Protein–RNA interactions for Protein: Q9UPN6

SCAF8, Protein SCAF8, humanhuman

Known RBP Predictions only

Length 1,271 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF8Q9UPN6 SNTG2-201ENST00000308624 1888 ntAPPRIS P1 TSL 1 (best) BASIC31.79■■■□□ 2.68
SCAF8Q9UPN6 DUX4L13-201ENST00000554103 1267 ntBASIC31.78■■■□□ 2.68
SCAF8Q9UPN6 DUX4L15-201ENST00000611059 1267 ntBASIC31.78■■■□□ 2.68
SCAF8Q9UPN6 DUX4L23-201ENST00000615195 1269 ntBASIC31.78■■■□□ 2.68
SCAF8Q9UPN6 DUX4L24-201ENST00000617576 1269 ntBASIC31.78■■■□□ 2.68
SCAF8Q9UPN6 DUX4L22-201ENST00000618238 1269 ntBASIC31.78■■■□□ 2.68
SCAF8Q9UPN6 DUX4L20-201ENST00000619712 1269 ntBASIC31.78■■■□□ 2.68
SCAF8Q9UPN6 DUX4L21-201ENST00000622058 1269 ntBASIC31.78■■■□□ 2.68
SCAF8Q9UPN6 DUX4L10-201ENST00000622460 1267 ntBASIC31.78■■■□□ 2.68
SCAF8Q9UPN6 DUX4L25-201ENST00000624915 1269 ntBASIC31.78■■■□□ 2.68
SCAF8Q9UPN6 AURKAIP1-203ENST00000338370 1072 ntAPPRIS P1 TSL 1 (best) BASIC31.77■■■□□ 2.68
SCAF8Q9UPN6 FKBP1A-210ENST00000614856 562 ntTSL 2 BASIC31.76■■■□□ 2.67
SCAF8Q9UPN6 HES6-205ENST00000409356 528 ntTSL 2 BASIC31.75■■■□□ 2.67
SCAF8Q9UPN6 CHST12-204ENST00000618655 2131 ntAPPRIS P1 TSL 1 (best) BASIC31.75■■■□□ 2.67
SCAF8Q9UPN6 STARD10-220ENST00000545082 1085 ntTSL 3 BASIC31.74■■■□□ 2.67
SCAF8Q9UPN6 AC009041.3-201ENST00000564390 879 ntTSL 5 BASIC31.74■■■□□ 2.67
SCAF8Q9UPN6 TRNP1-201ENST00000522111 1958 ntAPPRIS P2 TSL 1 (best) BASIC31.74■■■□□ 2.67
SCAF8Q9UPN6 AC105285.1-201ENST00000500914 2036 ntTSL 1 (best) BASIC31.73■■■□□ 2.67
SCAF8Q9UPN6 ADRA2C-202ENST00000509482 1600 ntTSL 3 BASIC31.71■■■□□ 2.67
SCAF8Q9UPN6 ANGPTL6-204ENST00000592641 1781 ntAPPRIS P1 TSL 1 (best) BASIC31.71■■■□□ 2.67
SCAF8Q9UPN6 NME2-205ENST00000512737 826 ntAPPRIS P1 TSL 1 (best) BASIC31.71■■■□□ 2.67
SCAF8Q9UPN6 RUNX2-203ENST00000371436 1588 ntAPPRIS ALT2 TSL 5 BASIC31.69■■■□□ 2.66
SCAF8Q9UPN6 SH3GLB2-201ENST00000372554 1985 ntTSL 1 (best) BASIC31.69■■■□□ 2.66
SCAF8Q9UPN6 C11orf95-204ENST00000546282 390 ntTSL 3 BASIC31.69■■■□□ 2.66
SCAF8Q9UPN6 NOG-201ENST00000332822 1892 ntAPPRIS P1 BASIC31.68■■■□□ 2.66
SCAF8Q9UPN6 AC007383.2-202ENST00000435627 482 ntTSL 2 BASIC31.68■■■□□ 2.66
SCAF8Q9UPN6 CHML-204ENST00000638121 920 ntTSL 2 BASIC31.68■■■□□ 2.66
SCAF8Q9UPN6 H2AFV-204ENST00000350771 687 ntTSL 2 BASIC31.67■■■□□ 2.66
SCAF8Q9UPN6 BTBD19-203ENST00000450269 1572 ntAPPRIS P1 TSL 5 BASIC31.67■■■□□ 2.66
SCAF8Q9UPN6 C7orf50-202ENST00000397098 2131 ntAPPRIS P2 TSL 1 (best) BASIC31.67■■■□□ 2.66
SCAF8Q9UPN6 RPS20-211ENST00000524349 752 ntTSL 1 (best) BASIC31.66■■■□□ 2.66
SCAF8Q9UPN6 PIK3R2-208ENST00000617642 1446 ntTSL 5 BASIC31.66■■■□□ 2.66
SCAF8Q9UPN6 CCM2-201ENST00000258781 1894 ntAPPRIS P3 TSL 1 (best) BASIC31.65■■■□□ 2.66
