Protein–RNA interactions for Protein: Q9Y5G7

PCDHGA6, Protocadherin gamma-A6, humanhuman

Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA6Q9Y5G7 FAM78B-202ENST00000354422 1475 ntAPPRIS P1 TSL 2 BASIC25.26■■□□□ 1.63
PCDHGA6Q9Y5G7 PANK2-207ENST00000610179 1807 ntAPPRIS ALT2 TSL 1 (best) BASIC25.26■■□□□ 1.63
PCDHGA6Q9Y5G7 HOXB3-207ENST00000472863 1909 ntTSL 2 BASIC25.25■■□□□ 1.63
PCDHGA6Q9Y5G7 ABHD17A-201ENST00000250974 1630 ntTSL 1 (best) BASIC25.25■■□□□ 1.63
PCDHGA6Q9Y5G7 PQLC1-202ENST00000357575 2475 ntAPPRIS ALT1 TSL 5 BASIC25.24■■□□□ 1.63
PCDHGA6Q9Y5G7 SLC2A4RG-201ENST00000266077 1731 ntAPPRIS P1 TSL 1 (best) BASIC25.24■■□□□ 1.63
PCDHGA6Q9Y5G7 SSBP4-202ENST00000348495 1721 ntAPPRIS ALT1 TSL 2 BASIC25.23■■□□□ 1.63
PCDHGA6Q9Y5G7 CCZ1B-215ENST00000626257 2211 ntTSL 2 BASIC25.23■■□□□ 1.63
PCDHGA6Q9Y5G7 GSC-201ENST00000238558 1264 ntAPPRIS P1 TSL 1 (best) BASIC25.23■■□□□ 1.63
PCDHGA6Q9Y5G7 WNT5A-AS1-201ENST00000469484 500 ntTSL 3 BASIC25.23■■□□□ 1.63
PCDHGA6Q9Y5G7 AC120057.4-201ENST00000624722 1615 ntBASIC25.23■■□□□ 1.63
PCDHGA6Q9Y5G7 CUEDC1-201ENST00000360238 2193 ntAPPRIS P1 TSL 2 BASIC25.22■■□□□ 1.63
PCDHGA6Q9Y5G7 ABCB10P3-201ENST00000561950 2166 ntBASIC25.22■■□□□ 1.63
PCDHGA6Q9Y5G7 AC105285.1-201ENST00000500914 2036 ntTSL 1 (best) BASIC25.22■■□□□ 1.63
PCDHGA6Q9Y5G7 AC108673.1-201ENST00000510422 1159 ntBASIC25.22■■□□□ 1.63
PCDHGA6Q9Y5G7 AC013394.1-201ENST00000629685 808 ntAPPRIS P1 TSL 5 BASIC25.22■■□□□ 1.63
PCDHGA6Q9Y5G7 UBE2L6-201ENST00000287156 1354 ntAPPRIS P1 TSL 1 (best) BASIC25.21■■□□□ 1.63
PCDHGA6Q9Y5G7 RP9P-201ENST00000381639 1303 ntTSL 1 (best) BASIC25.21■■□□□ 1.63
PCDHGA6Q9Y5G7 LAPTM4B-203ENST00000521545 915 ntAPPRIS P1 TSL 1 (best) BASIC25.21■■□□□ 1.63
PCDHGA6Q9Y5G7 TPM2-203ENST00000378292 2147 ntAPPRIS ALT1 TSL 1 (best) BASIC25.21■■□□□ 1.63
PCDHGA6Q9Y5G7 AL139393.1-201ENST00000417479 573 ntTSL 5 BASIC25.2■■□□□ 1.62
PCDHGA6Q9Y5G7 CIB2-204ENST00000557846 934 ntTSL 3 BASIC25.2■■□□□ 1.62
PCDHGA6Q9Y5G7 AC021231.2-201ENST00000594613 730 ntBASIC25.2■■□□□ 1.62
PCDHGA6Q9Y5G7 TPI1-201ENST00000229270 1763 ntTSL 1 (best) BASIC25.2■■□□□ 1.62
