Protein–RNA interactions for Protein: Q8N7A1

KLHDC1, Kelch domain-containing protein 1, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KLHDC1Q8N7A1 ST6GALNAC6-203ENST00000373142 2448 ntTSL 1 (best) BASIC21■□□□□ 0.95
KLHDC1Q8N7A1 SLC9A3R2-202ENST00000432365 1564 ntTSL 1 (best) BASIC21■□□□□ 0.95
KLHDC1Q8N7A1 PDXP-201ENST00000215904 2010 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
KLHDC1Q8N7A1 STUB1-201ENST00000219548 1472 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
KLHDC1Q8N7A1 LMTK3-201ENST00000270238 4972 ntAPPRIS P2 TSL 1 (best) BASIC20.99■□□□□ 0.95
KLHDC1Q8N7A1 CIB1-201ENST00000328649 1247 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
KLHDC1Q8N7A1 AC108673.1-201ENST00000510422 1159 ntBASIC20.99■□□□□ 0.95
KLHDC1Q8N7A1 MTMR1-214ENST00000542156 1227 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
KLHDC1Q8N7A1 AP000547.3-202ENST00000592107 1019 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
KLHDC1Q8N7A1 CIB1-202ENST00000612800 1096 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
KLHDC1Q8N7A1 KCNQ5-204ENST00000370392 1469 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
KLHDC1Q8N7A1 TRNP1-201ENST00000522111 1958 ntAPPRIS P2 TSL 1 (best) BASIC20.99■□□□□ 0.95
KLHDC1Q8N7A1 AC096888.1-201ENST00000487097 565 ntTSL 4 BASIC20.98■□□□□ 0.95
KLHDC1Q8N7A1 ARL8A-204ENST00000614750 1727 ntTSL 3 BASIC20.98■□□□□ 0.95
KLHDC1Q8N7A1 MSRB2-201ENST00000376510 1803 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
KLHDC1Q8N7A1 PURG-201ENST00000339382 2693 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
KLHDC1Q8N7A1 AL451007.3-201ENST00000640271 588 ntAPPRIS P1 BASIC20.97■□□□□ 0.95
KLHDC1Q8N7A1 MXI1-201ENST00000239007 2424 ntAPPRIS ALT1 TSL 1 (best) BASIC20.97■□□□□ 0.95
KLHDC1Q8N7A1 CCM2-201ENST00000258781 1894 ntAPPRIS P3 TSL 1 (best) BASIC20.96■□□□□ 0.95
KLHDC1Q8N7A1 HS3ST6-201ENST00000454677 1273 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
KLHDC1Q8N7A1 AC021231.2-201ENST00000594613 730 ntBASIC20.96■□□□□ 0.95
KLHDC1Q8N7A1 GALK1-205ENST00000588479 1866 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
KLHDC1Q8N7A1 IFFO2-203ENST00000455833 6188 ntAPPRIS P1 TSL 5 BASIC20.96■□□□□ 0.95
KLHDC1Q8N7A1 RCE1-201ENST00000309657 1485 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
KLHDC1Q8N7A1 GSC-201ENST00000238558 1264 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
KLHDC1Q8N7A1 AL139393.1-201ENST00000417479 573 ntTSL 5 BASIC20.95■□□□□ 0.94
KLHDC1Q8N7A1 LAPTM4B-203ENST00000521545 915 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
KLHDC1Q8N7A1 UBE2A-207ENST00000628549 934 ntTSL 2 BASIC20.95■□□□□ 0.94
KLHDC1Q8N7A1 FBXO45-201ENST00000311630 5899 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
KLHDC1Q8N7A1 MIR6090-201ENST00000622481 60 ntBASIC20.94■□□□□ 0.94
KLHDC1Q8N7A1 ZBTB12-201ENST00000375527 1875 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
KLHDC1Q8N7A1 CCDC149-203ENST00000502801 1079 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