SCAF8Q9UPN6 AP002884.3-203ENST00000419895 1711 ntTSL 2 BASIC31.65■■■□□ 2.66
SCAF8Q9UPN6 AP000251.1-201ENST00000433071 822 ntTSL 1 (best) BASIC31.64■■■□□ 2.66
SCAF8Q9UPN6 AP000911.3-201ENST00000526377 1130 ntTSL 3 BASIC31.64■■■□□ 2.66
SCAF8Q9UPN6 AC018755.3-201ENST00000598755 664 ntTSL 2 BASIC31.64■■■□□ 2.66
SCAF8Q9UPN6 MYLIP-202ENST00000356840 1666 ntAPPRIS P1 TSL 1 (best) BASIC31.64■■■□□ 2.65
SCAF8Q9UPN6 WHRN-203ENST00000374057 1718 ntTSL 2 BASIC31.63■■■□□ 2.65
SCAF8Q9UPN6 UBALD1-203ENST00000587649 707 ntTSL 3 BASIC31.62■■■□□ 2.65
SCAF8Q9UPN6 ABHD12-201ENST00000339157 2117 ntAPPRIS P1 TSL 2 BASIC31.61■■■□□ 2.65
SCAF8Q9UPN6 AC004837.3-201ENST00000420748 565 ntTSL 4 BASIC31.61■■■□□ 2.65
SCAF8Q9UPN6 SSBP3-204ENST00000371320 2077 ntAPPRIS P3 TSL 1 (best) BASIC31.61■■■□□ 2.65
SCAF8Q9UPN6 PTPMT1-203ENST00000426530 1014 ntTSL 1 (best) BASIC31.6■■■□□ 2.65
SCAF8Q9UPN6 CRNDE-206ENST00000559432 587 ntTSL 3 BASIC31.6■■■□□ 2.65
SCAF8Q9UPN6 ZBTB12-201ENST00000375527 1875 ntAPPRIS P1 TSL 1 (best) BASIC31.6■■■□□ 2.65
SCAF8Q9UPN6 MTCP1-202ENST00000369476 2274 ntAPPRIS P1 TSL 3 BASIC31.6■■■□□ 2.65
SCAF8Q9UPN6 PIGX-201ENST00000296333 953 ntAPPRIS ALT2 TSL 2 BASIC31.59■■■□□ 2.65
SCAF8Q9UPN6 PKIG-207ENST00000372894 1191 ntAPPRIS P1 TSL 1 (best) BASIC31.59■■■□□ 2.65
SCAF8Q9UPN6 EI24-212ENST00000615917 1407 ntTSL 2 BASIC31.58■■■□□ 2.65
SCAF8Q9UPN6 PLEKHG6-206ENST00000536531 1683 ntTSL 1 (best) BASIC31.58■■■□□ 2.65
SCAF8Q9UPN6 POLR3H-201ENST00000337566 1330 ntTSL 1 (best) BASIC31.58■■■□□ 2.65
SCAF8Q9UPN6 ARL6IP4-211ENST00000454885 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC31.58■■■□□ 2.65
SCAF8Q9UPN6 TSPAN11-203ENST00000545802 1649 ntTSL 1 (best) BASIC31.58■■■□□ 2.65
SCAF8Q9UPN6 AC120057.4-201ENST00000624722 1615 ntBASIC31.58■■■□□ 2.65
SCAF8Q9UPN6 ELOC-207ENST00000522337 816 ntAPPRIS P1 TSL 2 BASIC31.58■■■□□ 2.65
SCAF8Q9UPN6 SRP68-213ENST00000629930 165 ntTSL 5 BASIC31.58■■■□□ 2.65
SCAF8Q9UPN6 CTXN1-201ENST00000318978 1274 ntAPPRIS P1 TSL 1 (best) BASIC31.57■■■□□ 2.64
SCAF8Q9UPN6 FMR1-219ENST00000621453 1864 ntTSL 1 (best) BASIC31.57■■■□□ 2.64
SCAF8Q9UPN6 U2AF1-203ENST00000398137 1019 ntTSL 1 (best) BASIC31.56■■■□□ 2.64
SCAF8Q9UPN6 U2AF1L5-212ENST00000639996 1019 ntTSL 1 (best) BASIC31.56■■■□□ 2.64
SCAF8Q9UPN6 HNRNPAB-206ENST00000506339 1747 ntAPPRIS ALT2 TSL 5 BASIC31.55■■■□□ 2.64
SCAF8Q9UPN6 RDX-206ENST00000528900 1814 ntTSL 1 (best) BASIC31.55■■■□□ 2.64
SCAF8Q9UPN6 BATF3-201ENST00000243440 980 ntAPPRIS P1 TSL 1 (best) BASIC31.55■■■□□ 2.64
SCAF8Q9UPN6 RARRES2P2-201ENST00000394842 485 ntBASIC31.55■■■□□ 2.64
SCAF8Q9UPN6 C16orf95-206ENST00000618367 974 ntAPPRIS ALT2 TSL 2 BASIC31.55■■■□□ 2.64
SCAF8Q9UPN6 ZBTB25-202ENST00000555220 1440 ntTSL 1 (best) BASIC31.54■■■□□ 2.64
