Protein–RNA interactions for Protein: Q8NDM7

CFAP43, Cilia- and flagella-associated protein 43, humanhuman

Predictions only

Length 1,665 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFAP43Q8NDM7 UBE2S-203ENST00000589978 496 ntTSL 5 BASIC42.03■■■■■ 4.32
CFAP43Q8NDM7 SLC9A3R2-202ENST00000432365 1564 ntTSL 1 (best) BASIC42.03■■■■■ 4.32
CFAP43Q8NDM7 UBE2L6-201ENST00000287156 1354 ntAPPRIS P1 TSL 1 (best) BASIC42■■■■■ 4.31
CFAP43Q8NDM7 STARD10-220ENST00000545082 1085 ntTSL 3 BASIC42■■■■■ 4.31
CFAP43Q8NDM7 PRSS41-201ENST00000399677 1127 ntAPPRIS P1 TSL 5 BASIC42■■■■■ 4.31
CFAP43Q8NDM7 PIGX-201ENST00000296333 953 ntAPPRIS ALT2 TSL 2 BASIC41.99■■■■■ 4.31
CFAP43Q8NDM7 AC007383.2-202ENST00000435627 482 ntTSL 2 BASIC41.99■■■■■ 4.31
CFAP43Q8NDM7 VEGFA-226ENST00000611736 1239 ntTSL 1 (best) BASIC41.99■■■■■ 4.31
CFAP43Q8NDM7 SULT4A1-201ENST00000330884 2468 ntAPPRIS P1 TSL 1 (best) BASIC41.98■■■■■ 4.31
CFAP43Q8NDM7 AL139393.1-201ENST00000417479 573 ntTSL 5 BASIC41.98■■■■■ 4.31
CFAP43Q8NDM7 SCX-201ENST00000567180 999 ntAPPRIS P1 TSL 1 (best) BASIC41.98■■■■■ 4.31
CFAP43Q8NDM7 PDXP-201ENST00000215904 2010 ntAPPRIS P1 TSL 1 (best) BASIC41.98■■■■■ 4.31
CFAP43Q8NDM7 NIT1-201ENST00000368007 1749 ntTSL 2 BASIC41.97■■■■■ 4.31
CFAP43Q8NDM7 GALK1-205ENST00000588479 1866 ntAPPRIS P1 TSL 1 (best) BASIC41.96■■■■■ 4.31
CFAP43Q8NDM7 CGREF1-204ENST00000402550 1575 ntTSL 2 BASIC41.95■■■■■ 4.31
CFAP43Q8NDM7 AC016595.1-201ENST00000559410 383 ntTSL 3 BASIC41.94■■■■■ 4.3
CFAP43Q8NDM7 VEGFA-208ENST00000417285 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC41.93■■■■■ 4.3
CFAP43Q8NDM7 GATA6-202ENST00000581694 2057 ntAPPRIS P1 TSL 1 (best) BASIC41.93■■■■■ 4.3
CFAP43Q8NDM7 MISP3-202ENST00000587086 1535 ntAPPRIS P2 TSL 1 (best) BASIC41.93■■■■■ 4.3
CFAP43Q8NDM7 GRASP-201ENST00000293662 1933 ntAPPRIS P1 TSL 1 (best) BASIC41.9■■■■■ 4.3
CFAP43Q8NDM7 HNRNPAB-206ENST00000506339 1747 ntAPPRIS ALT2 TSL 5 BASIC41.89■■■■■ 4.3
CFAP43Q8NDM7 MAD2L2-207ENST00000376692 1118 ntAPPRIS P1 TSL 1 (best) BASIC41.88■■■■■ 4.29
CFAP43Q8NDM7 KCTD5-202ENST00000564195 774 ntTSL 5 BASIC41.88■■■■■ 4.29
CFAP43Q8NDM7 AC012615.2-201ENST00000586259 447 ntTSL 4 BASIC41.88■■■■■ 4.29
CFAP43Q8NDM7 RRAD-202ENST00000420652 1476 ntAPPRIS P1 TSL 1 (best) BASIC41.87■■■■■ 4.29
CFAP43Q8NDM7 U2AF1L5-201ENST00000610664 897 ntAPPRIS P5 TSL 1 (best) BASIC41.85■■■■■ 4.29
CFAP43Q8NDM7 FKBP1A-210ENST00000614856 562 ntTSL 2 BASIC41.85■■■■■ 4.29
CFAP43Q8NDM7 RARRES2P2-201ENST00000394842 485 ntBASIC41.84■■■■■ 4.29
CFAP43Q8NDM7 ABHD17AP5-201ENST00000580133 923 ntBASIC41.84■■■■■ 4.29
CFAP43Q8NDM7 RHOC-202ENST00000339083 1418 ntAPPRIS P1 TSL 1 (best) BASIC41.84■■■■■ 4.29
CFAP43Q8NDM7 MSRB2-201ENST00000376510 1803 ntAPPRIS P1 TSL 1 (best) BASIC41.83■■■■■ 4.29
CFAP43Q8NDM7 METRNL-202ENST00000570778 967 ntTSL 5 BASIC41.83■■■■■ 4.29
