Protein–RNA interactions for Protein: A0A0C4DH34

IGHV4-28, Immunoglobulin heavy variable 4-28, humanhuman

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV4-28A0A0C4DH34 KCNQ5-202ENST00000355194 6566 ntAPPRIS ALT1 TSL 5 BASIC14.76□□□□□ -0.05
IGHV4-28A0A0C4DH34 KCNQ5-206ENST00000402622 6596 ntAPPRIS ALT2 TSL 5 BASIC14.76□□□□□ -0.05
IGHV4-28A0A0C4DH34 PSPN-201ENST00000245810 471 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
IGHV4-28A0A0C4DH34 KRTAP5-8-201ENST00000398534 1183 ntAPPRIS P1 BASIC14.76□□□□□ -0.05
IGHV4-28A0A0C4DH34 GNAS-AS1-201ENST00000424094 1156 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
IGHV4-28A0A0C4DH34 AKAIN1-201ENST00000434239 575 ntAPPRIS P1 TSL 2 BASIC14.76□□□□□ -0.05
IGHV4-28A0A0C4DH34 ZNRF2P2-202ENST00000442865 590 ntTSL 4 BASIC14.76□□□□□ -0.05
IGHV4-28A0A0C4DH34 FBXL8-203ENST00000518148 1054 ntTSL 2 BASIC14.76□□□□□ -0.05
IGHV4-28A0A0C4DH34 C17orf107-202ENST00000521575 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
IGHV4-28A0A0C4DH34 NDUFB10-204ENST00000569148 628 ntTSL 2 BASIC14.76□□□□□ -0.05
IGHV4-28A0A0C4DH34 ANAPC11-208ENST00000572851 686 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
IGHV4-28A0A0C4DH34 ANAPC11-212ENST00000577425 603 ntTSL 3 BASIC14.76□□□□□ -0.05
IGHV4-28A0A0C4DH34 YIF1B-213ENST00000591755 1077 ntTSL 2 BASIC14.76□□□□□ -0.05
IGHV4-28A0A0C4DH34 PTMS-207ENST00000619580 1150 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
IGHV4-28A0A0C4DH34 MADCAM1-201ENST00000215637 1572 ntAPPRIS P4 TSL 1 (best) BASIC14.76□□□□□ -0.05
IGHV4-28A0A0C4DH34 GUSB-201ENST00000304895 2300 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
IGHV4-28A0A0C4DH34 RASSF1-203ENST00000359365 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC14.76□□□□□ -0.05
IGHV4-28A0A0C4DH34 NAE1-203ENST00000379463 1909 ntTSL 2 BASIC14.76□□□□□ -0.05
IGHV4-28A0A0C4DH34 HNRNPLL-204ENST00000409328 1908 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
IGHV4-28A0A0C4DH34 SBK1-201ENST00000341901 4992 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
IGHV4-28A0A0C4DH34 GOLGA4-212ENST00000617480 1545 ntTSL 5 BASIC14.76□□□□□ -0.05
IGHV4-28A0A0C4DH34 RNF38-204ENST00000357058 5254 ntAPPRIS P1 TSL 5 BASIC14.76□□□□□ -0.05
IGHV4-28A0A0C4DH34 BORCS8-MEF2B-202ENST00000444486 1492 ntAPPRIS P2 TSL 2 BASIC14.76□□□□□ -0.05
IGHV4-28A0A0C4DH34 FUZ-212ENST00000528094 1479 ntTSL 2 BASIC14.76□□□□□ -0.05
IGHV4-28A0A0C4DH34 AC008687.4-201ENST00000637680 1485 ntAPPRIS P1 TSL 5 BASIC14.76□□□□□ -0.05
IGHV4-28A0A0C4DH34 PKIB-206ENST00000392490 1811 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
IGHV4-28A0A0C4DH34 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC14.75□□□□□ -0.05
IGHV4-28A0A0C4DH34 MATK-203ENST00000395045 2073 ntAPPRIS P4 TSL 2 BASIC14.75□□□□□ -0.05
IGHV4-28A0A0C4DH34 GCK-205ENST00000437084 1385 ntTSL 5 BASIC14.75□□□□□ -0.05
IGHV4-28A0A0C4DH34 OR10C1-203ENST00000444197 1672 ntAPPRIS P1 BASIC14.75□□□□□ -0.05
IGHV4-28A0A0C4DH34 DTWD2-203ENST00000510708 2307 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
IGHV4-28A0A0C4DH34 AC011484.1-201ENST00000377652 1995 ntBASIC14.75□□□□□ -0.05
