□□ -0.34
TRBV7-7A0A0K0K1E9 AC116025.2-201ENST00000576632 443 ntTSL 3 BASIC12.94□□□□□ -0.34
TRBV7-7A0A0K0K1E9 ASPM-201ENST00000294732 6132 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
TRBV7-7A0A0K0K1E9 MAPK11-201ENST00000330651 2431 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
TRBV7-7A0A0K0K1E9 FAM46A-203ENST00000369756 5537 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
TRBV7-7A0A0K0K1E9 TCF4-201ENST00000354452 3482 ntAPPRIS ALT1 TSL 5 BASIC12.94□□□□□ -0.34
TRBV7-7A0A0K0K1E9 NAA35-202ENST00000376040 1797 ntTSL 2 BASIC12.94□□□□□ -0.34
TRBV7-7A0A0K0K1E9 GPR143-203ENST00000467482 1762 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
TRBV7-7A0A0K0K1E9 MTNR1B-201ENST00000257068 1565 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
TRBV7-7A0A0K0K1E9 C7orf49-203ENST00000430372 1579 ntTSL 5 BASIC12.94□□□□□ -0.34
TRBV7-7A0A0K0K1E9 SCARF2-203ENST00000623402 3248 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
TRBV7-7A0A0K0K1E9 SREBF2-201ENST00000361204 5240 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
TRBV7-7A0A0K0K1E9 PKMYT1-204ENST00000440027 2061 ntTSL 2 BASIC12.93□□□□□ -0.34
TRBV7-7A0A0K0K1E9 CDH22-201ENST00000372262 3661 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
TRBV7-7A0A0K0K1E9 TBC1D4-204ENST00000431480 6347 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
TRBV7-7A0A0K0K1E9 EWSR1-207ENST00000406548 2207 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
TRBV7-7A0A0K0K1E9 ZFAND2B-201ENST00000289528 1314 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
TRBV7-7A0A0K0K1E9 DAGLB-204ENST00000436575 2385 ntTSL 2 BASIC12.93□□□□□ -0.34
TRBV7-7A0A0K0K1E9 NOP14-204ENST00000502735 2723 ntAPPRIS ALT2 TSL 5 BASIC12.93□□□□□ -0.34
TRBV7-7A0A0K0K1E9 MON1A-202ENST00000417270 2527 ntAPPRIS ALT2 TSL 5 BASIC12.93□□□□□ -0.34
TRBV7-7A0A0K0K1E9 FAM76B-204ENST00000536839 2546 ntAPPRIS ALT1 TSL 5 BASIC12.93□□□□□ -0.34
TRBV7-7A0A0K0K1E9 RBM42-203ENST00000588161 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC12.93□□□□□ -0.34
TRBV7-7A0A0K0K1E9 ZBTB47-202ENST00000505904 2456 ntTSL 5 BASIC12.93□□□□□ -0.34
TRBV7-7A0A0K0K1E9 GBX1-201ENST00000297537 1092 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
TRBV7-7A0A0K0K1E9 SDHAF1-201ENST00000378887 1117 ntAPPRIS P1 BASIC12.93□□□□□ -0.34
TRBV7-7A0A0K0K1E9 TBX2-AS1-203ENST00000590421 861 ntTSL 2 BASIC12.93□□□□□ -0.34
TRBV7-7A0A0K0K1E9 HOMER3-207ENST00000594794 903 ntTSL 5 BASIC12.93□□□□□ -0.34
TRBV7-7A0A0K0K1E9 C21orf58-203ENST00000397680 2624 ntAPPRIS ALT2 TSL 2 BASIC12.93□□□□□ -0.34
TRBV7-7A0A0K0K1E9 AL049796.1-201ENST00000565336 1766 ntBASIC12.93□□□□□ -0.34
TRBV7-7A0A0K0K1E9 DACT2-201ENST00000366795 2942 ntAPPRIS P3 TSL 2 BASIC12.93□□□□□ -0.34
TRBV7-7A0A0K0K1E9 DAG1-221ENST00000541308 5676 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
TRBV7-7A0A0K0K1E9 CCKBR-206ENST00000532715 1734 ntTSL 3 BASIC12.93□□□□□ -0.34
