Protein–RNA interactions for Protein: P40073

SHO1, High osmolarity signaling protein SHO1, yeastyeast

Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
SHO1P40073 YDR455CYDR455C 309 nt7.86□□□□□ -1.15
SHO1P40073 PAU5YFL020C 369 nt7.86□□□□□ -1.15
SHO1P40073 GSF2YML048W 1212 nt7.86□□□□□ -1.15
SHO1P40073 YMR262WYMR262W 942 nt7.86□□□□□ -1.15
SHO1P40073 YOR325WYOR325W 474 nt7.86□□□□□ -1.15
SHO1P40073 ACO2YJL200C 2370 nt7.86□□□□□ -1.15
SHO1P40073 NME1NME1 340 nt7.84□□□□□ -1.15
SHO1P40073 SPS100YHR139C 981 nt7.83□□□□□ -1.16
SHO1P40073 TUB4YLR212C 1422 nt7.83□□□□□ -1.16
SHO1P40073 ERG13YML126C 1476 nt7.82□□□□□ -1.16
SHO1P40073 YDR510C-AYDR510C-A 117 nt7.82□□□□□ -1.16
SHO1P40073 ENT4YLL038C 744 nt7.82□□□□□ -1.16
SHO1P40073 LSB6YJL100W 1824 nt7.8□□□□□ -1.16
SHO1P40073 YFR036W-AYFR036W-A 651 nt7.8□□□□□ -1.16
SHO1P40073 SEN2YLR105C 1134 nt7.8□□□□□ -1.16
SHO1P40073 PAR32YDL173W 888 nt7.79□□□□□ -1.16
SHO1P40073 TVP23YDR084C 600 nt7.79□□□□□ -1.16
SHO1P40073 NIF3YGL221C 867 nt7.79□□□□□ -1.16
SHO1P40073 AIM1YAL046C 357 nt7.79□□□□□ -1.16
SHO1P40073 HEM14YER014W 1620 nt7.78□□□□□ -1.16
SHO1P40073 MUP1YGR055W 1725 nt7.78□□□□□ -1.16
SHO1P40073 ADE8YDR408C 645 nt7.78□□□□□ -1.16
SHO1P40073 NAP1YKR048C 1254 nt7.78□□□□□ -1.16
SHO1P40073 HOL1YNR055C 1761 nt7.77□□□□□ -1.17
SHO1P40073 DIG1YPL049C 1359 nt7.77□□□□□ -1.17
SHO1P40073 BET2YPR176C 978 nt7.77□□□□□ -1.17
SHO1P40073 APS2YJR058C 444 nt7.76□□□□□ -1.17
SHO1P40073 YJR114WYJR114W 393 nt7.76□□□□□ -1.17
SHO1P40073 SAC7YDR389W 1965 nt7.75□□□□□ -1.17
SHO1P40073 ARO8YGL202W 1503 nt7.74□□□□□ -1.17
SHO1P40073 OPI3YJR073C 621 nt7.73□□□□□ -1.17
SHO1P40073 QDR2YIL121W 1629 nt7.72□□□□□ -1.17
SHO1P40073 YJL064WYJL064W 396 nt7.72□□□□□ -1.17
SHO1P40073 YLR046CYLR046C 813 nt7.72□□□□□ -1.17
SHO1P40073 ABZ2YMR289W 1125 nt7.72□□□□□ -1.17
SHO1P40073 MAS1YLR163C 1389 nt7.71□□□□□ -1.17
SHO1P40073 COQ8YGL119W 1506 nt7.7□□□□□ -1.18
SHO1P40073 PAU19YMR325W 375 nt7.7□□□□□ -1.18
SHO1P40073 PUP1YOR157C 786 nt7.7□□□□□ -1.18
SHO1P40073 KES1YPL145C 1305 nt7.69□□□□□ -1.18
SHO1P40073 YNR064CYNR064C 873 nt7.68□□□□□ -1.18
SHO1P40073 IGD1YFR017C 588 nt7.67□□□□□ -1.18
SHO1P40073 DLD3YEL071W 1491 nt7.67□□□□□ -1.18
SHO1P40073 SGA1YIL099W 1650 nt7.66□□□□□ -1.18
SHO1P40073 ZAP1YJL056C 2643 nt7.65□□□□□ -1.18
SHO1P40073 CDD1YLR245C 429 nt7.65□□□□□ -1.18
SHO1P40073 YRF1-2YER190W 5046 nt7.64□□□□□ -1.19
SHO1P40073 MCM5YLR274W 2328 nt7.64□□□□□ -1.19
SHO1P40073 AMF1YOR378W 1548 nt7.64□□□□□ -1.19
