Protein–RNA interactions for Protein: Q9UM47

NOTCH3, Neurogenic locus notch homolog protein 3, humanhuman

Predictions only

Length 2,321 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NOTCH3Q9UM47 DUX4L15-201ENST00000611059 1267 ntBASIC20.23■□□□□ 0.83
NOTCH3Q9UM47 DUX4L23-201ENST00000615195 1269 ntBASIC20.23■□□□□ 0.83
NOTCH3Q9UM47 DUX4L24-201ENST00000617576 1269 ntBASIC20.23■□□□□ 0.83
NOTCH3Q9UM47 DUX4L22-201ENST00000618238 1269 ntBASIC20.23■□□□□ 0.83
NOTCH3Q9UM47 DUX4L20-201ENST00000619712 1269 ntBASIC20.23■□□□□ 0.83
NOTCH3Q9UM47 DUX4L21-201ENST00000622058 1269 ntBASIC20.23■□□□□ 0.83
NOTCH3Q9UM47 DUX4L10-201ENST00000622460 1267 ntBASIC20.23■□□□□ 0.83
NOTCH3Q9UM47 DUX4L25-201ENST00000624915 1269 ntBASIC20.23■□□□□ 0.83
NOTCH3Q9UM47 ARHGEF7-205ENST00000375739 5375 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
NOTCH3Q9UM47 TUBB6-201ENST00000317702 2064 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
NOTCH3Q9UM47 AC018755.3-201ENST00000598755 664 ntTSL 2 BASIC20.22■□□□□ 0.83
NOTCH3Q9UM47 FAAP20-202ENST00000378546 729 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
NOTCH3Q9UM47 RHOC-202ENST00000339083 1418 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
NOTCH3Q9UM47 FOXG1-201ENST00000313071 4890 ntAPPRIS P1 BASIC20.21■□□□□ 0.83
NOTCH3Q9UM47 AC012615.2-201ENST00000586259 447 ntTSL 4 BASIC20.21■□□□□ 0.83
NOTCH3Q9UM47 CACNA1H-201ENST00000348261 8208 ntAPPRIS P4 TSL 1 (best) BASIC20.21■□□□□ 0.83
NOTCH3Q9UM47 TRNP1-201ENST00000522111 1958 ntAPPRIS P2 TSL 1 (best) BASIC20.2■□□□□ 0.82
NOTCH3Q9UM47 VPS37D-201ENST00000324941 1624 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
NOTCH3Q9UM47 CCM2-201ENST00000258781 1894 ntAPPRIS P3 TSL 1 (best) BASIC20.2■□□□□ 0.82
NOTCH3Q9UM47 SH3GLB2-201ENST00000372554 1985 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
NOTCH3Q9UM47 MRPL51-201ENST00000229238 1234 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
NOTCH3Q9UM47 AC004837.3-201ENST00000420748 565 ntTSL 4 BASIC20.19■□□□□ 0.82
NOTCH3Q9UM47 DTNBP1-202ENST00000344537 1403 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
NOTCH3Q9UM47 CHST12-204ENST00000618655 2131 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
NOTCH3Q9UM47 POLR1D-201ENST00000302979 1166 ntAPPRIS P2 TSL 1 (best) BASIC20.19■□□□□ 0.82
NOTCH3Q9UM47 RBPMS-209ENST00000520161 842 ntTSL 2 BASIC20.19■□□□□ 0.82
NOTCH3Q9UM47 GADD45G-201ENST00000252506 1065 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
NOTCH3Q9UM47 PPP4R4-202ENST00000328839 876 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
NOTCH3Q9UM47 C5orf66-AS1-201ENST00000507035 843 ntTSL 2 BASIC20.17■□□□□ 0.82
NOTCH3Q9UM47 ABHD17AP3-201ENST00000503096 1137 ntBASIC20.16■□□□□ 0.82
NOTCH3Q9UM47 SRP68-213ENST00000629930 165 ntTSL 5 BASIC20.16■□□□□ 0.82
NOTCH3Q9UM47 SLC2A4RG-201ENST00000266077 1731 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