PCDHGA6Q9Y5G7 AC187653.1-201ENST00000506382 702 ntAPPRIS P1 TSL 5 BASIC25.19■■□□□ 1.62
PCDHGA6Q9Y5G7 CAPNS1-211ENST00000590874 926 ntTSL 5 BASIC25.19■■□□□ 1.62
PCDHGA6Q9Y5G7 AP000547.3-202ENST00000592107 1019 ntTSL 1 (best) BASIC25.19■■□□□ 1.62
PCDHGA6Q9Y5G7 MAPK12-201ENST00000215659 1918 ntAPPRIS P1 TSL 1 (best) BASIC25.18■■□□□ 1.62
PCDHGA6Q9Y5G7 RTN2-201ENST00000245923 2293 ntTSL 1 (best) BASIC25.18■■□□□ 1.62
PCDHGA6Q9Y5G7 CCDC149-203ENST00000502801 1079 ntTSL 1 (best) BASIC25.18■■□□□ 1.62
PCDHGA6Q9Y5G7 FADS3-201ENST00000278829 1779 ntAPPRIS P1 TSL 1 (best) BASIC25.18■■□□□ 1.62
PCDHGA6Q9Y5G7 SLC9A3R2-202ENST00000432365 1564 ntTSL 1 (best) BASIC25.18■■□□□ 1.62
PCDHGA6Q9Y5G7 RNF130-205ENST00000521389 2263 ntAPPRIS P1 TSL 1 (best) BASIC25.17■■□□□ 1.62
PCDHGA6Q9Y5G7 SCX-201ENST00000567180 999 ntAPPRIS P1 TSL 1 (best) BASIC25.17■■□□□ 1.62
PCDHGA6Q9Y5G7 UBE2S-203ENST00000589978 496 ntTSL 5 BASIC25.17■■□□□ 1.62
PCDHGA6Q9Y5G7 AL451007.3-201ENST00000640271 588 ntAPPRIS P1 BASIC25.17■■□□□ 1.62
PCDHGA6Q9Y5G7 NGB-201ENST00000298352 1884 ntAPPRIS P1 TSL 1 (best) BASIC25.17■■□□□ 1.62
PCDHGA6Q9Y5G7 HINT2-201ENST00000259667 628 ntAPPRIS P1 TSL 1 (best) BASIC25.16■■□□□ 1.62
PCDHGA6Q9Y5G7 UBE2A-207ENST00000628549 934 ntTSL 2 BASIC25.15■■□□□ 1.62
PCDHGA6Q9Y5G7 FGFRL1-205ENST00000510644 2304 ntAPPRIS P1 TSL 1 (best) BASIC25.15■■□□□ 1.62
PCDHGA6Q9Y5G7 TESK1-206ENST00000620767 2438 ntAPPRIS P1 TSL 5 BASIC25.14■■□□□ 1.62
PCDHGA6Q9Y5G7 ECI1-207ENST00000570258 1512 ntAPPRIS ALT2 TSL 5 BASIC25.14■■□□□ 1.62
PCDHGA6Q9Y5G7 MIR6090-201ENST00000622481 60 ntBASIC25.14■■□□□ 1.62
PCDHGA6Q9Y5G7 BIN1-204ENST00000348750 2074 ntTSL 1 (best) BASIC25.14■■□□□ 1.61
PCDHGA6Q9Y5G7 STUB1-201ENST00000219548 1472 ntAPPRIS P1 TSL 1 (best) BASIC25.14■■□□□ 1.61
PCDHGA6Q9Y5G7 COL13A1-212ENST00000520133 1833 ntTSL 5 BASIC25.14■■□□□ 1.61
PCDHGA6Q9Y5G7 AC116407.1-201ENST00000398832 1599 ntTSL 2 BASIC25.14■■□□□ 1.61
PCDHGA6Q9Y5G7 ACOT12-204ENST00000513751 612 ntTSL 1 (best) BASIC25.13■■□□□ 1.61
PCDHGA6Q9Y5G7 RCE1-201ENST00000309657 1485 ntAPPRIS P1 TSL 1 (best) BASIC25.13■■□□□ 1.61
