Protein–RNA interactions for Protein: A0A0B4J275

TRAV17, T-cell receptor alpha variable 17 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV17A0A0B4J275 CD55-203ENST00000367063 1691 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
TRAV17A0A0B4J275 PANO1-201ENST00000620120 1680 ntAPPRIS P1 BASIC18.55■□□□□ 0.56
TRAV17A0A0B4J275 PRSS57-201ENST00000329267 1025 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
TRAV17A0A0B4J275 RHOG-202ENST00000396978 1066 ntAPPRIS P1 TSL 3 BASIC18.55■□□□□ 0.56
TRAV17A0A0B4J275 AC239809.2-201ENST00000415381 517 ntBASIC18.55■□□□□ 0.56
TRAV17A0A0B4J275 ELF3-AS1-202ENST00000419190 788 ntTSL 2 BASIC18.55■□□□□ 0.56
TRAV17A0A0B4J275 THEM4-205ENST00000489410 643 ntTSL 2 BASIC18.55■□□□□ 0.56
TRAV17A0A0B4J275 ANP32AP1-202ENST00000560832 1074 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
TRAV17A0A0B4J275 CIRBP-213ENST00000587323 1092 ntTSL 5 BASIC18.55■□□□□ 0.56
TRAV17A0A0B4J275 AC008750.8-201ENST00000600067 551 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
TRAV17A0A0B4J275 Z99916.2-201ENST00000604037 246 ntBASIC18.55■□□□□ 0.56
TRAV17A0A0B4J275 PRSS57-202ENST00000613411 1090 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
TRAV17A0A0B4J275 DR1-201ENST00000370267 1647 ntAPPRIS P1 TSL 2 BASIC18.55■□□□□ 0.56
TRAV17A0A0B4J275 COPS7A-208ENST00000538410 1610 ntTSL 3 BASIC18.55■□□□□ 0.56
TRAV17A0A0B4J275 TARSL2-207ENST00000615656 2356 ntAPPRIS ALT2 TSL 5 BASIC18.55■□□□□ 0.56
TRAV17A0A0B4J275 AC011484.1-201ENST00000377652 1995 ntBASIC18.55■□□□□ 0.56
TRAV17A0A0B4J275 NTSR2-201ENST00000306928 1569 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
TRAV17A0A0B4J275 TSPAN3-210ENST00000561277 1592 ntTSL 5 BASIC18.55■□□□□ 0.56
TRAV17A0A0B4J275 DYM-203ENST00000442713 2147 ntTSL 2 BASIC18.55■□□□□ 0.56
TRAV17A0A0B4J275 FAM3A-202ENST00000359889 1712 ntAPPRIS P1 TSL 2 BASIC18.54■□□□□ 0.56
TRAV17A0A0B4J275 PTPRJ-208ENST00000615445 4773 ntAPPRIS ALT2 TSL 5 BASIC18.54■□□□□ 0.56
TRAV17A0A0B4J275 C21orf2-202ENST00000339818 2233 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
TRAV17A0A0B4J275 CDKN2B-AS1-217ENST00000585267 1337 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
TRAV17A0A0B4J275 KCNK17-201ENST00000373231 1658 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
TRAV17A0A0B4J275 PXK-211ENST00000484288 2031 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
TRAV17A0A0B4J275 TFG-201ENST00000240851 1978 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
TRAV17A0A0B4J275 CNRIP1-201ENST00000263655 1953 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
TRAV17A0A0B4J275 RNF39-202ENST00000376751 1970 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
TRAV17A0A0B4J275 ABHD14A-201ENST00000273596 1062 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
TRAV17A0A0B4J275 LYPD1-201ENST00000345008 1033 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
TRAV17A0A0B4J275 NKAIN4-201ENST00000370307 793 ntTSL 5 BASIC18.54■□□□□ 0.56
TRAV17A0A0B4J275 A3GALT2-201ENST00000442999 1023 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