NOTCH3Q9UM47 EBPL-201ENST00000242827 914 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
NOTCH3Q9UM47 BRD4-212ENST00000630599 726 ntTSL 2 BASIC20.15■□□□□ 0.82
NOTCH3Q9UM47 GPI-201ENST00000356487 2210 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
NOTCH3Q9UM47 CHPT1-201ENST00000229266 1585 ntAPPRIS P2 TSL 1 (best) BASIC20.14■□□□□ 0.81
NOTCH3Q9UM47 UBALD1-203ENST00000587649 707 ntTSL 3 BASIC20.14■□□□□ 0.81
NOTCH3Q9UM47 PCYT2-206ENST00000571105 1628 ntTSL 5 BASIC20.13■□□□□ 0.81
NOTCH3Q9UM47 AP000911.3-201ENST00000526377 1130 ntTSL 3 BASIC20.13■□□□□ 0.81
NOTCH3Q9UM47 AGPAT2-202ENST00000371696 1512 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
NOTCH3Q9UM47 KCNQ5-204ENST00000370392 1469 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
NOTCH3Q9UM47 LZTS2-201ENST00000370220 5741 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
NOTCH3Q9UM47 MYLIP-202ENST00000356840 1666 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
NOTCH3Q9UM47 NOG-201ENST00000332822 1892 ntAPPRIS P1 BASIC20.12■□□□□ 0.81
NOTCH3Q9UM47 ZBTB25-202ENST00000555220 1440 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
NOTCH3Q9UM47 ABHD12-201ENST00000339157 2117 ntAPPRIS P1 TSL 2 BASIC20.11■□□□□ 0.81
NOTCH3Q9UM47 CISD3-204ENST00000613478 2074 ntAPPRIS P1 TSL 2 BASIC20.11■□□□□ 0.81
NOTCH3Q9UM47 NME2-205ENST00000512737 826 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
NOTCH3Q9UM47 AC016595.1-201ENST00000559410 383 ntTSL 3 BASIC20.11■□□□□ 0.81
NOTCH3Q9UM47 ATP6V1E2-204ENST00000522587 1559 ntAPPRIS P1 TSL 3 BASIC20.11■□□□□ 0.81
NOTCH3Q9UM47 ARHGEF7-206ENST00000375741 5525 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
NOTCH3Q9UM47 ELOC-207ENST00000522337 816 ntAPPRIS P1 TSL 2 BASIC20.1■□□□□ 0.81
NOTCH3Q9UM47 RARRES2P2-201ENST00000394842 485 ntBASIC20.09■□□□□ 0.81
NOTCH3Q9UM47 ADRA2C-202ENST00000509482 1600 ntTSL 3 BASIC20.09■□□□□ 0.81
NOTCH3Q9UM47 METRNL-202ENST00000570778 967 ntTSL 5 BASIC20.09■□□□□ 0.81
NOTCH3Q9UM47 ANGPTL6-204ENST00000592641 1781 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
NOTCH3Q9UM47 UCK1-201ENST00000372208 2063 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
NOTCH3Q9UM47 POLR3H-201ENST00000337566 1330 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
NOTCH3Q9UM47 TMEM251-202ENST00000415050 1303 ntTSL 2 BASIC20.07■□□□□ 0.8
NOTCH3Q9UM47 OSBP-201ENST00000263847 5083 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
NOTCH3Q9UM47 AP002884.3-203ENST00000419895 1711 ntTSL 2 BASIC20.07■□□□□ 0.8
NOTCH3Q9UM47 FMR1-219ENST00000621453 1864 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
NOTCH3Q9UM47 PIGX-201ENST00000296333 953 ntAPPRIS ALT2 TSL 2 BASIC20.07■□□□□ 0.8
NOTCH3Q9UM47 KCTD5-202ENST00000564195 774 ntTSL 5 BASIC20.07■□□□□ 0.8
NOTCH3Q9UM47 SNTG2-201ENST00000308624 1888 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
NOTCH3Q9UM47 RANBP1-202ENST00000402752 1132 ntAPPRIS ALT1 TSL 1 (best) BASIC20.05■□□□□ 0.8
