Protein–RNA interactions for Protein: Q5THJ4

VPS13D, Vacuolar protein sorting-associated protein 13D, humanhuman

Predictions only

Length 4,388 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13DQ5THJ4 BRD4-212ENST00000630599 726 ntTSL 2 BASIC18.18■□□□□ 0.5
VPS13DQ5THJ4 STK25-202ENST00000401869 2251 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
VPS13DQ5THJ4 CAAP1-205ENST00000520187 773 ntTSL 5 BASIC18.16■□□□□ 0.5
VPS13DQ5THJ4 METRNL-202ENST00000570778 967 ntTSL 5 BASIC18.16■□□□□ 0.5
VPS13DQ5THJ4 KCNQ5-204ENST00000370392 1469 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
VPS13DQ5THJ4 HES6-205ENST00000409356 528 ntTSL 2 BASIC18.16■□□□□ 0.5
VPS13DQ5THJ4 STARD10-220ENST00000545082 1085 ntTSL 3 BASIC18.16■□□□□ 0.5
VPS13DQ5THJ4 RUNX2-211ENST00000625924 1458 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
VPS13DQ5THJ4 U2AF1L5-201ENST00000610664 897 ntAPPRIS P5 TSL 1 (best) BASIC18.15■□□□□ 0.5
VPS13DQ5THJ4 RARRES2P2-201ENST00000394842 485 ntBASIC18.15■□□□□ 0.5
VPS13DQ5THJ4 U2AF1-203ENST00000398137 1019 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
VPS13DQ5THJ4 U2AF1L5-212ENST00000639996 1019 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
VPS13DQ5THJ4 SAMD1-202ENST00000533683 2164 ntAPPRIS P5 TSL 1 (best) BASIC18.14■□□□□ 0.5
VPS13DQ5THJ4 VPS37D-201ENST00000324941 1624 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
VPS13DQ5THJ4 ADRA2C-202ENST00000509482 1600 ntTSL 3 BASIC18.14■□□□□ 0.49
VPS13DQ5THJ4 SLC2A4RG-201ENST00000266077 1731 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
VPS13DQ5THJ4 EBPL-201ENST00000242827 914 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
VPS13DQ5THJ4 POLR3H-201ENST00000337566 1330 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
VPS13DQ5THJ4 PPP4R4-202ENST00000328839 876 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
VPS13DQ5THJ4 PIGX-201ENST00000296333 953 ntAPPRIS ALT2 TSL 2 BASIC18.13■□□□□ 0.49
VPS13DQ5THJ4 BTBD19-203ENST00000450269 1572 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
VPS13DQ5THJ4 SSTR4-201ENST00000255008 1427 ntAPPRIS P1 BASIC18.12■□□□□ 0.49
VPS13DQ5THJ4 NME2-205ENST00000512737 826 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
VPS13DQ5THJ4 ANGPTL6-204ENST00000592641 1781 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
VPS13DQ5THJ4 MYLIP-202ENST00000356840 1666 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
VPS13DQ5THJ4 KCTD5-202ENST00000564195 774 ntTSL 5 BASIC18.11■□□□□ 0.49
VPS13DQ5THJ4 SMDT1-201ENST00000331479 1567 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
VPS13DQ5THJ4 SRP68-213ENST00000629930 165 ntTSL 5 BASIC18.1■□□□□ 0.49
VPS13DQ5THJ4 TMEM251-202ENST00000415050 1303 ntTSL 2 BASIC18.1■□□□□ 0.49
VPS13DQ5THJ4 CCZ1-201ENST00000325974 1802 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
VPS13DQ5THJ4 TUBB6-201ENST00000317702 2064 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
VPS13DQ5THJ4 FOXD1-202ENST00000615637 2272 ntAPPRIS P1 BASIC18.1■□□□□ 0.49
VPS13DQ5THJ4 PCYT2-206ENST00000571105 1628 ntTSL 5 BASIC18.1■□□□□ 0.49
VPS13DQ5THJ4 RANBP1-202ENST00000402752 1132 ntAPPRIS ALT1 TSL 1 (best) BASIC18.09■□□□□ 0.49
VPS13DQ5THJ4 AC004837.3-201ENST00000420748 565 ntTSL 4 BASIC18.09■□□□□ 0.49
VPS13DQ5THJ4 ARL8A-204ENST00000614750 1727 ntTSL 3 BASIC18.09■□□□□ 0.49
VPS13DQ5THJ4 AC012615.2-201ENST00000586259 447 ntTSL 4 BASIC18.08■□□□□ 0.49
VPS13DQ5THJ4 FMR1-219ENST00000621453 1864 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
VPS13DQ5THJ4 CLTA-207ENST00000470744 1102 ntTSL 2 BASIC18.08■□□□□ 0.48
VPS13DQ5THJ4 TCAM1P-201ENST00000463377 452 ntTSL 3 BASIC18.07■□□□□ 0.48
VPS13DQ5THJ4 ZBTB25-202ENST00000555220 1440 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
VPS13DQ5THJ4 RDX-206ENST00000528900 1814 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
VPS13DQ5THJ4 PLEKHG6-206ENST00000536531 1683 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
VPS13DQ5THJ4 WHRN-203ENST00000374057 1718 ntTSL 2 BASIC18.07■□□□□ 0.48
VPS13DQ5THJ4 PKIG-207ENST00000372894 1191 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
VPS13DQ5THJ4 TMEM114-202ENST00000568335 899 ntTSL 3 BASIC18.07■□□□□ 0.48
VPS13DQ5THJ4 IGFBP2-201ENST00000233809 1439 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
VPS13DQ5THJ4 PTPMT1-203ENST00000426530 1014 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
VPS13DQ5THJ4 CHML-204ENST00000638121 920 ntTSL 2 BASIC18.06■□□□□ 0.48
VPS13DQ5THJ4 AP002884.3-203ENST00000419895 1711 ntTSL 2 BASIC18.06■□□□□ 0.48
