Protein–RNA interactions for Protein: P38319

TDP1, Tyrosyl-DNA phosphodiesterase 1, yeastyeast

Predictions only

Length 544 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
TDP1P38319 YJL118WYJL118W 660 nt8.6□□□□□ -1.03
TDP1P38319 YLR437C-AYLR437C-A 228 nt8.6□□□□□ -1.03
TDP1P38319 Q0010Q0010 387 nt8.6□□□□□ -1.03
TDP1P38319 LOT5YKL183W 921 nt8.58□□□□□ -1.04
TDP1P38319 TPS1YBR126C 1488 nt8.57□□□□□ -1.04
TDP1P38319 HXT12YIL170W 1374 nt8.57□□□□□ -1.04
TDP1P38319 SAC7YDR389W 1965 nt8.57□□□□□ -1.04
TDP1P38319 ALD5YER073W 1563 nt8.56□□□□□ -1.04
TDP1P38319 TIM44YIL022W 1296 nt8.56□□□□□ -1.04
TDP1P38319 YJL055WYJL055W 738 nt8.56□□□□□ -1.04
TDP1P38319 ERG13YML126C 1476 nt8.56□□□□□ -1.04
TDP1P38319 VMA11YPL234C 495 nt8.55□□□□□ -1.04
TDP1P38319 LSM5YER146W 282 nt8.54□□□□□ -1.04
TDP1P38319 YJR154WYJR154W 1041 nt8.54□□□□□ -1.04
TDP1P38319 YMR262WYMR262W 942 nt8.54□□□□□ -1.04
TDP1P38319 DDI1YER143W 1287 nt8.53□□□□□ -1.04
TDP1P38319 TMA23YMR269W 636 nt8.53□□□□□ -1.04
TDP1P38319 YRF1-2YER190W 5046 nt8.53□□□□□ -1.04
TDP1P38319 LSB3YFR024C-A 1380 nt8.52□□□□□ -1.05
TDP1P38319 GAL3YDR009W 1563 nt8.52□□□□□ -1.05
TDP1P38319 DPL1YDR294C 1770 nt8.51□□□□□ -1.05
TDP1P38319 AGP3YFL055W 1677 nt8.51□□□□□ -1.05
TDP1P38319 VRG4YGL225W 1014 nt8.51□□□□□ -1.05
TDP1P38319 RPC31YNL151C 756 nt8.51□□□□□ -1.05
TDP1P38319 RIM2YBR192W 1134 nt8.51□□□□□ -1.05
TDP1P38319 RRT8YOL048C 1029 nt8.5□□□□□ -1.05
TDP1P38319 RAD51YER095W 1203 nt8.49□□□□□ -1.05
TDP1P38319 MTO1YGL236C 2010 nt8.49□□□□□ -1.05
TDP1P38319 KRR1YCL059C 951 nt8.48□□□□□ -1.05
TDP1P38319 SNX3YOR357C 489 nt8.48□□□□□ -1.05
TDP1P38319 TIP1YBR067C 633 nt8.48□□□□□ -1.05
TDP1P38319 MAS1YLR163C 1389 nt8.47□□□□□ -1.05
TDP1P38319 IMO32YGR031W 1029 nt8.46□□□□□ -1.06
TDP1P38319 RIB7YBR153W 735 nt8.46□□□□□ -1.06
TDP1P38319 MET8YBR213W 825 nt8.46□□□□□ -1.06
TDP1P38319 RIB2YOL066C 1776 nt8.44□□□□□ -1.06
TDP1P38319 NBA1YOL070C 1506 nt8.43□□□□□ -1.06
TDP1P38319 CSM2YIL132C 642 nt8.42□□□□□ -1.06
TDP1P38319 YMR265CYMR265C 1386 nt8.42□□□□□ -1.06
TDP1P38319 LEU4YNL104C 1860 nt8.42□□□□□ -1.06
TDP1P38319 ELO1YJL196C 933 nt8.41□□□□□ -1.06
TDP1P38319 SUV3YPL029W 2214 nt8.41□□□□□ -1.06
TDP1P38319 YNR064CYNR064C 873 nt8.4□□□□□ -1.06
TDP1P38319 YPI1YFR003C 468 nt8.39□□□□□ -1.07
TDP1P38319 YJR114WYJR114W 393 nt8.38□□□□□ -1.07
TDP1P38319 HAP5YOR358W 729 nt8.38□□□□□ -1.07
TDP1P38319 INH1YDL181W 258 nt8.37□□□□□ -1.07
TDP1P38319 ADE8YDR408C 645 nt8.37□□□□□ -1.07
TDP1P38319 OPI3YJR073C 621 nt8.37□□□□□ -1.07