CFAP43Q8NDM7 BTBD19-203ENST00000450269 1572 ntAPPRIS P1 TSL 5 BASIC41.82■■■■■ 4.28
CFAP43Q8NDM7 PCYT2-206ENST00000571105 1628 ntTSL 5 BASIC41.81■■■■■ 4.28
CFAP43Q8NDM7 TMEM229A-201ENST00000455783 2108 ntAPPRIS P1 BASIC41.79■■■■■ 4.28
CFAP43Q8NDM7 SRP68-213ENST00000629930 165 ntTSL 5 BASIC41.79■■■■■ 4.28
CFAP43Q8NDM7 CAAP1-205ENST00000520187 773 ntTSL 5 BASIC41.77■■■■■ 4.28
CFAP43Q8NDM7 RANBP1-202ENST00000402752 1132 ntAPPRIS ALT1 TSL 1 (best) BASIC41.77■■■■■ 4.28
CFAP43Q8NDM7 DUX4L13-201ENST00000554103 1267 ntBASIC41.76■■■■■ 4.28
CFAP43Q8NDM7 DUX4L15-201ENST00000611059 1267 ntBASIC41.76■■■■■ 4.28
CFAP43Q8NDM7 DUX4L23-201ENST00000615195 1269 ntBASIC41.76■■■■■ 4.28
CFAP43Q8NDM7 DUX4L24-201ENST00000617576 1269 ntBASIC41.76■■■■■ 4.28
CFAP43Q8NDM7 DUX4L22-201ENST00000618238 1269 ntBASIC41.76■■■■■ 4.28
CFAP43Q8NDM7 DUX4L20-201ENST00000619712 1269 ntBASIC41.76■■■■■ 4.28
CFAP43Q8NDM7 DUX4L21-201ENST00000622058 1269 ntBASIC41.76■■■■■ 4.28
CFAP43Q8NDM7 DUX4L10-201ENST00000622460 1267 ntBASIC41.76■■■■■ 4.28
CFAP43Q8NDM7 DUX4L25-201ENST00000624915 1269 ntBASIC41.76■■■■■ 4.28
CFAP43Q8NDM7 ATRNL1-209ENST00000609571 1818 ntTSL 1 (best) BASIC41.75■■■■■ 4.27
CFAP43Q8NDM7 GADD45A-205ENST00000617962 1142 ntTSL 1 (best) BASIC41.74■■■■■ 4.27
CFAP43Q8NDM7 AC009041.3-201ENST00000564390 879 ntTSL 5 BASIC41.74■■■■■ 4.27
CFAP43Q8NDM7 CISD3-204ENST00000613478 2074 ntAPPRIS P1 TSL 2 BASIC41.73■■■■■ 4.27
CFAP43Q8NDM7 DTNBP1-202ENST00000344537 1403 ntAPPRIS P1 TSL 1 (best) BASIC41.72■■■■■ 4.27
CFAP43Q8NDM7 EBPL-201ENST00000242827 914 ntAPPRIS P1 TSL 1 (best) BASIC41.71■■■■■ 4.27
CFAP43Q8NDM7 H2AFV-204ENST00000350771 687 ntTSL 2 BASIC41.71■■■■■ 4.27
CFAP43Q8NDM7 HES7-202ENST00000541682 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC41.7■■■■■ 4.27
CFAP43Q8NDM7 AGPAT2-202ENST00000371696 1512 ntAPPRIS P1 TSL 1 (best) BASIC41.7■■■■■ 4.27
CFAP43Q8NDM7 AC004837.3-201ENST00000420748 565 ntTSL 4 BASIC41.69■■■■■ 4.26
CFAP43Q8NDM7 NOXA1-201ENST00000341349 1678 ntAPPRIS P1 TSL 1 (best) BASIC41.68■■■■■ 4.26
CFAP43Q8NDM7 ELOC-207ENST00000522337 816 ntAPPRIS P1 TSL 2 BASIC41.68■■■■■ 4.26
CFAP43Q8NDM7 C11orf95-204ENST00000546282 390 ntTSL 3 BASIC41.67■■■■■ 4.26
CFAP43Q8NDM7 ABHD12-201ENST00000339157 2117 ntAPPRIS P1 TSL 2 BASIC41.66■■■■■ 4.26
CFAP43Q8NDM7 KLC2-205ENST00000394078 1557 ntTSL 5 BASIC41.64■■■■■ 4.26
CFAP43Q8NDM7 EMID1-201ENST00000334018 2173 ntAPPRIS P1 TSL 1 (best) BASIC41.64■■■■■ 4.26
CFAP43Q8NDM7 NPTXR-202ENST00000640136 1503 ntAPPRIS P2 TSL 1 (best) BASIC41.64■■■■■ 4.26
CFAP43Q8NDM7 TSPAN11-203ENST00000545802 1649 ntTSL 1 (best) BASIC41.64■■■■■ 4.26
CFAP43Q8NDM7 DCUN1D5-201ENST00000260247 1337 ntAPPRIS P1 TSL 1 (best) BASIC41.63■■■■■ 4.26
CFAP43Q8NDM7 U2AF1-203ENST00000398137 1019 ntTSL 1 (best) BASIC41.63■■■■■ 4.25
CFAP43Q8NDM7 U2AF1L5-212ENST00000639996 1019 ntTSL 1 (best) BASIC41.63■■■■■ 4.25