SHO1P40073 THP3YPR045C 1413 nt7.63□□□□□ -1.19
SHO1P40073 KEL3YPL263C 1956 nt7.63□□□□□ -1.19
SHO1P40073 PCP1YGR101W 1041 nt7.63□□□□□ -1.19
SHO1P40073 NAS2YIL007C 663 nt7.63□□□□□ -1.19
SHO1P40073 FSH2YMR222C 672 nt7.63□□□□□ -1.19
SHO1P40073 ITR2YOL103W 1830 nt7.63□□□□□ -1.19
SHO1P40073 YHR219WYHR219W 1875 nt7.62□□□□□ -1.19
SHO1P40073 GID8YMR135C 1368 nt7.61□□□□□ -1.19
SHO1P40073 ENO2YHR174W 1314 nt7.61□□□□□ -1.19
SHO1P40073 KRE1YNL322C 942 nt7.61□□□□□ -1.19
SHO1P40073 HIS2YFR025C 1008 nt7.6□□□□□ -1.19
SHO1P40073 UGP1YKL035W 1500 nt7.6□□□□□ -1.19
SHO1P40073 FRA1YLL029W 2250 nt7.59□□□□□ -1.19
SHO1P40073 ELO1YJL196C 933 nt7.59□□□□□ -1.19
SHO1P40073 SWT21YNL187W 1074 nt7.59□□□□□ -1.19
SHO1P40073 VMA11YPL234C 495 nt7.59□□□□□ -1.19
SHO1P40073 LEU2YCL018W 1095 nt7.59□□□□□ -1.19
SHO1P40073 SUV3YPL029W 2214 nt7.58□□□□□ -1.2
SHO1P40073 TPC1YGR096W 945 nt7.58□□□□□ -1.2
SHO1P40073 SFL1YOR140W 2301 nt7.58□□□□□ -1.2
SHO1P40073 YKL133CYKL133C 1392 nt7.58□□□□□ -1.2
SHO1P40073 YMR265CYMR265C 1386 nt7.58□□□□□ -1.2
SHO1P40073 tA(AGC)DtA(AGC)D 73 nt7.57□□□□□ -1.2
SHO1P40073 tA(AGC)FtA(AGC)F 73 nt7.57□□□□□ -1.2
SHO1P40073 tA(AGC)GtA(AGC)G 73 nt7.57□□□□□ -1.2
SHO1P40073 tA(AGC)HtA(AGC)H 73 nt7.57□□□□□ -1.2
SHO1P40073 tA(AGC)JtA(AGC)J 73 nt7.57□□□□□ -1.2
SHO1P40073 tA(AGC)K1tA(AGC)K1 73 nt7.57□□□□□ -1.2
SHO1P40073 tA(AGC)K2tA(AGC)K2 73 nt7.57□□□□□ -1.2
SHO1P40073 tA(AGC)LtA(AGC)L 73 nt7.57□□□□□ -1.2
SHO1P40073 tA(AGC)M1tA(AGC)M1 73 nt7.57□□□□□ -1.2
SHO1P40073 tA(AGC)M2tA(AGC)M2 73 nt7.57□□□□□ -1.2
SHO1P40073 tA(AGC)PtA(AGC)P 73 nt7.57□□□□□ -1.2
SHO1P40073 IPL1YPL209C 1104 nt7.57□□□□□ -1.2
SHO1P40073 snR31snR31 225 nt7.57□□□□□ -1.2
SHO1P40073 MRS6YOR370C 1812 nt7.57□□□□□ -1.2
SHO1P40073 YHL008CYHL008C 1884 nt7.56□□□□□ -1.2
SHO1P40073 RPN14YGL004C 1254 nt7.56□□□□□ -1.2
SHO1P40073 TIM44YIL022W 1296 nt7.56□□□□□ -1.2
SHO1P40073 SPE2YOL052C 1191 nt7.56□□□□□ -1.2
SHO1P40073 HAP5YOR358W 729 nt7.56□□□□□ -1.2
SHO1P40073 KRR1YCL059C 951 nt7.55□□□□□ -1.2
SHO1P40073 CWP2YKL096W-A 279 nt7.55□□□□□ -1.2
SHO1P40073 TIP1YBR067C 633 nt7.55□□□□□ -1.2
SHO1P40073 RPD3YNL330C 1302 nt7.54□□□□□ -1.2
SHO1P40073 SLG1YOR008C 1137 nt7.54□□□□□ -1.2
SHO1P40073 MET1YKR069W 1782 nt7.54□□□□□ -1.2
SHO1P40073 PHB2YGR231C 933 nt7.53□□□□□ -1.2
SHO1P40073 FLX1YIL134W 936 nt7.53□□□□□ -1.2
SHO1P40073 LSR1LSR1 1175 nt7.53□□□□□ -1.2
SHO1P40073 NAM8YHR086W 1572 nt7.52□□□□□ -1.21
Retrieved 100 of 7,029 protein–RNA pairs in 12.5 ms