Protein–RNA interactions for Protein: Q04172

SHE9, Sensitive to high expression protein 9, mitochondrial, yeastyeast

Predictions only

Length 456 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
SHE9Q04172 ILV2YMR108W 2064 nt9.07□□□□□ -0.96
SHE9Q04172 YPL222C-AYPL222C-A 246 nt9.06□□□□□ -0.96
SHE9Q04172 ITR2YOL103W 1830 nt9.05□□□□□ -0.96
SHE9Q04172 YDR455CYDR455C 309 nt9.05□□□□□ -0.96
SHE9Q04172 TOM20YGR082W 552 nt9.05□□□□□ -0.96
SHE9Q04172 URA8YJR103W 1737 nt9.04□□□□□ -0.96
SHE9Q04172 SAM3YPL274W 1764 nt9.04□□□□□ -0.96
SHE9Q04172 SMM1YNR015W 1155 nt9.03□□□□□ -0.96
SHE9Q04172 LSB5YCL034W 1065 nt9.03□□□□□ -0.96
SHE9Q04172 EAF3YPR023C 1206 nt9.02□□□□□ -0.97
SHE9Q04172 GTB1YDR221W 2109 nt9□□□□□ -0.97
SHE9Q04172 RAD23YEL037C 1197 nt9□□□□□ -0.97
SHE9Q04172 OYE2YHR179W 1203 nt9□□□□□ -0.97
SHE9Q04172 YMR262WYMR262W 942 nt9□□□□□ -0.97
SHE9Q04172 VMA11YPL234C 495 nt9□□□□□ -0.97
SHE9Q04172 TIP1YBR067C 633 nt9□□□□□ -0.97
SHE9Q04172 GND1YHR183W 1470 nt9□□□□□ -0.97
SHE9Q04172 LSM5YER146W 282 nt8.99□□□□□ -0.97
SHE9Q04172 RPT5YOR117W 1305 nt8.99□□□□□ -0.97
SHE9Q04172 AGP3YFL055W 1677 nt8.98□□□□□ -0.97
SHE9Q04172 ABZ2YMR289W 1125 nt8.97□□□□□ -0.97
SHE9Q04172 ERG13YML126C 1476 nt8.96□□□□□ -0.97
SHE9Q04172 TPS1YBR126C 1488 nt8.96□□□□□ -0.97
SHE9Q04172 CAB5YDR196C 726 nt8.96□□□□□ -0.98
SHE9Q04172 PUS5YLR165C 765 nt8.96□□□□□ -0.98
SHE9Q04172 RFC1YOR217W 2586 nt8.96□□□□□ -0.98
SHE9Q04172 HXK1YFR053C 1458 nt8.96□□□□□ -0.98
SHE9Q04172 ALD5YER073W 1563 nt8.95□□□□□ -0.98
SHE9Q04172 RPC31YNL151C 756 nt8.95□□□□□ -0.98
SHE9Q04172 RIM2YBR192W 1134 nt8.95□□□□□ -0.98
SHE9Q04172 DTR1YBR180W 1719 nt8.94□□□□□ -0.98
SHE9Q04172 SNX3YOR357C 489 nt8.94□□□□□ -0.98
SHE9Q04172 RIB3YDR487C 627 nt8.93□□□□□ -0.98
SHE9Q04172 DDI1YER143W 1287 nt8.93□□□□□ -0.98
SHE9Q04172 SAC7YDR389W 1965 nt8.93□□□□□ -0.98
SHE9Q04172 DPL1YDR294C 1770 nt8.92□□□□□ -0.98
SHE9Q04172 YJL055WYJL055W 738 nt8.91□□□□□ -0.98
SHE9Q04172 NBA1YOL070C 1506 nt8.9□□□□□ -0.98
SHE9Q04172 YFL015W-AYFL015W-A 318 nt8.9□□□□□ -0.98
SHE9Q04172 PCP1YGR101W 1041 nt8.9□□□□□ -0.98
SHE9Q04172 LOT5YKL183W 921 nt8.9□□□□□ -0.98
SHE9Q04172 KRR1YCL059C 951 nt8.89□□□□□ -0.99
SHE9Q04172 FHN1YGR131W 525 nt8.89□□□□□ -0.99
SHE9Q04172 YLR111WYLR111W 333 nt8.89□□□□□ -0.99
SHE9Q04172 YNL067W-AYNL067W-A 147 nt8.89□□□□□ -0.99
SHE9Q04172 YOR072WYOR072W 315 nt8.89□□□□□ -0.99
SHE9Q04172 LEU4YNL104C 1860 nt8.88□□□□□ -0.99
SHE9Q04172 TMA23YMR269W 636 nt8.88□□□□□ -0.99
SHE9Q04172 INH1YDL181W 258 nt8.87□□□□□ -0.99