NOTCH3Q9UM47 DPY19L1-209ENST00000638088 5075 ntAPPRIS ALT2 TSL 5 BASIC20.05■□□□□ 0.8
NOTCH3Q9UM47 WHRN-203ENST00000374057 1718 ntTSL 2 BASIC20.05■□□□□ 0.8
NOTCH3Q9UM47 OLFM2-201ENST00000264833 2019 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
NOTCH3Q9UM47 RDX-206ENST00000528900 1814 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
NOTCH3Q9UM47 RUNX2-211ENST00000625924 1458 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
NOTCH3Q9UM47 TSPAN11-203ENST00000545802 1649 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
NOTCH3Q9UM47 AC068134.2-201ENST00000437095 576 ntTSL 3 BASIC20.02■□□□□ 0.79
NOTCH3Q9UM47 ZBTB12-201ENST00000375527 1875 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
NOTCH3Q9UM47 TCAM1P-201ENST00000463377 452 ntTSL 3 BASIC20.01■□□□□ 0.79
NOTCH3Q9UM47 CERS2-201ENST00000271688 2544 ntAPPRIS P1 TSL 5 BASIC20.01■□□□□ 0.79
NOTCH3Q9UM47 EI24-212ENST00000615917 1407 ntTSL 2 BASIC20.01■□□□□ 0.79
NOTCH3Q9UM47 HES6-205ENST00000409356 528 ntTSL 2 BASIC20.01■□□□□ 0.79
NOTCH3Q9UM47 CAAP1-205ENST00000520187 773 ntTSL 5 BASIC20.01■□□□□ 0.79
NOTCH3Q9UM47 ATP8B2-201ENST00000368487 1523 ntTSL 1 (best) BASIC20■□□□□ 0.79
NOTCH3Q9UM47 GUSB-202ENST00000421103 1742 ntTSL 2 BASIC20■□□□□ 0.79
NOTCH3Q9UM47 RUNX2-203ENST00000371436 1588 ntAPPRIS ALT2 TSL 5 BASIC19.99■□□□□ 0.79
NOTCH3Q9UM47 FKBP1A-210ENST00000614856 562 ntTSL 2 BASIC19.98■□□□□ 0.79
NOTCH3Q9UM47 PIK3R2-208ENST00000617642 1446 ntTSL 5 BASIC19.97■□□□□ 0.79
NOTCH3Q9UM47 ARL6IP4-211ENST00000454885 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
NOTCH3Q9UM47 SSTR4-201ENST00000255008 1427 ntAPPRIS P1 BASIC19.97■□□□□ 0.79
NOTCH3Q9UM47 EMID1-201ENST00000334018 2173 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
NOTCH3Q9UM47 PKIG-207ENST00000372894 1191 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
NOTCH3Q9UM47 HNRNPAB-206ENST00000506339 1747 ntAPPRIS ALT2 TSL 5 BASIC19.96■□□□□ 0.79
NOTCH3Q9UM47 NPTXR-202ENST00000640136 1503 ntAPPRIS P2 TSL 1 (best) BASIC19.95■□□□□ 0.78
NOTCH3Q9UM47 RASSF7-202ENST00000397583 1928 ntAPPRIS P3 TSL 1 (best) BASIC19.95■□□□□ 0.78
NOTCH3Q9UM47 CBX4-201ENST00000269397 2664 ntAPPRIS P2 TSL 1 (best) BASIC19.94■□□□□ 0.78
NOTCH3Q9UM47 HES7-202ENST00000541682 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC19.94■□□□□ 0.78
NOTCH3Q9UM47 PTPMT1-203ENST00000426530 1014 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
NOTCH3Q9UM47 CHML-204ENST00000638121 920 ntTSL 2 BASIC19.94■□□□□ 0.78
NOTCH3Q9UM47 CSPG5-205ENST00000610462 2073 ntTSL 5 BASIC19.93■□□□□ 0.78
NOTCH3Q9UM47 ARL8A-204ENST00000614750 1727 ntTSL 3 BASIC19.93■□□□□ 0.78
NOTCH3Q9UM47 MAPK3-205ENST00000395202 1008 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
NOTCH3Q9UM47 ABHD17AP5-201ENST00000580133 923 ntBASIC19.93■□□□□ 0.78
NOTCH3Q9UM47 RNF126P1-201ENST00000567452 1320 ntBASIC19.93■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 12.7 ms