Protein–RNA interactions for Protein: P38959

VPS41, Vacuolar protein sorting-associated protein 41, yeastyeast

Predictions only

Length 992 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
VPS41P38959 HBS1YKR084C 1836 nt9.31□□□□□ -0.92
VPS41P38959 YDR455CYDR455C 309 nt9.31□□□□□ -0.92
VPS41P38959 AIM45YPR004C 1035 nt9.31□□□□□ -0.92
VPS41P38959 YFL015W-AYFL015W-A 318 nt9.3□□□□□ -0.92
VPS41P38959 ASP3-1YLR155C 1089 nt9.3□□□□□ -0.92
VPS41P38959 ASP3-2YLR157C 1089 nt9.3□□□□□ -0.92
VPS41P38959 ASP3-3YLR158C 1089 nt9.3□□□□□ -0.92
VPS41P38959 ASP3-4YLR160C 1089 nt9.3□□□□□ -0.92
VPS41P38959 SNX3YOR357C 489 nt9.3□□□□□ -0.92
VPS41P38959 NPP2YEL016C 1482 nt9.29□□□□□ -0.92
VPS41P38959 LSM5YER146W 282 nt9.29□□□□□ -0.92
VPS41P38959 GPN2YOR262W 1044 nt9.29□□□□□ -0.92
VPS41P38959 KRR1YCL059C 951 nt9.27□□□□□ -0.93
VPS41P38959 UFD1YGR048W 1086 nt9.27□□□□□ -0.93
VPS41P38959 DUR3YHL016C 2208 nt9.27□□□□□ -0.93
VPS41P38959 FIT1YDR534C 1587 nt9.25□□□□□ -0.93
VPS41P38959 RAS2YNL098C 969 nt9.25□□□□□ -0.93
VPS41P38959 CSM1YCR086W 573 nt9.23□□□□□ -0.93
VPS41P38959 RBG1YAL036C 1110 nt9.22□□□□□ -0.93
VPS41P38959 YLR279WYLR279W 390 nt9.22□□□□□ -0.93
VPS41P38959 MAS1YLR163C 1389 nt9.22□□□□□ -0.93
VPS41P38959 FCY21YER060W 1587 nt9.21□□□□□ -0.93
VPS41P38959 tE(CUC)DtE(CUC)D 72 nt9.21□□□□□ -0.94
VPS41P38959 tE(CUC)ItE(CUC)I 72 nt9.21□□□□□ -0.94
VPS41P38959 APT2YDR441C 546 nt9.21□□□□□ -0.94
VPS41P38959 LSB5YCL034W 1065 nt9.21□□□□□ -0.94
VPS41P38959 SAC7YDR389W 1965 nt9.21□□□□□ -0.94
VPS41P38959 TRP2YER090W 1524 nt9.21□□□□□ -0.94
VPS41P38959 DUS3YLR401C 2007 nt9.2□□□□□ -0.94
VPS41P38959 MSB4YOL112W 1479 nt9.19□□□□□ -0.94
VPS41P38959 ERG13YML126C 1476 nt9.18□□□□□ -0.94
VPS41P38959 HXT11YOL156W 1704 nt9.17□□□□□ -0.94
VPS41P38959 YDR467CYDR467C 327 nt9.17□□□□□ -0.94
VPS41P38959 NUC1YJL208C 990 nt9.17□□□□□ -0.94
VPS41P38959 EAF3YPR023C 1206 nt9.17□□□□□ -0.94
VPS41P38959 YDR510C-AYDR510C-A 117 nt9.16□□□□□ -0.94
VPS41P38959 ORT1YOR130C 879 nt9.16□□□□□ -0.94
VPS41P38959 SAM3YPL274W 1764 nt9.16□□□□□ -0.94
VPS41P38959 THI6YPL214C 1623 nt9.16□□□□□ -0.94
VPS41P38959 TSC10YBR265W 963 nt9.15□□□□□ -0.94
VPS41P38959 GND1YHR183W 1470 nt9.15□□□□□ -0.95
VPS41P38959 snR4snR4 186 nt9.14□□□□□ -0.95
VPS41P38959 YMR265CYMR265C 1386 nt9.12□□□□□ -0.95
VPS41P38959 LPD1YFL018C 1500 nt9.12□□□□□ -0.95
VPS41P38959 LOT5YKL183W 921 nt9.12□□□□□ -0.95
VPS41P38959 FRA1YLL029W 2250 nt9.12□□□□□ -0.95
VPS41P38959 SRM1YGL097W 1449 nt9.12□□□□□ -0.95
VPS41P38959 POP2YNR052C 1302 nt9.11□□□□□ -0.95
