Protein–RNA interactions for Protein: A0A0B4J266

TRAV41, T-cell receptor alpha variable 41 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV41A0A0B4J266 NFYC-204ENST00000372653 1862 ntTSL 2 BASIC16.08■□□□□ 0.16
TRAV41A0A0B4J266 ITGB1BP1-202ENST00000355346 1963 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
TRAV41A0A0B4J266 LRCH4-209ENST00000497245 2014 ntTSL 5 BASIC16.07■□□□□ 0.16
TRAV41A0A0B4J266 DIAPH1-203ENST00000389057 5762 ntAPPRIS ALT2 TSL 5 BASIC16.07■□□□□ 0.16
TRAV41A0A0B4J266 UBE2C-201ENST00000243893 476 ntTSL 2 BASIC16.07■□□□□ 0.16
TRAV41A0A0B4J266 TMPO-201ENST00000261210 820 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
TRAV41A0A0B4J266 GCC2-AS1-201ENST00000322353 558 ntTSL 2 BASIC16.07■□□□□ 0.16
TRAV41A0A0B4J266 HAGH-201ENST00000397353 1257 ntAPPRIS ALT1 TSL 5 BASIC16.07■□□□□ 0.16
TRAV41A0A0B4J266 TSPY6P-201ENST00000448518 926 ntBASIC16.07■□□□□ 0.16
TRAV41A0A0B4J266 PRELID2-204ENST00000505416 738 ntAPPRIS P2 TSL 3 BASIC16.07■□□□□ 0.16
TRAV41A0A0B4J266 SCO2-203ENST00000535425 1002 ntAPPRIS P1 TSL 2 BASIC16.07■□□□□ 0.16
TRAV41A0A0B4J266 CAMTA1-216ENST00000557126 486 ntTSL 2 BASIC16.07■□□□□ 0.16
TRAV41A0A0B4J266 CIRBP-214ENST00000587896 1081 ntTSL 2 BASIC16.07■□□□□ 0.16
TRAV41A0A0B4J266 AC016588.1-201ENST00000591533 542 ntTSL 4 BASIC16.07■□□□□ 0.16
TRAV41A0A0B4J266 CYP2T3P-201ENST00000601990 817 ntBASIC16.07■□□□□ 0.16
TRAV41A0A0B4J266 FXYD3-203ENST00000435734 1467 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
TRAV41A0A0B4J266 CDC123-201ENST00000281141 1542 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
TRAV41A0A0B4J266 PTX4-203ENST00000447419 1516 ntAPPRIS ALT2 TSL 5 BASIC16.07■□□□□ 0.16
TRAV41A0A0B4J266 SLC25A24P1-201ENST00000411846 1569 ntTSL 5 BASIC16.07■□□□□ 0.16
TRAV41A0A0B4J266 FAM151B-201ENST00000282226 1717 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
TRAV41A0A0B4J266 OTUB1-209ENST00000538426 1729 ntAPPRIS P2 TSL 1 (best) BASIC16.07■□□□□ 0.16
TRAV41A0A0B4J266 FAM3A-208ENST00000419205 1763 ntTSL 2 BASIC16.07■□□□□ 0.16
TRAV41A0A0B4J266 NDUFAF3-202ENST00000326925 2012 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
TRAV41A0A0B4J266 ZFP69B-202ENST00000411995 2109 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
TRAV41A0A0B4J266 FLT1-207ENST00000615840 6453 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
TRAV41A0A0B4J266 BID-215ENST00000622694 2199 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
TRAV41A0A0B4J266 TOLLIP-201ENST00000263646 2283 ntTSL 5 BASIC16.07■□□□□ 0.16
TRAV41A0A0B4J266 UGP2-201ENST00000337130 2338 ntAPPRIS P2 TSL 1 (best) BASIC16.07■□□□□ 0.16
TRAV41A0A0B4J266 UBE2J2-201ENST00000347370 2387 ntTSL 3 BASIC16.07■□□□□ 0.16
TRAV41A0A0B4J266 LSM11-201ENST00000286307 6584 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
TRAV41A0A0B4J266 CCDC88B-203ENST00000359902 2326 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
TRAV41A0A0B4J266 EFHD1-201ENST00000264059 2259 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
TRAV41A0A0B4J266 SLC35A3-210ENST00000638371 2298 ntTSL 5 BASIC16.06■□□□□ 0.16