KLHDC1Q8N7A1 AC187653.1-201ENST00000506382 702 ntAPPRIS P1 TSL 5 BASIC20.93■□□□□ 0.94
KLHDC1Q8N7A1 AGPAT2-202ENST00000371696 1512 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
KLHDC1Q8N7A1 MAPK13-201ENST00000211287 2052 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
KLHDC1Q8N7A1 AC116407.1-201ENST00000398832 1599 ntTSL 2 BASIC20.91■□□□□ 0.94
KLHDC1Q8N7A1 MXD3-203ENST00000439742 1483 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
KLHDC1Q8N7A1 WNT5A-AS1-201ENST00000469484 500 ntTSL 3 BASIC20.91■□□□□ 0.94
KLHDC1Q8N7A1 QKI-207ENST00000453779 5685 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
KLHDC1Q8N7A1 DNLZ-201ENST00000371738 724 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
KLHDC1Q8N7A1 UBE2S-203ENST00000589978 496 ntTSL 5 BASIC20.9■□□□□ 0.94
KLHDC1Q8N7A1 EMID1-201ENST00000334018 2173 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
KLHDC1Q8N7A1 TSPAN11-203ENST00000545802 1649 ntTSL 1 (best) BASIC20.89■□□□□ 0.94
KLHDC1Q8N7A1 HOXD13-201ENST00000392539 2240 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
KLHDC1Q8N7A1 TMEM229A-201ENST00000455783 2108 ntAPPRIS P1 BASIC20.89■□□□□ 0.94
KLHDC1Q8N7A1 BCL7B-201ENST00000223368 1975 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
KLHDC1Q8N7A1 HINT2-201ENST00000259667 628 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
KLHDC1Q8N7A1 DOCK5-202ENST00000410074 786 ntTSL 2 BASIC20.89■□□□□ 0.93
KLHDC1Q8N7A1 CAPNS1-211ENST00000590874 926 ntTSL 5 BASIC20.89■□□□□ 0.93
KLHDC1Q8N7A1 HNRNPAB-206ENST00000506339 1747 ntAPPRIS ALT2 TSL 5 BASIC20.89■□□□□ 0.93
KLHDC1Q8N7A1 MEX3D-201ENST00000402693 2850 ntAPPRIS P2 TSL 1 (best) BASIC20.88■□□□□ 0.93
KLHDC1Q8N7A1 FTCD-202ENST00000397743 1834 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
KLHDC1Q8N7A1 CADPS-215ENST00000490353 2669 ntTSL 5 BASIC20.88■□□□□ 0.93
KLHDC1Q8N7A1 AC013394.1-201ENST00000629685 808 ntAPPRIS P1 TSL 5 BASIC20.88■□□□□ 0.93
KLHDC1Q8N7A1 ECI1-207ENST00000570258 1512 ntAPPRIS ALT2 TSL 5 BASIC20.88■□□□□ 0.93
KLHDC1Q8N7A1 KCNMA1-283ENST00000640523 5425 ntAPPRIS ALT2 TSL 5 BASIC20.87■□□□□ 0.93
KLHDC1Q8N7A1 RP9P-201ENST00000381639 1303 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
KLHDC1Q8N7A1 MISP3-202ENST00000587086 1535 ntAPPRIS P2 TSL 1 (best) BASIC20.87■□□□□ 0.93
KLHDC1Q8N7A1 GATA6-202ENST00000581694 2057 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
KLHDC1Q8N7A1 TPI1-201ENST00000229270 1763 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
KLHDC1Q8N7A1 PI4KAP2-202ENST00000450651 2294 ntTSL 5 BASIC20.87■□□□□ 0.93
KLHDC1Q8N7A1 CACNA1H-201ENST00000348261 8208 ntAPPRIS P4 TSL 1 (best) BASIC20.86■□□□□ 0.93
KLHDC1Q8N7A1 PCYT2-206ENST00000571105 1628 ntTSL 5 BASIC20.86■□□□□ 0.93
KLHDC1Q8N7A1 ACOT12-204ENST00000513751 612 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
KLHDC1Q8N7A1 KHDRBS3-201ENST00000355849 1977 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
KLHDC1Q8N7A1 CHSY1-201ENST00000254190 4550 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