TDP1P38319 STE4YOR212W 1272 nt8.37□□□□□ -1.07
TDP1P38319 DAK2YFL053W 1776 nt8.37□□□□□ -1.07
TDP1P38319 YFR036W-AYFR036W-A 651 nt8.36□□□□□ -1.07
TDP1P38319 PCP1YGR101W 1041 nt8.36□□□□□ -1.07
TDP1P38319 YLR349WYLR349W 507 nt8.36□□□□□ -1.07
TDP1P38319 YNR029CYNR029C 1290 nt8.36□□□□□ -1.07
TDP1P38319 FET5YFL041W 1869 nt8.35□□□□□ -1.07
TDP1P38319 KEL3YPL263C 1956 nt8.35□□□□□ -1.07
TDP1P38319 SFL1YOR140W 2301 nt8.35□□□□□ -1.07
TDP1P38319 FUN14YAL008W 597 nt8.34□□□□□ -1.07
TDP1P38319 YJL195CYJL195C 702 nt8.34□□□□□ -1.07
TDP1P38319 NPP2YEL016C 1482 nt8.33□□□□□ -1.08
TDP1P38319 tE(CUC)DtE(CUC)D 72 nt8.33□□□□□ -1.08
TDP1P38319 tE(CUC)ItE(CUC)I 72 nt8.33□□□□□ -1.08
TDP1P38319 ADH1YOL086C 1047 nt8.33□□□□□ -1.08
TDP1P38319 RPN14YGL004C 1254 nt8.32□□□□□ -1.08
TDP1P38319 SNZ1YMR096W 894 nt8.32□□□□□ -1.08
TDP1P38319 MDL2YPL270W 2322 nt8.31□□□□□ -1.08
TDP1P38319 CRC1YOR100C 984 nt8.31□□□□□ -1.08
TDP1P38319 HEM14YER014W 1620 nt8.31□□□□□ -1.08
TDP1P38319 MCM5YLR274W 2328 nt8.3□□□□□ -1.08
TDP1P38319 TVP23YDR084C 600 nt8.3□□□□□ -1.08
TDP1P38319 YDR467CYDR467C 327 nt8.3□□□□□ -1.08
TDP1P38319 YPR126CYPR126C 309 nt8.3□□□□□ -1.08
TDP1P38319 ADH7YCR105W 1086 nt8.29□□□□□ -1.08
TDP1P38319 SWT21YNL187W 1074 nt8.29□□□□□ -1.08
TDP1P38319 YOR072WYOR072W 315 nt8.29□□□□□ -1.08
TDP1P38319 TPN1YGL186C 1740 nt8.29□□□□□ -1.08
TDP1P38319 PAU15YIR041W 375 nt8.27□□□□□ -1.09
TDP1P38319 MET1YKR069W 1782 nt8.27□□□□□ -1.09
TDP1P38319 RSC4YKR008W 1878 nt8.26□□□□□ -1.09
TDP1P38319 FRA1YLL029W 2250 nt8.26□□□□□ -1.09
TDP1P38319 tD(GUC)BtD(GUC)B 72 nt8.24□□□□□ -1.09
TDP1P38319 tD(GUC)DtD(GUC)D 72 nt8.24□□□□□ -1.09
TDP1P38319 tD(GUC)G1tD(GUC)G1 72 nt8.24□□□□□ -1.09
TDP1P38319 tD(GUC)G2tD(GUC)G2 72 nt8.24□□□□□ -1.09
TDP1P38319 tD(GUC)I1tD(GUC)I1 72 nt8.24□□□□□ -1.09
TDP1P38319 tD(GUC)I2tD(GUC)I2 72 nt8.24□□□□□ -1.09
TDP1P38319 tD(GUC)J1tD(GUC)J1 72 nt8.24□□□□□ -1.09
TDP1P38319 tD(GUC)J2tD(GUC)J2 72 nt8.24□□□□□ -1.09
TDP1P38319 tD(GUC)J3tD(GUC)J3 72 nt8.24□□□□□ -1.09
TDP1P38319 tD(GUC)J4tD(GUC)J4 72 nt8.24□□□□□ -1.09
TDP1P38319 tD(GUC)KtD(GUC)K 72 nt8.24□□□□□ -1.09
TDP1P38319 tD(GUC)L1tD(GUC)L1 72 nt8.24□□□□□ -1.09
TDP1P38319 tD(GUC)L2tD(GUC)L2 72 nt8.24□□□□□ -1.09
TDP1P38319 tD(GUC)MtD(GUC)M 72 nt8.24□□□□□ -1.09
TDP1P38319 tD(GUC)OtD(GUC)O 72 nt8.24□□□□□ -1.09
TDP1P38319 SPS100YHR139C 981 nt8.24□□□□□ -1.09
TDP1P38319 snR31snR31 225 nt8.24□□□□□ -1.09
TDP1P38319 TOM71YHR117W 1920 nt8.24□□□□□ -1.09
TDP1P38319 ALR1YOL130W 2580 nt8.24□□□□□ -1.09
Retrieved 100 of 7,029 protein–RNA pairs in 11.4 ms