TRAV41A0A0B4J266 C7orf26-201ENST00000344417 2182 ntAPPRIS P1 TSL 2 BASIC16.06■□□□□ 0.16
TRAV41A0A0B4J266 SMIM11B-205ENST00000624304 1863 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
TRAV41A0A0B4J266 GPR162-203ENST00000428545 1610 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
TRAV41A0A0B4J266 MFSD7-204ENST00000503156 1632 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
TRAV41A0A0B4J266 PGPEP1L-202ENST00000535714 1483 ntTSL 2 BASIC16.06■□□□□ 0.16
TRAV41A0A0B4J266 NFS1-201ENST00000306750 738 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
TRAV41A0A0B4J266 ID1-201ENST00000376105 1233 ntBASIC16.06■□□□□ 0.16
TRAV41A0A0B4J266 KRT18P68-201ENST00000392293 1000 ntBASIC16.06■□□□□ 0.16
TRAV41A0A0B4J266 ART5-202ENST00000397067 1154 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
TRAV41A0A0B4J266 AL355472.2-201ENST00000422958 438 ntBASIC16.06■□□□□ 0.16
TRAV41A0A0B4J266 STAG3L3-201ENST00000423834 1262 ntTSL 2 BASIC16.06■□□□□ 0.16
TRAV41A0A0B4J266 TPT1-AS1-210ENST00000520590 873 ntTSL 5 BASIC16.06■□□□□ 0.16
TRAV41A0A0B4J266 JOSD2-205ENST00000601423 802 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
TRAV41A0A0B4J266 PFKL-212ENST00000628044 129 ntTSL 3 BASIC16.06■□□□□ 0.16
TRAV41A0A0B4J266 MIR2861-201ENST00000636310 90 ntBASIC16.06■□□□□ 0.16
TRAV41A0A0B4J266 EFS-203ENST00000429593 2610 ntTSL 2 BASIC16.06■□□□□ 0.16
TRAV41A0A0B4J266 RABL2B-206ENST00000395598 2169 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
TRAV41A0A0B4J266 CNTNAP3B-212ENST00000617422 2170 ntTSL 2 BASIC16.06■□□□□ 0.16
TRAV41A0A0B4J266 HFE2-202ENST00000357836 2123 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
TRAV41A0A0B4J266 LAYN-202ENST00000375615 1836 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
TRAV41A0A0B4J266 VCPKMT-202ENST00000395860 1761 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
TRAV41A0A0B4J266 SMPDL3A-203ENST00000539041 1755 ntTSL 2 BASIC16.05■□□□□ 0.16
TRAV41A0A0B4J266 DALRD3-202ENST00000341949 1739 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
TRAV41A0A0B4J266 AL161756.1-202ENST00000359491 1717 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
TRAV41A0A0B4J266 KCNK17-202ENST00000453413 1706 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
TRAV41A0A0B4J266 TRABD-204ENST00000395829 1628 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
TRAV41A0A0B4J266 SMUG1-202ENST00000337581 1571 ntAPPRIS P1 TSL 2 BASIC16.05■□□□□ 0.16
TRAV41A0A0B4J266 GOLGA4-212ENST00000617480 1545 ntTSL 5 BASIC16.05■□□□□ 0.16
TRAV41A0A0B4J266 KCNA2-206ENST00000638477 1524 ntTSL 5 BASIC16.05■□□□□ 0.16
TRAV41A0A0B4J266 LEF1-203ENST00000438313 1488 ntAPPRIS ALT1 TSL 1 (best) BASIC16.05■□□□□ 0.16
TRAV41A0A0B4J266 SMTNL2-202ENST00000389313 2280 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
TRAV41A0A0B4J266 DNAAF3-201ENST00000391720 2169 ntAPPRIS P3 TSL 2 BASIC16.05■□□□□ 0.16
TRAV41A0A0B4J266 FAM207A-202ENST00000397826 880 ntAPPRIS ALT1 TSL 1 (best) BASIC16.05■□□□□ 0.16