PCDHGA6Q9Y5G7 KCNQ5-204ENST00000370392 1469 ntTSL 1 (best) BASIC25.13■■□□□ 1.61
PCDHGA6Q9Y5G7 MACF1-219ENST00000484793 834 ntTSL 2 BASIC25.12■■□□□ 1.61
PCDHGA6Q9Y5G7 UCK1-201ENST00000372208 2063 ntTSL 1 (best) BASIC25.12■■□□□ 1.61
PCDHGA6Q9Y5G7 EXOC3L4-201ENST00000380069 2293 ntAPPRIS P1 TSL 1 (best) BASIC25.12■■□□□ 1.61
PCDHGA6Q9Y5G7 ATRNL1-207ENST00000527407 1583 ntTSL 5 BASIC25.11■■□□□ 1.61
PCDHGA6Q9Y5G7 DNLZ-201ENST00000371738 724 ntAPPRIS P1 TSL 1 (best) BASIC25.11■■□□□ 1.61
PCDHGA6Q9Y5G7 DDN-AS1-203ENST00000552284 934 ntTSL 3 BASIC25.11■■□□□ 1.61
PCDHGA6Q9Y5G7 RCC1L-201ENST00000610322 2300 ntAPPRIS P1 TSL 1 (best) BASIC25.11■■□□□ 1.61
PCDHGA6Q9Y5G7 DOCK5-202ENST00000410074 786 ntTSL 2 BASIC25.1■■□□□ 1.61
PCDHGA6Q9Y5G7 MISP3-202ENST00000587086 1535 ntAPPRIS P2 TSL 1 (best) BASIC25.1■■□□□ 1.61
PCDHGA6Q9Y5G7 RCC1L-202ENST00000614461 2419 ntTSL 1 (best) BASIC25.1■■□□□ 1.61
PCDHGA6Q9Y5G7 MXD3-203ENST00000439742 1483 ntAPPRIS P1 TSL 1 (best) BASIC25.09■■□□□ 1.61
PCDHGA6Q9Y5G7 CIB1-201ENST00000328649 1247 ntAPPRIS P1 TSL 1 (best) BASIC25.09■■□□□ 1.61
PCDHGA6Q9Y5G7 CIB1-202ENST00000612800 1096 ntTSL 1 (best) BASIC25.09■■□□□ 1.61
PCDHGA6Q9Y5G7 SHF-206ENST00000560471 2499 ntTSL 5 BASIC25.09■■□□□ 1.61
PCDHGA6Q9Y5G7 AGPAT2-202ENST00000371696 1512 ntAPPRIS P1 TSL 1 (best) BASIC25.08■■□□□ 1.61
PCDHGA6Q9Y5G7 HOXD8-201ENST00000313173 1917 ntAPPRIS P3 TSL 2 BASIC25.05■■□□□ 1.6
PCDHGA6Q9Y5G7 TPRA1-202ENST00000355552 1933 ntAPPRIS P1 TSL 1 (best) BASIC25.05■■□□□ 1.6
PCDHGA6Q9Y5G7 POLR1D-201ENST00000302979 1166 ntAPPRIS P2 TSL 1 (best) BASIC25.04■■□□□ 1.6
PCDHGA6Q9Y5G7 EXOC3-209ENST00000512944 2825 ntAPPRIS P1 TSL 1 (best) BASIC25.04■■□□□ 1.6
PCDHGA6Q9Y5G7 MIR639-201ENST00000384974 98 ntBASIC25.03■■□□□ 1.6
PCDHGA6Q9Y5G7 RPS2-202ENST00000526522 924 ntTSL 2 BASIC25.03■■□□□ 1.6
PCDHGA6Q9Y5G7 DCBLD1-201ENST00000296955 1979 ntAPPRIS P2 TSL 1 (best) BASIC25.02■■□□□ 1.6
PCDHGA6Q9Y5G7 MIR4449-201ENST00000578365 66 ntBASIC25.02■■□□□ 1.6
PCDHGA6Q9Y5G7 CGREF1-203ENST00000402394 1906 ntAPPRIS P2 TSL 2 BASIC25.02■■□□□ 1.6