VPS13DQ5THJ4 NOG-201ENST00000332822 1892 ntAPPRIS P1 BASIC18.06■□□□□ 0.48
VPS13DQ5THJ4 PIK3R2-208ENST00000617642 1446 ntTSL 5 BASIC18.06■□□□□ 0.48
VPS13DQ5THJ4 TRNP1-201ENST00000522111 1958 ntAPPRIS P2 TSL 1 (best) BASIC18.06■□□□□ 0.48
VPS13DQ5THJ4 SCX-201ENST00000567180 999 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
VPS13DQ5THJ4 AC231981.1-201ENST00000450917 974 ntTSL 3 BASIC18.05■□□□□ 0.48
VPS13DQ5THJ4 C16orf95-206ENST00000618367 974 ntAPPRIS ALT2 TSL 2 BASIC18.04■□□□□ 0.48
VPS13DQ5THJ4 RUNX2-203ENST00000371436 1588 ntAPPRIS ALT2 TSL 5 BASIC18.04■□□□□ 0.48
VPS13DQ5THJ4 ATP8B2-201ENST00000368487 1523 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
VPS13DQ5THJ4 TSPAN11-203ENST00000545802 1649 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
VPS13DQ5THJ4 AP000251.1-201ENST00000433071 822 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
VPS13DQ5THJ4 XKR6-201ENST00000297303 1550 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
VPS13DQ5THJ4 NPTXR-202ENST00000640136 1503 ntAPPRIS P2 TSL 1 (best) BASIC18.02■□□□□ 0.48
VPS13DQ5THJ4 AC105285.1-201ENST00000500914 2036 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
VPS13DQ5THJ4 GADD45A-205ENST00000617962 1142 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
VPS13DQ5THJ4 TCEA2-204ENST00000395053 1733 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
VPS13DQ5THJ4 ZBTB12-201ENST00000375527 1875 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
VPS13DQ5THJ4 SNTG2-201ENST00000308624 1888 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
VPS13DQ5THJ4 AC009041.3-201ENST00000564390 879 ntTSL 5 BASIC18■□□□□ 0.47
VPS13DQ5THJ4 RNF126P1-201ENST00000567452 1320 ntBASIC18■□□□□ 0.47
VPS13DQ5THJ4 LINC00273-201ENST00000539813 1452 ntBASIC18■□□□□ 0.47
VPS13DQ5THJ4 FTCD-202ENST00000397743 1834 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
VPS13DQ5THJ4 LINC01918-201ENST00000436841 797 ntTSL 2 BASIC17.98■□□□□ 0.47
VPS13DQ5THJ4 NOP53-201ENST00000246802 1528 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
VPS13DQ5THJ4 ABHD12-201ENST00000339157 2117 ntAPPRIS P1 TSL 2 BASIC17.97■□□□□ 0.47
VPS13DQ5THJ4 AC005540.1-201ENST00000413911 919 ntTSL 3 BASIC17.97■□□□□ 0.47
VPS13DQ5THJ4 CHST12-204ENST00000618655 2131 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
VPS13DQ5THJ4 VEGFA-202ENST00000324450 954 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
VPS13DQ5THJ4 VEGFA-203ENST00000372055 1286 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
VPS13DQ5THJ4 BOK-AS1-201ENST00000434306 643 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
VPS13DQ5THJ4 VEGFA-213ENST00000482630 1146 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
VPS13DQ5THJ4 VEGFA-227ENST00000615393 984 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
VPS13DQ5THJ4 VEGFA-228ENST00000617771 1116 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
VPS13DQ5THJ4 VEGFA-229ENST00000621747 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
VPS13DQ5THJ4 VEGFA-230ENST00000640482 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
VPS13DQ5THJ4 VEGFA-232ENST00000640653 1170 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
VPS13DQ5THJ4 S1PR4-201ENST00000246115 1565 ntAPPRIS P1 BASIC17.97■□□□□ 0.47
VPS13DQ5THJ4 ABHD17AP5-201ENST00000580133 923 ntBASIC17.97■□□□□ 0.47
VPS13DQ5THJ4 BLOC1S3-202ENST00000587722 732 ntAPPRIS P1 BASIC17.97■□□□□ 0.47
VPS13DQ5THJ4 RPS20-211ENST00000524349 752 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
VPS13DQ5THJ4 MTCP1-202ENST00000369476 2274 ntAPPRIS P1 TSL 3 BASIC17.96■□□□□ 0.47
VPS13DQ5THJ4 EBAG9-202ENST00000395785 1467 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
VPS13DQ5THJ4 C7orf50-202ENST00000397098 2131 ntAPPRIS P2 TSL 1 (best) BASIC17.95■□□□□ 0.46
VPS13DQ5THJ4 HNRNPAB-206ENST00000506339 1747 ntAPPRIS ALT2 TSL 5 BASIC17.95■□□□□ 0.46
VPS13DQ5THJ4 BATF3-201ENST00000243440 980 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
VPS13DQ5THJ4 ARL6IP4-211ENST00000454885 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
VPS13DQ5THJ4 AP000911.3-201ENST00000526377 1130 ntTSL 3 BASIC17.93■□□□□ 0.46
VPS13DQ5THJ4 JMJD8-202ENST00000562111 823 ntTSL 2 BASIC17.93■□□□□ 0.46
VPS13DQ5THJ4 GLRX5-201ENST00000331334 1564 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
VPS13DQ5THJ4 SSBP3-204ENST00000371320 2077 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
VPS13DQ5THJ4 HES7-202ENST00000541682 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 26.1 ms