TRBV7-7A0A0K0K1E9 SCNN1D-201ENST00000325425 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
TRBV7-7A0A0K0K1E9 TP53RK-201ENST00000372102 2012 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
TRBV7-7A0A0K0K1E9 SLC1A5-205ENST00000594991 2031 ntTSL 2 BASIC12.93□□□□□ -0.34
TRBV7-7A0A0K0K1E9 LINC00472-203ENST00000426635 2958 ntTSL 2 BASIC12.93□□□□□ -0.34
TRBV7-7A0A0K0K1E9 ZNF517-201ENST00000359971 2335 ntAPPRIS P1 TSL 4 BASIC12.93□□□□□ -0.34
TRBV7-7A0A0K0K1E9 RASL11B-201ENST00000248706 1995 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
TRBV7-7A0A0K0K1E9 PTPN5-202ENST00000396166 2299 ntTSL 2 BASIC12.92□□□□□ -0.34
TRBV7-7A0A0K0K1E9 RPP25-201ENST00000322177 3049 ntAPPRIS P1 BASIC12.92□□□□□ -0.34
TRBV7-7A0A0K0K1E9 ODF3L2-201ENST00000315489 1604 ntAPPRIS P2 TSL 1 (best) BASIC12.92□□□□□ -0.34
TRBV7-7A0A0K0K1E9 CRLF1-201ENST00000392386 1792 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
TRBV7-7A0A0K0K1E9 RTKN-201ENST00000233330 2220 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
TRBV7-7A0A0K0K1E9 KAT5-203ENST00000377046 2237 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
TRBV7-7A0A0K0K1E9 PCDHA1-202ENST00000394633 2204 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
TRBV7-7A0A0K0K1E9 TFEB-201ENST00000230323 2354 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
TRBV7-7A0A0K0K1E9 FBLN1-204ENST00000402984 2355 ntTSL 5 BASIC12.92□□□□□ -0.34
TRBV7-7A0A0K0K1E9 AC090340.1-201ENST00000620778 4980 ntBASIC12.92□□□□□ -0.34
TRBV7-7A0A0K0K1E9 NKX2-8-201ENST00000258829 1261 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
TRBV7-7A0A0K0K1E9 RHOT1-202ENST00000354266 2919 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
TRBV7-7A0A0K0K1E9 PPP1R3F-203ENST00000466508 1885 ntTSL 2 BASIC12.92□□□□□ -0.34
TRBV7-7A0A0K0K1E9 SEC11C-204ENST00000587834 1202 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
TRBV7-7A0A0K0K1E9 HSD17B1P1-201ENST00000590052 955 ntBASIC12.92□□□□□ -0.34
TRBV7-7A0A0K0K1E9 AC064853.2-201ENST00000641246 144 ntAPPRIS P1 BASIC12.92□□□□□ -0.34
TRBV7-7A0A0K0K1E9 SETD3-202ENST00000331768 2878 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
TRBV7-7A0A0K0K1E9 CCDC91-220ENST00000545336 2738 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
TRBV7-7A0A0K0K1E9 SLCO6A1-201ENST00000379807 2437 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
TRBV7-7A0A0K0K1E9 AMDHD1-201ENST00000266736 2260 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
TRBV7-7A0A0K0K1E9 ZC3H14-223ENST00000557607 1983 ntTSL 5 BASIC12.92□□□□□ -0.34
TRBV7-7A0A0K0K1E9 GLT8D2-205ENST00000548660 1835 ntAPPRIS P1 TSL 2 BASIC12.92□□□□□ -0.34
TRBV7-7A0A0K0K1E9 KANSL1-202ENST00000432791 5343 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
TRBV7-7A0A0K0K1E9 AC018470.1-201ENST00000624790 3129 ntBASIC12.92□□□□□ -0.34
Retrieved 100 of 98,524 protein–RNA pairs in 19.9 ms