TRAV17A0A0B4J275 AC133681.1-201ENST00000465482 601 ntBASIC18.54■□□□□ 0.56
TRAV17A0A0B4J275 AP001458.2-201ENST00000528405 577 ntAPPRIS P1 TSL 4 BASIC18.54■□□□□ 0.56
TRAV17A0A0B4J275 OPA3-203ENST00000544371 1146 ntTSL 2 BASIC18.54■□□□□ 0.56
TRAV17A0A0B4J275 LINC00654-202ENST00000589201 579 ntTSL 3 BASIC18.54■□□□□ 0.56
TRAV17A0A0B4J275 SLC38A7-205ENST00000564010 1437 ntTSL 2 BASIC18.54■□□□□ 0.56
TRAV17A0A0B4J275 TMEM25-205ENST00000411589 2442 ntAPPRIS ALT2 TSL 2 BASIC18.54■□□□□ 0.56
TRAV17A0A0B4J275 RNH1-206ENST00000438658 1725 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
TRAV17A0A0B4J275 TSSC4-203ENST00000380996 1544 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
TRAV17A0A0B4J275 MOK-233ENST00000524214 1539 ntTSL 2 BASIC18.54■□□□□ 0.56
TRAV17A0A0B4J275 RNF8-204ENST00000469731 1800 ntTSL 5 BASIC18.53■□□□□ 0.56
TRAV17A0A0B4J275 BAZ1A-202ENST00000360310 6010 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
TRAV17A0A0B4J275 CEACAM3-202ENST00000357396 1316 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
TRAV17A0A0B4J275 FAM58A-204ENST00000576892 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
TRAV17A0A0B4J275 FNDC10-201ENST00000422725 2085 ntAPPRIS P1 BASIC18.53■□□□□ 0.56
TRAV17A0A0B4J275 YBX3-202ENST00000279550 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
TRAV17A0A0B4J275 CLTA-202ENST00000345519 1073 ntAPPRIS ALT1 TSL 1 (best) BASIC18.53■□□□□ 0.56
TRAV17A0A0B4J275 HOXB-AS3-204ENST00000466037 522 ntTSL 3 BASIC18.53■□□□□ 0.56
TRAV17A0A0B4J275 ZNF467-202ENST00000484747 913 ntTSL 2 BASIC18.53■□□□□ 0.56
TRAV17A0A0B4J275 YKT6-207ENST00000496112 1270 ntTSL 2 BASIC18.53■□□□□ 0.56
TRAV17A0A0B4J275 LY6E-205ENST00000519611 635 ntTSL 3 BASIC18.53■□□□□ 0.56
TRAV17A0A0B4J275 BAALC-AS1-206ENST00000521383 736 ntTSL 3 BASIC18.53■□□□□ 0.56
TRAV17A0A0B4J275 LY6E-212ENST00000522024 868 ntAPPRIS P2 TSL 5 BASIC18.53■□□□□ 0.56
TRAV17A0A0B4J275 TMEM191C-212ENST00000536718 480 ntAPPRIS ALT2 TSL 5 BASIC18.53■□□□□ 0.56
TRAV17A0A0B4J275 AC097641.1-201ENST00000580671 588 ntTSL 4 BASIC18.53■□□□□ 0.56
TRAV17A0A0B4J275 AC122129.2-201ENST00000583598 466 ntTSL 5 BASIC18.53■□□□□ 0.56
TRAV17A0A0B4J275 JOSD2-202ENST00000595669 733 ntTSL 2 BASIC18.53■□□□□ 0.56
TRAV17A0A0B4J275 AL023875.1-201ENST00000640777 796 ntBASIC18.53■□□□□ 0.56
TRAV17A0A0B4J275 PLPP5-203ENST00000424479 2130 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
TRAV17A0A0B4J275 WT1-204ENST00000448076 2114 ntAPPRIS ALT2 TSL 2 BASIC18.53■□□□□ 0.56
TRAV17A0A0B4J275 PALM-207ENST00000590161 2137 ntTSL 4 BASIC18.53■□□□□ 0.56
TRAV17A0A0B4J275 PSIP1-201ENST00000380715 1966 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
TRAV17A0A0B4J275 HOXA11-AS-204ENST00000522674 1549 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
TRAV17A0A0B4J275 TSPAN14-203ENST00000372156 1380 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
TRAV17A0A0B4J275 ST8SIA1-204ENST00000404299 1920 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
TRAV17A0A0B4J275 MAGED2-206ENST00000375068 2189 ntAPPRIS P2 TSL 1 (best) BASIC18.52■□□□□ 0.56