SHE9Q04172 VRG4YGL225W 1014 nt8.87□□□□□ -0.99
SHE9Q04172 REC114YMR133W 1287 nt8.87□□□□□ -0.99
SHE9Q04172 KDX1YKL161C 1302 nt8.86□□□□□ -0.99
SHE9Q04172 GAL2YLR081W 1725 nt8.86□□□□□ -0.99
SHE9Q04172 BNS1YGR230W 414 nt8.86□□□□□ -0.99
SHE9Q04172 LSB3YFR024C-A 1380 nt8.86□□□□□ -0.99
SHE9Q04172 YRF1-2YER190W 5046 nt8.86□□□□□ -0.99
SHE9Q04172 ELO1YJL196C 933 nt8.85□□□□□ -0.99
SHE9Q04172 HXT12YIL170W 1374 nt8.84□□□□□ -0.99
SHE9Q04172 RRT8YOL048C 1029 nt8.83□□□□□ -1
SHE9Q04172 THI72YOR192C 1800 nt8.82□□□□□ -1
SHE9Q04172 YLR437C-AYLR437C-A 228 nt8.82□□□□□ -1
SHE9Q04172 RIB7YBR153W 735 nt8.82□□□□□ -1
SHE9Q04172 YMR265CYMR265C 1386 nt8.82□□□□□ -1
SHE9Q04172 GAL3YDR009W 1563 nt8.82□□□□□ -1
SHE9Q04172 IMO32YGR031W 1029 nt8.81□□□□□ -1
SHE9Q04172 YNR064CYNR064C 873 nt8.8□□□□□ -1
SHE9Q04172 NPP2YEL016C 1482 nt8.8□□□□□ -1
SHE9Q04172 TOK1YJL093C 2076 nt8.79□□□□□ -1
SHE9Q04172 GLR1YPL091W 1452 nt8.79□□□□□ -1
SHE9Q04172 YDR467CYDR467C 327 nt8.78□□□□□ -1
SHE9Q04172 HAP5YOR358W 729 nt8.78□□□□□ -1
SHE9Q04172 FET5YFL041W 1869 nt8.78□□□□□ -1
SHE9Q04172 MEX67YPL169C 1800 nt8.77□□□□□ -1
SHE9Q04172 SUV3YPL029W 2214 nt8.77□□□□□ -1.01
SHE9Q04172 ADE8YDR408C 645 nt8.77□□□□□ -1.01
SHE9Q04172 YJR114WYJR114W 393 nt8.77□□□□□ -1.01
SHE9Q04172 ATG17YLR423C 1254 nt8.77□□□□□ -1.01
SHE9Q04172 tD(GUC)BtD(GUC)B 72 nt8.76□□□□□ -1.01
SHE9Q04172 tD(GUC)DtD(GUC)D 72 nt8.76□□□□□ -1.01
SHE9Q04172 tD(GUC)G1tD(GUC)G1 72 nt8.76□□□□□ -1.01
SHE9Q04172 tD(GUC)G2tD(GUC)G2 72 nt8.76□□□□□ -1.01
SHE9Q04172 tD(GUC)I1tD(GUC)I1 72 nt8.76□□□□□ -1.01
SHE9Q04172 tD(GUC)I2tD(GUC)I2 72 nt8.76□□□□□ -1.01
SHE9Q04172 tD(GUC)J1tD(GUC)J1 72 nt8.76□□□□□ -1.01
SHE9Q04172 tD(GUC)J2tD(GUC)J2 72 nt8.76□□□□□ -1.01
SHE9Q04172 tD(GUC)J3tD(GUC)J3 72 nt8.76□□□□□ -1.01
SHE9Q04172 tD(GUC)J4tD(GUC)J4 72 nt8.76□□□□□ -1.01
SHE9Q04172 tD(GUC)KtD(GUC)K 72 nt8.76□□□□□ -1.01
SHE9Q04172 tD(GUC)L1tD(GUC)L1 72 nt8.76□□□□□ -1.01
SHE9Q04172 tD(GUC)L2tD(GUC)L2 72 nt8.76□□□□□ -1.01
SHE9Q04172 tD(GUC)MtD(GUC)M 72 nt8.76□□□□□ -1.01
SHE9Q04172 tD(GUC)OtD(GUC)O 72 nt8.76□□□□□ -1.01
SHE9Q04172 tE(CUC)DtE(CUC)D 72 nt8.76□□□□□ -1.01
SHE9Q04172 tE(CUC)ItE(CUC)I 72 nt8.76□□□□□ -1.01
SHE9Q04172 PAM17YKR065C 594 nt8.76□□□□□ -1.01
SHE9Q04172 RPN14YGL004C 1254 nt8.75□□□□□ -1.01
SHE9Q04172 YHM2YMR241W 945 nt8.75□□□□□ -1.01
SHE9Q04172 RIB2YOL066C 1776 nt8.75□□□□□ -1.01
SHE9Q04172 KEL3YPL263C 1956 nt8.75□□□□□ -1.01
SHE9Q04172 OPI3YJR073C 621 nt8.73□□□□□ -1.01
Retrieved 100 of 7,029 protein–RNA pairs in 12.7 ms