PCDHGA6Q9Y5G7 TRNP1-201ENST00000522111 1958 ntAPPRIS P2 TSL 1 (best) BASIC25.01■■□□□ 1.59
PCDHGA6Q9Y5G7 GALK1-205ENST00000588479 1866 ntAPPRIS P1 TSL 1 (best) BASIC25■■□□□ 1.59
PCDHGA6Q9Y5G7 LINC01971-201ENST00000617888 1048 ntBASIC25■■□□□ 1.59
PCDHGA6Q9Y5G7 BTBD19-203ENST00000450269 1572 ntAPPRIS P1 TSL 5 BASIC25■■□□□ 1.59
PCDHGA6Q9Y5G7 MRPL9-201ENST00000368829 882 ntAPPRIS ALT2 TSL 2 BASIC24.99■■□□□ 1.59
PCDHGA6Q9Y5G7 AL589765.4-201ENST00000512280 382 ntTSL 3 BASIC24.99■■□□□ 1.59
PCDHGA6Q9Y5G7 RNF166-209ENST00000567844 633 ntTSL 5 BASIC24.99■■□□□ 1.59
PCDHGA6Q9Y5G7 PLEKHJ1-201ENST00000326631 1206 ntAPPRIS P1 TSL 1 (best) BASIC24.98■■□□□ 1.59
PCDHGA6Q9Y5G7 RPS2-201ENST00000343262 985 ntAPPRIS P1 TSL 1 (best) BASIC24.98■■□□□ 1.59
PCDHGA6Q9Y5G7 HNRNPAB-206ENST00000506339 1747 ntAPPRIS ALT2 TSL 5 BASIC24.98■■□□□ 1.59
PCDHGA6Q9Y5G7 MIR3648-2-201ENST00000581792 180 ntBASIC24.97■■□□□ 1.59
PCDHGA6Q9Y5G7 MIR3648-1-201ENST00000615959 180 ntBASIC24.97■■□□□ 1.59
PCDHGA6Q9Y5G7 ABHD12-201ENST00000339157 2117 ntAPPRIS P1 TSL 2 BASIC24.97■■□□□ 1.59
PCDHGA6Q9Y5G7 AC139426.1-201ENST00000568218 2529 ntBASIC24.96■■□□□ 1.59
PCDHGA6Q9Y5G7 GIPC1-203ENST00000393033 1926 ntAPPRIS P1 TSL 1 (best) BASIC24.96■■□□□ 1.59
PCDHGA6Q9Y5G7 AGPS-202ENST00000409888 815 ntTSL 4 BASIC24.96■■□□□ 1.59
PCDHGA6Q9Y5G7 TSPAN11-203ENST00000545802 1649 ntTSL 1 (best) BASIC24.96■■□□□ 1.59
PCDHGA6Q9Y5G7 AC004837.3-201ENST00000420748 565 ntTSL 4 BASIC24.95■■□□□ 1.58
PCDHGA6Q9Y5G7 CLEC3B-202ENST00000428034 752 ntTSL 2 BASIC24.95■■□□□ 1.58
PCDHGA6Q9Y5G7 DTNBP1-202ENST00000344537 1403 ntAPPRIS P1 TSL 1 (best) BASIC24.95■■□□□ 1.58
PCDHGA6Q9Y5G7 FZD2-201ENST00000315323 2112 ntAPPRIS P1 BASIC24.94■■□□□ 1.58
PCDHGA6Q9Y5G7 KLC2-205ENST00000394078 1557 ntTSL 5 BASIC24.94■■□□□ 1.58
PCDHGA6Q9Y5G7 PRSS41-201ENST00000399677 1127 ntAPPRIS P1 TSL 5 BASIC24.94■■□□□ 1.58
PCDHGA6Q9Y5G7 AL118558.1-203ENST00000553701 447 ntTSL 3 BASIC24.94■■□□□ 1.58
PCDHGA6Q9Y5G7 DUX4L11-201ENST00000611504 1267 ntBASIC24.94■■□□□ 1.58
PCDHGA6Q9Y5G7 DUX4L12-201ENST00000614593 1267 ntBASIC24.94■■□□□ 1.58
Retrieved 100 of 98,524 protein–RNA pairs in 16.8 ms