IGHV4-28A0A0C4DH34 IKBKG-206ENST00000594239 2299 ntAPPRIS P3 TSL 1 (best) BASIC14.75□□□□□ -0.05
IGHV4-28A0A0C4DH34 RPLP0-201ENST00000228306 1257 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
IGHV4-28A0A0C4DH34 CLDN3-201ENST00000395145 1274 ntAPPRIS P1 BASIC14.75□□□□□ -0.05
IGHV4-28A0A0C4DH34 GPX1-202ENST00000419783 1146 ntAPPRIS P2 TSL 1 (best) BASIC14.75□□□□□ -0.05
IGHV4-28A0A0C4DH34 AC006252.1-201ENST00000483834 1101 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
IGHV4-28A0A0C4DH34 RNA5SP413-201ENST00000516373 109 ntBASIC14.75□□□□□ -0.05
IGHV4-28A0A0C4DH34 FADS3-204ENST00000525588 1254 ntTSL 5 BASIC14.75□□□□□ -0.05
IGHV4-28A0A0C4DH34 AC083880.1-201ENST00000608266 535 ntBASIC14.75□□□□□ -0.05
IGHV4-28A0A0C4DH34 MYC-209ENST00000641252 345 ntBASIC14.75□□□□□ -0.05
IGHV4-28A0A0C4DH34 SREBF2-209ENST00000612482 5365 ntTSL 5 BASIC14.75□□□□□ -0.05
IGHV4-28A0A0C4DH34 CHADL-201ENST00000216241 2533 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
IGHV4-28A0A0C4DH34 AGO4-201ENST00000373210 7116 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
IGHV4-28A0A0C4DH34 FBXO27-202ENST00000509137 2130 ntAPPRIS P2 TSL 1 (best) BASIC14.75□□□□□ -0.05
IGHV4-28A0A0C4DH34 SLCO3A1-202ENST00000424469 2705 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
IGHV4-28A0A0C4DH34 ARRB2-202ENST00000346341 1769 ntTSL 2 BASIC14.75□□□□□ -0.05
IGHV4-28A0A0C4DH34 LEF1-203ENST00000438313 1488 ntAPPRIS ALT1 TSL 1 (best) BASIC14.75□□□□□ -0.05
IGHV4-28A0A0C4DH34 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
IGHV4-28A0A0C4DH34 FEM1AP4-201ENST00000443167 1987 ntBASIC14.74□□□□□ -0.05
IGHV4-28A0A0C4DH34 PRKAR1B-211ENST00000537384 2533 ntAPPRIS P1 TSL 5 BASIC14.74□□□□□ -0.05
IGHV4-28A0A0C4DH34 CYB5R2-212ENST00000533558 1658 ntAPPRIS P1 TSL 2 BASIC14.74□□□□□ -0.05
IGHV4-28A0A0C4DH34 PLSCR3-213ENST00000576362 1605 ntTSL 3 BASIC14.74□□□□□ -0.05
IGHV4-28A0A0C4DH34 FBXO31-201ENST00000311635 5934 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
IGHV4-28A0A0C4DH34 TMCO6-203ENST00000394671 1887 ntAPPRIS P1 TSL 2 BASIC14.74□□□□□ -0.05
IGHV4-28A0A0C4DH34 SQLE-206ENST00000523430 1879 ntTSL 2 BASIC14.74□□□□□ -0.05
IGHV4-28A0A0C4DH34 DCBLD2-201ENST00000326840 6122 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
IGHV4-28A0A0C4DH34 MYH14-208ENST00000598205 6137 ntAPPRIS P3 TSL 5 BASIC14.74□□□□□ -0.05
IGHV4-28A0A0C4DH34 QTRT1-201ENST00000250237 1317 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
IGHV4-28A0A0C4DH34 SLC35D3-201ENST00000331858 2359 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
IGHV4-28A0A0C4DH34 LCK-214ENST00000619559 2099 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
IGHV4-28A0A0C4DH34 ETHE1-201ENST00000292147 963 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
IGHV4-28A0A0C4DH34 PGM5P4-201ENST00000421970 445 ntBASIC14.74□□□□□ -0.05
IGHV4-28A0A0C4DH34 AL691442.1-201ENST00000505139 1042 ntAPPRIS P1 TSL 2 BASIC14.74□□□□□ -0.05
IGHV4-28A0A0C4DH34 UNC93B6-201ENST00000525262 1143 ntTSL 5 BASIC14.74□□□□□ -0.05
IGHV4-28A0A0C4DH34 AC034102.6-201ENST00000550947 559 ntTSL 4 BASIC14.74□□□□□ -0.05
IGHV4-28A0A0C4DH34 AC092143.2-201ENST00000554623 985 ntTSL 3 BASIC14.74□□□□□ -0.05
