Protein–RNA interactions for Protein: A0A0B4J279

TRAV21, T-cell receptor alpha variable 21 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV21A0A0B4J279 PCGF3-202ENST00000400151 1175 ntTSL 2 BASIC15.17■□□□□ 0.02
TRAV21A0A0B4J279 PLPP5-201ENST00000419686 794 ntTSL 2 BASIC15.17■□□□□ 0.02
TRAV21A0A0B4J279 VGLL4-208ENST00000424529 1025 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
TRAV21A0A0B4J279 AC245052.3-201ENST00000450182 901 ntBASIC15.17■□□□□ 0.02
TRAV21A0A0B4J279 AP2S1-203ENST00000593442 636 ntTSL 2 BASIC15.17■□□□□ 0.02
TRAV21A0A0B4J279 FAM71E1-204ENST00000600100 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
TRAV21A0A0B4J279 MAPK9-201ENST00000343111 4369 ntTSL 5 BASIC15.17■□□□□ 0.02
TRAV21A0A0B4J279 IRX5-202ENST00000394636 2401 ntAPPRIS P3 TSL 3 BASIC15.17■□□□□ 0.02
TRAV21A0A0B4J279 AL512408.1-201ENST00000569378 2000 ntBASIC15.17■□□□□ 0.02
TRAV21A0A0B4J279 IVD-206ENST00000487418 1809 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
TRAV21A0A0B4J279 DPF1-201ENST00000355526 1632 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
TRAV21A0A0B4J279 FAM43B-201ENST00000332947 2572 ntAPPRIS P1 BASIC15.17■□□□□ 0.02
TRAV21A0A0B4J279 UBTD2-201ENST00000393792 3301 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
TRAV21A0A0B4J279 LINC00969-219ENST00000453324 1439 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
TRAV21A0A0B4J279 ARHGEF28-204ENST00000437974 5792 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
TRAV21A0A0B4J279 ILKAP-211ENST00000612675 1335 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
TRAV21A0A0B4J279 SLC39A5-209ENST00000454355 1968 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
TRAV21A0A0B4J279 RASL12-201ENST00000220062 2640 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
TRAV21A0A0B4J279 SUSD1-202ENST00000374263 2973 ntAPPRIS ALT2 TSL 2 BASIC15.16■□□□□ 0.02
TRAV21A0A0B4J279 RBL2-201ENST00000262133 4906 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
TRAV21A0A0B4J279 MCUR1-201ENST00000379170 5471 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
TRAV21A0A0B4J279 DYNC1LI2-201ENST00000258198 4515 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
TRAV21A0A0B4J279 TNPO2-203ENST00000450764 4993 ntAPPRIS ALT1 TSL 1 (best) BASIC15.16■□□□□ 0.02
TRAV21A0A0B4J279 PRKCD-202ENST00000394729 2810 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
TRAV21A0A0B4J279 STX10-202ENST00000343587 1128 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
TRAV21A0A0B4J279 YTHDF1-201ENST00000370334 747 ntTSL 3 BASIC15.16■□□□□ 0.02
TRAV21A0A0B4J279 CDC37L1-202ENST00000381858 1244 ntTSL 5 BASIC15.16■□□□□ 0.02
TRAV21A0A0B4J279 NT5C3AP1-201ENST00000394500 1012 ntBASIC15.16■□□□□ 0.02
TRAV21A0A0B4J279 PRKCQ-AS1-202ENST00000445427 1133 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
TRAV21A0A0B4J279 AC079140.4-201ENST00000507448 529 ntBASIC15.16■□□□□ 0.02
TRAV21A0A0B4J279 LACTB-202ENST00000413507 2978 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
TRAV21A0A0B4J279 TPST2-202ENST00000398110 1968 ntAPPRIS P1 TSL 2 BASIC15.16■□□□□ 0.02
TRAV21A0A0B4J279 TMCO6-203ENST00000394671 1887 ntAPPRIS P1 TSL 2 BASIC15.16■□□□□ 0.02
TRAV21A0A0B4J279 PKMYT1-213ENST00000574385 1892 ntAPPRIS P1 TSL 2 BASIC15.16■□□□□ 0.02
TRAV21A0A0B4J279 MSLN-205ENST00000563941 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
TRAV21A0A0B4J279 ATG4B-204ENST00000402096 1685 ntTSL 2 BASIC15.16■□□□□ 0.02
TRAV21A0A0B4J279 MEDAG-201ENST00000380482 2374 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
TRAV21A0A0B4J279 POLD2-201ENST00000223361 1597 ntTSL 5 BASIC15.15■□□□□ 0.02
TRAV21A0A0B4J279 SLC25A10-201ENST00000331531 1946 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
TRAV21A0A0B4J279 CACNB2-203ENST00000352115 1911 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
TRAV21A0A0B4J279 TMEM8A-204ENST00000431232 3691 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
TRAV21A0A0B4J279 MRPL37-206ENST00000605337 1582 ntTSL 5 BASIC15.15■□□□□ 0.02
TRAV21A0A0B4J279 YTHDF3-214ENST00000621890 2296 ntTSL 5 BASIC15.15■□□□□ 0.02
TRAV21A0A0B4J279 EPS8L1-201ENST00000201647 2536 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
TRAV21A0A0B4J279 PRKRA-201ENST00000325748 1826 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
TRAV21A0A0B4J279 KRT87P-202ENST00000534226 1464 ntBASIC15.15■□□□□ 0.02
TRAV21A0A0B4J279 MON1A-203ENST00000455683 1617 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
TRAV21A0A0B4J279 CACNA1A-201ENST00000360228 8627 ntAPPRIS P4 TSL 1 (best) BASIC15.15■□□□□ 0.02
TRAV21A0A0B4J279 KLC1-208ENST00000452929 2453 ntTSL 5 BASIC15.15■□□□□ 0.02