TRAV17A0A0B4J275 TPRN-202ENST00000409012 2718 ntAPPRIS P2 TSL 1 (best) BASIC18.52■□□□□ 0.56
TRAV17A0A0B4J275 DNAJC25-201ENST00000313525 2268 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
TRAV17A0A0B4J275 SETD6-201ENST00000219315 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
TRAV17A0A0B4J275 TSSC4-207ENST00000451491 1423 ntAPPRIS P3 TSL 1 (best) BASIC18.52■□□□□ 0.56
TRAV17A0A0B4J275 SMARCD2-201ENST00000225742 1800 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
TRAV17A0A0B4J275 FBL-201ENST00000221801 1160 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
TRAV17A0A0B4J275 COX7A2L-201ENST00000234301 1112 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
TRAV17A0A0B4J275 RAC3-201ENST00000306897 1090 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
TRAV17A0A0B4J275 H3F3A-204ENST00000366816 799 ntAPPRIS P1 TSL 3 BASIC18.52■□□□□ 0.56
TRAV17A0A0B4J275 TCEAL6-202ENST00000372774 1106 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
TRAV17A0A0B4J275 NRXN2-203ENST00000377551 6373 ntAPPRIS P3 TSL 1 (best) BASIC18.52■□□□□ 0.56
TRAV17A0A0B4J275 AC012618.2-201ENST00000428058 849 ntBASIC18.52■□□□□ 0.56
TRAV17A0A0B4J275 AL929601.1-201ENST00000551565 573 ntTSL 4 BASIC18.52■□□□□ 0.56
TRAV17A0A0B4J275 AC090877.2-202ENST00000560363 574 ntTSL 2 BASIC18.52■□□□□ 0.56
TRAV17A0A0B4J275 FBXO17-202ENST00000595329 1299 ntAPPRIS P1 TSL 2 BASIC18.52■□□□□ 0.56
TRAV17A0A0B4J275 NCBP2-AS2-201ENST00000602845 918 ntAPPRIS P1 BASIC18.52■□□□□ 0.56
TRAV17A0A0B4J275 AC124016.1-201ENST00000609552 612 ntBASIC18.52■□□□□ 0.56
TRAV17A0A0B4J275 CCSER2-202ENST00000359979 2066 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
TRAV17A0A0B4J275 VEGFB-201ENST00000309422 1380 ntAPPRIS P3 TSL 1 (best) BASIC18.52■□□□□ 0.55
TRAV17A0A0B4J275 HIGD1A-201ENST00000321331 1373 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
TRAV17A0A0B4J275 PDXDC1-205ENST00000535621 2048 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
TRAV17A0A0B4J275 FAM167A-207ENST00000534308 1642 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
TRAV17A0A0B4J275 ARRB2-201ENST00000269260 1895 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
TRAV17A0A0B4J275 ZDHHC16-202ENST00000352634 1718 ntAPPRIS ALT1 TSL 1 (best) BASIC18.52■□□□□ 0.55
TRAV17A0A0B4J275 C20orf27-201ENST00000217195 1302 ntTSL 2 BASIC18.51■□□□□ 0.55
TRAV17A0A0B4J275 GPR108-201ENST00000264080 2057 ntAPPRIS P2 TSL 1 (best) BASIC18.51■□□□□ 0.55
TRAV17A0A0B4J275 RFXANK-201ENST00000303088 1407 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
TRAV17A0A0B4J275 KAT5-201ENST00000341318 2296 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
TRAV17A0A0B4J275 ATP9A-202ENST00000338821 8106 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
TRAV17A0A0B4J275 RFLNA-201ENST00000324038 2148 ntAPPRIS P2 TSL 2 BASIC18.51■□□□□ 0.55
TRAV17A0A0B4J275 ZNF436-AS1-202ENST00000437367 606 ntTSL 2 BASIC18.51■□□□□ 0.55
TRAV17A0A0B4J275 SNORA78-201ENST00000459373 127 ntBASIC18.51■□□□□ 0.55
TRAV17A0A0B4J275 CAMLG-202ENST00000514518 895 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 11.6 ms