IGHV4-28A0A0C4DH34 PSME3-210ENST00000590720 998 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
IGHV4-28A0A0C4DH34 NAPSA-201ENST00000253719 1548 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
IGHV4-28A0A0C4DH34 DDAH1-205ENST00000539042 1519 ntAPPRIS P1 TSL 5 BASIC14.74□□□□□ -0.05
IGHV4-28A0A0C4DH34 EXTL3-213ENST00000523149 1779 ntTSL 5 BASIC14.74□□□□□ -0.05
IGHV4-28A0A0C4DH34 SLC9A3R1-201ENST00000262613 1969 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
IGHV4-28A0A0C4DH34 CENPU-201ENST00000281453 1998 ntAPPRIS P2 TSL 1 (best) BASIC14.74□□□□□ -0.05
IGHV4-28A0A0C4DH34 RHBDL1-202ENST00000352681 1463 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
IGHV4-28A0A0C4DH34 MAST1-208ENST00000591495 1496 ntTSL 5 BASIC14.74□□□□□ -0.05
IGHV4-28A0A0C4DH34 ILDR2-206ENST00000528703 2446 ntAPPRIS ALT2 TSL 5 BASIC14.74□□□□□ -0.05
IGHV4-28A0A0C4DH34 CPEB1-218ENST00000620182 2422 ntTSL 2 BASIC14.74□□□□□ -0.05
IGHV4-28A0A0C4DH34 ELL3-201ENST00000319359 2352 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
IGHV4-28A0A0C4DH34 UNC93B1-201ENST00000227471 2316 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
IGHV4-28A0A0C4DH34 PNKP-215ENST00000600910 1600 ntTSL 5 BASIC14.74□□□□□ -0.05
IGHV4-28A0A0C4DH34 SH2B1-204ENST00000395532 2529 ntAPPRIS P1 TSL 2 BASIC14.73□□□□□ -0.05
IGHV4-28A0A0C4DH34 IKBIP-203ENST00000393042 1368 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
IGHV4-28A0A0C4DH34 SPHK2-213ENST00000601712 1394 ntAPPRIS ALT2 TSL 5 BASIC14.73□□□□□ -0.05
IGHV4-28A0A0C4DH34 EPHX3-201ENST00000221730 1822 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
IGHV4-28A0A0C4DH34 PRKRA-201ENST00000325748 1826 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
IGHV4-28A0A0C4DH34 SARDH-203ENST00000371868 2266 ntTSL 2 BASIC14.73□□□□□ -0.05
IGHV4-28A0A0C4DH34 PCSK6-217ENST00000618548 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
IGHV4-28A0A0C4DH34 SLC18A3-201ENST00000374115 2420 ntAPPRIS P1 BASIC14.73□□□□□ -0.05
IGHV4-28A0A0C4DH34 ZNF534-201ENST00000301085 1525 ntTSL 2 BASIC14.73□□□□□ -0.05
IGHV4-28A0A0C4DH34 YBX3-202ENST00000279550 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
IGHV4-28A0A0C4DH34 OLIG2-202ENST00000382357 2578 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
IGHV4-28A0A0C4DH34 OSR1-201ENST00000272223 1936 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
IGHV4-28A0A0C4DH34 IFI6-202ENST00000361157 841 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
IGHV4-28A0A0C4DH34 GUK1-209ENST00000366730 937 ntAPPRIS P3 TSL 3 BASIC14.73□□□□□ -0.05
IGHV4-28A0A0C4DH34 CSF1-205ENST00000420111 1083 ntTSL 5 BASIC14.73□□□□□ -0.05
IGHV4-28A0A0C4DH34 ASMTL-AS1-203ENST00000425740 840 ntTSL 2 BASIC14.73□□□□□ -0.05
IGHV4-28A0A0C4DH34 AP000282.1-201ENST00000454622 682 ntTSL 2 BASIC14.73□□□□□ -0.05
IGHV4-28A0A0C4DH34 HES2-205ENST00000487437 968 ntTSL 3 BASIC14.73□□□□□ -0.05
IGHV4-28A0A0C4DH34 RRAS2-203ENST00000526063 970 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
IGHV4-28A0A0C4DH34 RRAS2-208ENST00000532814 982 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 21.5 ms