CFAP43Q8NDM7 ARL6IP4-211ENST00000454885 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC41.62■■■■■ 4.25
CFAP43Q8NDM7 CRNDE-206ENST00000559432 587 ntTSL 3 BASIC41.61■■■■■ 4.25
CFAP43Q8NDM7 NOG-201ENST00000332822 1892 ntAPPRIS P1 BASIC41.61■■■■■ 4.25
CFAP43Q8NDM7 TCEA2-204ENST00000395053 1733 ntTSL 1 (best) BASIC41.61■■■■■ 4.25
CFAP43Q8NDM7 PTPMT1-203ENST00000426530 1014 ntTSL 1 (best) BASIC41.6■■■■■ 4.25
CFAP43Q8NDM7 PIK3R2-208ENST00000617642 1446 ntTSL 5 BASIC41.59■■■■■ 4.25
CFAP43Q8NDM7 AC068134.2-201ENST00000437095 576 ntTSL 3 BASIC41.58■■■■■ 4.25
CFAP43Q8NDM7 NEURL1B-203ENST00000522853 1263 ntTSL 1 (best) BASIC41.58■■■■■ 4.25
CFAP43Q8NDM7 CNIH2-203ENST00000528852 1524 ntAPPRIS ALT1 TSL 1 (best) BASIC41.58■■■■■ 4.25
CFAP43Q8NDM7 POLR3H-201ENST00000337566 1330 ntTSL 1 (best) BASIC41.57■■■■■ 4.24
CFAP43Q8NDM7 FTCD-203ENST00000397746 1878 ntAPPRIS P1 TSL 1 (best) BASIC41.56■■■■■ 4.24
CFAP43Q8NDM7 GLRX5-201ENST00000331334 1564 ntAPPRIS P1 TSL 1 (best) BASIC41.56■■■■■ 4.24
CFAP43Q8NDM7 VEGFA-202ENST00000324450 954 ntTSL 1 (best) BASIC41.56■■■■■ 4.24
CFAP43Q8NDM7 VEGFA-203ENST00000372055 1286 ntTSL 1 (best) BASIC41.56■■■■■ 4.24
CFAP43Q8NDM7 VEGFA-213ENST00000482630 1146 ntTSL 1 (best) BASIC41.56■■■■■ 4.24
CFAP43Q8NDM7 UBA52-204ENST00000595158 743 ntAPPRIS P1 TSL 3 BASIC41.56■■■■■ 4.24
CFAP43Q8NDM7 VEGFA-227ENST00000615393 984 ntTSL 1 (best) BASIC41.56■■■■■ 4.24
CFAP43Q8NDM7 VEGFA-228ENST00000617771 1116 ntTSL 1 (best) BASIC41.56■■■■■ 4.24
CFAP43Q8NDM7 VEGFA-229ENST00000621747 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC41.56■■■■■ 4.24
CFAP43Q8NDM7 VEGFA-230ENST00000640482 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC41.56■■■■■ 4.24
CFAP43Q8NDM7 VEGFA-232ENST00000640653 1170 ntAPPRIS ALT2 TSL 1 (best) BASIC41.56■■■■■ 4.24
CFAP43Q8NDM7 ATP6V1E2-204ENST00000522587 1559 ntAPPRIS P1 TSL 3 BASIC41.56■■■■■ 4.24
CFAP43Q8NDM7 HES6-205ENST00000409356 528 ntTSL 2 BASIC41.55■■■■■ 4.24
CFAP43Q8NDM7 QDPR-201ENST00000281243 1648 ntAPPRIS P1 TSL 1 (best) BASIC41.55■■■■■ 4.24
CFAP43Q8NDM7 AL161658.1-201ENST00000623641 1967 ntBASIC41.55■■■■■ 4.24
CFAP43Q8NDM7 KHDRBS3-201ENST00000355849 1977 ntAPPRIS P1 TSL 1 (best) BASIC41.53■■■■■ 4.24
CFAP43Q8NDM7 UCK1-201ENST00000372208 2063 ntTSL 1 (best) BASIC41.53■■■■■ 4.24
CFAP43Q8NDM7 JMJD8-216ENST00000609261 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC41.52■■■■■ 4.24
CFAP43Q8NDM7 MLST8-203ENST00000397124 1691 ntAPPRIS P3 TSL 5 BASIC41.52■■■■■ 4.24
CFAP43Q8NDM7 XKR6-201ENST00000297303 1550 ntTSL 1 (best) BASIC41.51■■■■■ 4.24
CFAP43Q8NDM7 MYLIP-202ENST00000356840 1666 ntAPPRIS P1 TSL 1 (best) BASIC41.51■■■■■ 4.24
CFAP43Q8NDM7 AVEN-201ENST00000306730 1605 ntAPPRIS P1 TSL 1 (best) BASIC41.5■■■■■ 4.23
Retrieved 100 of 98,524 protein–RNA pairs in 26.2 ms