KLHDC1Q8N7A1 CNIH2-203ENST00000528852 1524 ntAPPRIS ALT1 TSL 1 (best) BASIC20.83■□□□□ 0.93
KLHDC1Q8N7A1 GLT8D1-201ENST00000266014 1849 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
KLHDC1Q8N7A1 MRPL9-201ENST00000368829 882 ntAPPRIS ALT2 TSL 2 BASIC20.83■□□□□ 0.93
KLHDC1Q8N7A1 AL589765.4-201ENST00000512280 382 ntTSL 3 BASIC20.83■□□□□ 0.93
KLHDC1Q8N7A1 POLR1D-201ENST00000302979 1166 ntAPPRIS P2 TSL 1 (best) BASIC20.82■□□□□ 0.92
KLHDC1Q8N7A1 PRSS41-201ENST00000399677 1127 ntAPPRIS P1 TSL 5 BASIC20.82■□□□□ 0.92
KLHDC1Q8N7A1 BTBD19-203ENST00000450269 1572 ntAPPRIS P1 TSL 5 BASIC20.81■□□□□ 0.92
KLHDC1Q8N7A1 ZBTB7A-202ENST00000601588 2083 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
KLHDC1Q8N7A1 DDN-AS1-203ENST00000552284 934 ntTSL 3 BASIC20.81■□□□□ 0.92
KLHDC1Q8N7A1 FAM117A-201ENST00000240364 2365 ntAPPRIS P2 TSL 1 (best) BASIC20.81■□□□□ 0.92
KLHDC1Q8N7A1 PIK3R2-208ENST00000617642 1446 ntTSL 5 BASIC20.8■□□□□ 0.92
KLHDC1Q8N7A1 DTNBP1-202ENST00000344537 1403 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
KLHDC1Q8N7A1 RNF166-209ENST00000567844 633 ntTSL 5 BASIC20.79■□□□□ 0.92
KLHDC1Q8N7A1 KLC2-205ENST00000394078 1557 ntTSL 5 BASIC20.79■□□□□ 0.92
KLHDC1Q8N7A1 ATRNL1-209ENST00000609571 1818 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
KLHDC1Q8N7A1 OSBP-201ENST00000263847 5083 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
KLHDC1Q8N7A1 MACF1-219ENST00000484793 834 ntTSL 2 BASIC20.78■□□□□ 0.92
KLHDC1Q8N7A1 RPS2-202ENST00000526522 924 ntTSL 2 BASIC20.78■□□□□ 0.92
KLHDC1Q8N7A1 U2AF1L5-201ENST00000610664 897 ntAPPRIS P5 TSL 1 (best) BASIC20.78■□□□□ 0.92
KLHDC1Q8N7A1 VEGFA-226ENST00000611736 1239 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
KLHDC1Q8N7A1 NOXA1-201ENST00000341349 1678 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
KLHDC1Q8N7A1 ATP6V1E2-204ENST00000522587 1559 ntAPPRIS P1 TSL 3 BASIC20.76■□□□□ 0.91
KLHDC1Q8N7A1 ABHD12-201ENST00000339157 2117 ntAPPRIS P1 TSL 2 BASIC20.76■□□□□ 0.91
KLHDC1Q8N7A1 AC092647.5-201ENST00000426595 1732 ntAPPRIS P1 TSL 5 BASIC20.75■□□□□ 0.91
KLHDC1Q8N7A1 PLEKHJ1-201ENST00000326631 1206 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
KLHDC1Q8N7A1 LINC01971-201ENST00000617888 1048 ntBASIC20.75■□□□□ 0.91
KLHDC1Q8N7A1 MATK-201ENST00000310132 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
KLHDC1Q8N7A1 MLST8-203ENST00000397124 1691 ntAPPRIS P3 TSL 5 BASIC20.73■□□□□ 0.91
KLHDC1Q8N7A1 MSX1-201ENST00000382723 1939 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
KLHDC1Q8N7A1 CHPT1-201ENST00000229266 1585 ntAPPRIS P2 TSL 1 (best) BASIC20.72■□□□□ 0.91
KLHDC1Q8N7A1 GLRX5-201ENST00000331334 1564 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
KLHDC1Q8N7A1 GLRB-203ENST00000509282 1757 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
KLHDC1Q8N7A1 DUX4L11-201ENST00000611504 1267 ntBASIC20.72■□□□□ 0.91
KLHDC1Q8N7A1 DUX4L12-201ENST00000614593 1267 ntBASIC20.72■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 18.2 ms