TRAV41A0A0B4J266 LSM12P1-201ENST00000411836 588 ntBASIC16.05■□□□□ 0.16
TRAV41A0A0B4J266 BX276092.2-201ENST00000417668 665 ntBASIC16.05■□□□□ 0.16
TRAV41A0A0B4J266 HLA-L-209ENST00000420110 1011 ntBASIC16.05■□□□□ 0.16
TRAV41A0A0B4J266 ZNF263-205ENST00000574253 1139 ntTSL 2 BASIC16.05■□□□□ 0.16
TRAV41A0A0B4J266 AC007993.2-201ENST00000592842 521 ntTSL 4 BASIC16.05■□□□□ 0.16
TRAV41A0A0B4J266 AL356652.1-201ENST00000615962 565 ntBASIC16.05■□□□□ 0.16
TRAV41A0A0B4J266 AL589743.5-201ENST00000616611 1050 ntBASIC16.05■□□□□ 0.16
TRAV41A0A0B4J266 AL772284.2-201ENST00000620151 1147 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
TRAV41A0A0B4J266 TXNRD3-204ENST00000640433 1932 ntAPPRIS P4 TSL 1 (best) BASIC16.05■□□□□ 0.16
TRAV41A0A0B4J266 FP700111.2-201ENST00000619190 1892 ntBASIC16.05■□□□□ 0.16
TRAV41A0A0B4J266 HCK-203ENST00000375862 1806 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
TRAV41A0A0B4J266 EGFL7-201ENST00000308874 1747 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
TRAV41A0A0B4J266 ATP6V0A2-201ENST00000330342 6542 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
TRAV41A0A0B4J266 OBSL1-204ENST00000404537 5841 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
TRAV41A0A0B4J266 ADAMTS2-202ENST00000274609 2044 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
TRAV41A0A0B4J266 ZNF821-202ENST00000425432 2000 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
TRAV41A0A0B4J266 PAQR6-213ENST00000612424 2037 ntTSL 2 BASIC16.04■□□□□ 0.16
TRAV41A0A0B4J266 RNASET2-203ENST00000366855 1417 ntTSL 5 BASIC16.04■□□□□ 0.16
TRAV41A0A0B4J266 OAF-201ENST00000328965 2525 ntAPPRIS P2 TSL 1 (best) BASIC16.04■□□□□ 0.16
TRAV41A0A0B4J266 RMND5A-201ENST00000283632 6301 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
TRAV41A0A0B4J266 SPHK2-213ENST00000601712 1394 ntAPPRIS ALT2 TSL 5 BASIC16.04■□□□□ 0.16
TRAV41A0A0B4J266 TCF7L1-201ENST00000282111 2968 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
TRAV41A0A0B4J266 CRB2-202ENST00000373631 5550 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
TRAV41A0A0B4J266 KDM2A-202ENST00000398645 6511 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
TRAV41A0A0B4J266 RFT1-202ENST00000394738 1800 ntTSL 5 BASIC16.04■□□□□ 0.16
TRAV41A0A0B4J266 RPLP0-201ENST00000228306 1257 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
TRAV41A0A0B4J266 UNC50-201ENST00000357765 1143 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
TRAV41A0A0B4J266 RBP4-201ENST00000371464 1068 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
TRAV41A0A0B4J266 AP000785.1-201ENST00000527314 613 ntTSL 4 BASIC16.04■□□□□ 0.16
TRAV41A0A0B4J266 AC104771.1-201ENST00000603335 964 ntBASIC16.04■□□□□ 0.16
TRAV41A0A0B4J266 ACYP2-207ENST00000606082 713 ntTSL 5 BASIC16.04■□□□□ 0.16
TRAV41A0A0B4J266 DLGAP4-204ENST00000373913 5056 ntAPPRIS P4 TSL 1 (best) BASIC16.04■□□□□ 0.16
TRAV41A0A0B4J266 SACM1L-202ENST00000418611 2164 ntTSL 2 BASIC16.04■□□□□ 0.16
TRAV41A0A0B4J266 CPNE2-201ENST00000290776 2645 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 40.9 ms