VPS41P38959 OYE2YHR179W 1203 nt9.1□□□□□ -0.95
VPS41P38959 ELO1YJL196C 933 nt9.1□□□□□ -0.95
VPS41P38959 PRY1YJL079C 900 nt9.09□□□□□ -0.95
VPS41P38959 DDI1YER143W 1287 nt9.08□□□□□ -0.96
VPS41P38959 EMC3YKL207W 762 nt9.07□□□□□ -0.96
VPS41P38959 HAP5YOR358W 729 nt9.06□□□□□ -0.96
VPS41P38959 SUV3YPL029W 2214 nt9.06□□□□□ -0.96
VPS41P38959 FTH1YBR207W 1398 nt9.06□□□□□ -0.96
VPS41P38959 TPS1YBR126C 1488 nt9.06□□□□□ -0.96
VPS41P38959 ADE16YLR028C 1776 nt9.06□□□□□ -0.96
VPS41P38959 YGR012WYGR012W 1182 nt9.05□□□□□ -0.96
VPS41P38959 SDH5YOL071W 489 nt9.05□□□□□ -0.96
VPS41P38959 RPT5YOR117W 1305 nt9.05□□□□□ -0.96
VPS41P38959 AAT1YKL106W 1356 nt9.03□□□□□ -0.96
VPS41P38959 GPM1YKL152C 744 nt9.02□□□□□ -0.97
VPS41P38959 YBL095WYBL095W 813 nt9.02□□□□□ -0.97
VPS41P38959 TMA23YMR269W 636 nt9□□□□□ -0.97
VPS41P38959 YNR064CYNR064C 873 nt9□□□□□ -0.97
VPS41P38959 RRT8YOL048C 1029 nt9□□□□□ -0.97
VPS41P38959 GNP1YDR508C 1992 nt9□□□□□ -0.97
VPS41P38959 HXT12YIL170W 1374 nt8.99□□□□□ -0.97
VPS41P38959 RPN14YGL004C 1254 nt8.99□□□□□ -0.97
VPS41P38959 YJL118WYJL118W 660 nt8.99□□□□□ -0.97
VPS41P38959 YLR072WYLR072W 2082 nt8.99□□□□□ -0.97
VPS41P38959 SMM1YNR015W 1155 nt8.98□□□□□ -0.97
VPS41P38959 YMR210WYMR210W 1350 nt8.98□□□□□ -0.97
VPS41P38959 PFS2YNL317W 1398 nt8.98□□□□□ -0.97
VPS41P38959 CRC1YOR100C 984 nt8.97□□□□□ -0.97
VPS41P38959 KEL3YPL263C 1956 nt8.96□□□□□ -0.98
VPS41P38959 GLR1YPL091W 1452 nt8.96□□□□□ -0.98
VPS41P38959 YMC2YBR104W 990 nt8.95□□□□□ -0.98
VPS41P38959 SFL1YOR140W 2301 nt8.95□□□□□ -0.98
VPS41P38959 RAD23YEL037C 1197 nt8.94□□□□□ -0.98
VPS41P38959 HSV2YGR223C 1347 nt8.94□□□□□ -0.98
VPS41P38959 IMO32YGR031W 1029 nt8.93□□□□□ -0.98
VPS41P38959 YNL190WYNL190W 615 nt8.93□□□□□ -0.98
VPS41P38959 YPL222C-AYPL222C-A 246 nt8.93□□□□□ -0.98
VPS41P38959 DIA4YHR011W 1341 nt8.93□□□□□ -0.98
VPS41P38959 THI3YDL080C 1830 nt8.93□□□□□ -0.98
VPS41P38959 MET30YIL046W 1923 nt8.92□□□□□ -0.98
VPS41P38959 TPN1YGL186C 1740 nt8.92□□□□□ -0.98
VPS41P38959 ALR1YOL130W 2580 nt8.92□□□□□ -0.98
VPS41P38959 YJR114WYJR114W 393 nt8.91□□□□□ -0.98
VPS41P38959 YJL055WYJL055W 738 nt8.9□□□□□ -0.98
VPS41P38959 OPI3YJR073C 621 nt8.9□□□□□ -0.98
VPS41P38959 YLR111WYLR111W 333 nt8.9□□□□□ -0.98
VPS41P38959 MDH2YOL126C 1134 nt8.89□□□□□ -0.99
VPS41P38959 LEA1YPL213W 717 nt8.89□□□□□ -0.99
VPS41P38959 KGD2YDR148C 1392 nt8.88□□□□□ -0.99
VPS41P38959 ADE8YDR408C 645 nt8.88□□□□□ -0.99
VPS41P38959 MET1YKR069W 1782 nt8.87□□□□□ -0.99
VPS41P38959 LAS17YOR181W 1902 nt8.87□□□□□ -0.99
Retrieved 100 of 7,029 protein–RNA pairs in 59.6 ms