TRAV21A0A0B4J279 ME2-218ENST00000640965 2476 ntTSL 5 BASIC15.15■□□□□ 0.02
TRAV21A0A0B4J279 SUMF2-201ENST00000275607 1894 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
TRAV21A0A0B4J279 ADAMTS13-204ENST00000371911 1155 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
TRAV21A0A0B4J279 MTURN-203ENST00000409688 843 ntTSL 2 BASIC15.15■□□□□ 0.02
TRAV21A0A0B4J279 AC106738.1-201ENST00000560487 359 ntTSL 3 BASIC15.15■□□□□ 0.02
TRAV21A0A0B4J279 TPRG1LP1-201ENST00000598702 760 ntBASIC15.15■□□□□ 0.02
TRAV21A0A0B4J279 AL358852.1-201ENST00000623174 1268 ntBASIC15.15■□□□□ 0.02
TRAV21A0A0B4J279 MUS81-201ENST00000308110 2392 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
TRAV21A0A0B4J279 SLC41A3-201ENST00000315891 1797 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
TRAV21A0A0B4J279 USP39-204ENST00000409766 2033 ntTSL 2 BASIC15.15■□□□□ 0.02
TRAV21A0A0B4J279 SEMA6B-202ENST00000586965 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
TRAV21A0A0B4J279 IDH1-205ENST00000446179 2298 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
TRAV21A0A0B4J279 KRT16P2-201ENST00000414673 1423 ntBASIC15.15■□□□□ 0.02
TRAV21A0A0B4J279 CDV3-201ENST00000264993 3307 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
TRAV21A0A0B4J279 TBL1Y-201ENST00000346432 2312 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
TRAV21A0A0B4J279 PKMYT1-216ENST00000574730 1806 ntTSL 2 BASIC15.15■□□□□ 0.02
TRAV21A0A0B4J279 SYT8-201ENST00000341958 1556 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
TRAV21A0A0B4J279 DUX4-204ENST00000569241 1574 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
TRAV21A0A0B4J279 MAP7D2-203ENST00000443379 2476 ntAPPRIS ALT2 TSL 2 BASIC15.15■□□□□ 0.02
TRAV21A0A0B4J279 FXYD3-203ENST00000435734 1467 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
TRAV21A0A0B4J279 TPBGL-201ENST00000562197 2793 ntAPPRIS P1 BASIC15.14■□□□□ 0.01
TRAV21A0A0B4J279 RNF169-201ENST00000299563 7823 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
TRAV21A0A0B4J279 RAB5A-201ENST00000273047 2536 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
TRAV21A0A0B4J279 NEU4-202ENST00000391969 2526 ntAPPRIS P1 TSL 2 BASIC15.14■□□□□ 0.01
TRAV21A0A0B4J279 LRRC75A-203ENST00000470794 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
TRAV21A0A0B4J279 AVPR2-202ENST00000358927 1763 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
TRAV21A0A0B4J279 FAM53A-202ENST00000461064 2159 ntAPPRIS P1 TSL 2 BASIC15.14■□□□□ 0.01
TRAV21A0A0B4J279 ACVR1B-201ENST00000257963 4563 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
TRAV21A0A0B4J279 MEF2D-203ENST00000368240 1905 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
TRAV21A0A0B4J279 NFKBIE-204ENST00000619360 2327 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
TRAV21A0A0B4J279 LRCH4-211ENST00000619071 2098 ntTSL 5 BASIC15.14■□□□□ 0.01
TRAV21A0A0B4J279 HM13-AS1-201ENST00000412178 489 ntTSL 3 BASIC15.14■□□□□ 0.01
TRAV21A0A0B4J279 AGAP1-IT1-201ENST00000440498 664 ntTSL 3 BASIC15.14■□□□□ 0.01
TRAV21A0A0B4J279 AP003071.3-201ENST00000562506 366 ntTSL 3 BASIC15.14■□□□□ 0.01
TRAV21A0A0B4J279 NEDD4L-237ENST00000617539 728 ntTSL 2 BASIC15.14■□□□□ 0.01
TRAV21A0A0B4J279 PCDHAC2-203ENST00000615316 3011 ntBASIC15.14■□□□□ 0.01
TRAV21A0A0B4J279 ST3GAL4-204ENST00000444328 1812 ntAPPRIS ALT1 TSL 5 BASIC15.14■□□□□ 0.01
TRAV21A0A0B4J279 TMPRSS5-202ENST00000536856 1811 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
TRAV21A0A0B4J279 ARSE-205ENST00000540563 1990 ntTSL 2 BASIC15.14■□□□□ 0.01
TRAV21A0A0B4J279 GATA5-201ENST00000252997 2595 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
TRAV21A0A0B4J279 INPP1-202ENST00000392329 2162 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
TRAV21A0A0B4J279 ACHE-207ENST00000428317 2159 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
TRAV21A0A0B4J279 EBF1-202ENST00000380654 2345 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
TRAV21A0A0B4J279 B4GALT2-204ENST00000434555 1923 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
TRAV21A0A0B4J279 VPS53-201ENST00000291074 2656 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
TRAV21A0A0B4J279 GAS8-202ENST00000536122 1687 ntTSL 2 BASIC15.13■□□□□ 0.01
TRAV21A0A0B4J279 TSHZ3-201ENST00000240587 5176 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
TRAV21A0A0B4J279 MAPK15-201ENST00000338033 1961 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
TRAV21A0A0B4J279 ASB16-201ENST00000293414 2139 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
TRAV21A0A0B4J279 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
TRAV21A0A0B4J279 RALY-203ENST00000375114 6430 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 28.2 ms