SCAF8Q9UPN6 VEGFA-202ENST00000324450 954 ntTSL 1 (best) BASIC31.53■■■□□ 2.64
SCAF8Q9UPN6 VEGFA-203ENST00000372055 1286 ntTSL 1 (best) BASIC31.53■■■□□ 2.64
SCAF8Q9UPN6 VEGFA-213ENST00000482630 1146 ntTSL 1 (best) BASIC31.53■■■□□ 2.64
SCAF8Q9UPN6 VEGFA-227ENST00000615393 984 ntTSL 1 (best) BASIC31.53■■■□□ 2.64
SCAF8Q9UPN6 VEGFA-228ENST00000617771 1116 ntTSL 1 (best) BASIC31.53■■■□□ 2.64
SCAF8Q9UPN6 VEGFA-229ENST00000621747 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC31.53■■■□□ 2.64
SCAF8Q9UPN6 VEGFA-230ENST00000640482 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC31.53■■■□□ 2.64
SCAF8Q9UPN6 VEGFA-232ENST00000640653 1170 ntAPPRIS ALT2 TSL 1 (best) BASIC31.53■■■□□ 2.64
SCAF8Q9UPN6 CHST11-202ENST00000546689 756 ntTSL 2 BASIC31.52■■■□□ 2.64
SCAF8Q9UPN6 RUNX2-211ENST00000625924 1458 ntAPPRIS ALT2 TSL 1 (best) BASIC31.52■■■□□ 2.64
SCAF8Q9UPN6 GADD45A-205ENST00000617962 1142 ntTSL 1 (best) BASIC31.51■■■□□ 2.63
SCAF8Q9UPN6 AC016595.1-201ENST00000559410 383 ntTSL 3 BASIC31.5■■■□□ 2.63
SCAF8Q9UPN6 CBWD5-202ENST00000377384 1347 ntTSL 1 (best) BASIC31.49■■■□□ 2.63
SCAF8Q9UPN6 UBA52-204ENST00000595158 743 ntAPPRIS P1 TSL 3 BASIC31.48■■■□□ 2.63
SCAF8Q9UPN6 IGFBP2-201ENST00000233809 1439 ntAPPRIS P1 TSL 1 (best) BASIC31.48■■■□□ 2.63
SCAF8Q9UPN6 SIAH1-203ENST00000394725 2147 ntAPPRIS P3 TSL 1 (best) BASIC31.48■■■□□ 2.63
SCAF8Q9UPN6 SMDT1-201ENST00000331479 1567 ntAPPRIS P1 TSL 1 (best) BASIC31.47■■■□□ 2.63
SCAF8Q9UPN6 ARL8A-204ENST00000614750 1727 ntTSL 3 BASIC31.47■■■□□ 2.63
SCAF8Q9UPN6 GPX1-201ENST00000419349 1106 ntBASIC31.47■■■□□ 2.63
SCAF8Q9UPN6 ATP8B2-201ENST00000368487 1523 ntTSL 1 (best) BASIC31.47■■■□□ 2.63
SCAF8Q9UPN6 RASSF7-202ENST00000397583 1928 ntAPPRIS P3 TSL 1 (best) BASIC31.46■■■□□ 2.63
SCAF8Q9UPN6 FTCD-202ENST00000397743 1834 ntTSL 1 (best) BASIC31.46■■■□□ 2.63
SCAF8Q9UPN6 FBRSL1-201ENST00000434748 5568 ntAPPRIS P2 TSL 1 (best) BASIC31.45■■■□□ 2.63
SCAF8Q9UPN6 AC068134.2-201ENST00000437095 576 ntTSL 3 BASIC31.44■■■□□ 2.62
SCAF8Q9UPN6 AC231981.1-201ENST00000450917 974 ntTSL 3 BASIC31.44■■■□□ 2.62
SCAF8Q9UPN6 AC092902.2-221ENST00000628476 965 ntTSL 5 BASIC31.44■■■□□ 2.62
SCAF8Q9UPN6 C11orf63-202ENST00000307257 1964 ntTSL 2 BASIC31.43■■■□□ 2.62
SCAF8Q9UPN6 TMEM251-202ENST00000415050 1303 ntTSL 2 BASIC31.43■■■□□ 2.62
SCAF8Q9UPN6 TCEA2-204ENST00000395053 1733 ntTSL 1 (best) BASIC31.42■■■□□ 2.62
SCAF8Q9UPN6 XKR6-201ENST00000297303 1550 ntTSL 1 (best) BASIC31.42■■■□□ 2.62
SCAF8Q9UPN6 CLTA-207ENST00000470744 1102 ntTSL 2 BASIC31.41■■■□□ 2.62
SCAF8Q9UPN6 BANF1-208ENST00000533166 1135 ntAPPRIS P1 TSL 2 BASIC31.41■■■□□ 2.62
SCAF8Q9UPN6 ABHD17AP5-201ENST00000580133 923 ntBASIC31.41■■■□□ 2.62
Retrieved 100 of 98,524 protein–RNA pairs in 14.2 ms