Protein–RNA interactions for Protein: P35813

PPM1A, Protein phosphatase 1A, humanhuman

Predictions only

Length 382 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PPM1AP35813 SSBP3-204ENST00000371320 2077 ntAPPRIS P3 TSL 1 (best) BASIC28.4■■■□□ 2.14
PPM1AP35813 C16orf95-205ENST00000567970 1031 ntAPPRIS ALT2 TSL 5 BASIC28.39■■■□□ 2.14
PPM1AP35813 HSD17B1P1-201ENST00000590052 955 ntBASIC28.39■■■□□ 2.14
PPM1AP35813 H2AFV-204ENST00000350771 687 ntTSL 2 BASIC28.38■■■□□ 2.13
PPM1AP35813 TRNP1-201ENST00000522111 1958 ntAPPRIS P2 TSL 1 (best) BASIC28.37■■■□□ 2.13
PPM1AP35813 EBPL-201ENST00000242827 914 ntAPPRIS P1 TSL 1 (best) BASIC28.36■■■□□ 2.13
PPM1AP35813 BATF3-201ENST00000243440 980 ntAPPRIS P1 TSL 1 (best) BASIC28.36■■■□□ 2.13
PPM1AP35813 ING2-201ENST00000302327 1189 ntAPPRIS P1 TSL 1 (best) BASIC28.36■■■□□ 2.13
PPM1AP35813 DUX4L13-201ENST00000554103 1267 ntBASIC28.36■■■□□ 2.13
PPM1AP35813 DUX4L15-201ENST00000611059 1267 ntBASIC28.36■■■□□ 2.13
PPM1AP35813 DUX4L23-201ENST00000615195 1269 ntBASIC28.36■■■□□ 2.13
PPM1AP35813 DUX4L24-201ENST00000617576 1269 ntBASIC28.36■■■□□ 2.13
PPM1AP35813 DUX4L22-201ENST00000618238 1269 ntBASIC28.36■■■□□ 2.13
PPM1AP35813 DUX4L20-201ENST00000619712 1269 ntBASIC28.36■■■□□ 2.13
PPM1AP35813 DUX4L21-201ENST00000622058 1269 ntBASIC28.36■■■□□ 2.13
PPM1AP35813 DUX4L10-201ENST00000622460 1267 ntBASIC28.36■■■□□ 2.13
PPM1AP35813 DUX4L25-201ENST00000624915 1269 ntBASIC28.36■■■□□ 2.13
PPM1AP35813 NPTXR-202ENST00000640136 1503 ntAPPRIS P2 TSL 1 (best) BASIC28.35■■■□□ 2.13
PPM1AP35813 VEGFA-208ENST00000417285 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC28.35■■■□□ 2.13
PPM1AP35813 MYLIP-202ENST00000356840 1666 ntAPPRIS P1 TSL 1 (best) BASIC28.33■■■□□ 2.13
PPM1AP35813 CCM2-201ENST00000258781 1894 ntAPPRIS P3 TSL 1 (best) BASIC28.33■■■□□ 2.13
PPM1AP35813 CNIH2-203ENST00000528852 1524 ntAPPRIS ALT1 TSL 1 (best) BASIC28.33■■■□□ 2.13
PPM1AP35813 ARL8A-204ENST00000614750 1727 ntTSL 3 BASIC28.32■■■□□ 2.12
PPM1AP35813 RANBP1-202ENST00000402752 1132 ntAPPRIS ALT1 TSL 1 (best) BASIC28.32■■■□□ 2.12
PPM1AP35813 RRAD-202ENST00000420652 1476 ntAPPRIS P1 TSL 1 (best) BASIC28.32■■■□□ 2.12
PPM1AP35813 PLEKHG6-206ENST00000536531 1683 ntTSL 1 (best) BASIC28.32■■■□□ 2.12
PPM1AP35813 NIT1-201ENST00000368007 1749 ntTSL 2 BASIC28.32■■■□□ 2.12
PPM1AP35813 STARD10-220ENST00000545082 1085 ntTSL 3 BASIC28.31■■■□□ 2.12
PPM1AP35813 C11orf95-204ENST00000546282 390 ntTSL 3 BASIC28.31■■■□□ 2.12
PPM1AP35813 FTCD-202ENST00000397743 1834 ntTSL 1 (best) BASIC28.29■■■□□ 2.12
PPM1AP35813 RASSF7-202ENST00000397583 1928 ntAPPRIS P3 TSL 1 (best) BASIC28.29■■■□□ 2.12
PPM1AP35813 NOG-201ENST00000332822 1892 ntAPPRIS P1 BASIC28.27■■■□□ 2.12
PPM1AP35813 CAAP1-205ENST00000520187 773 ntTSL 5 BASIC28.27■■■□□ 2.12
PPM1AP35813 GLRB-203ENST00000509282 1757 ntAPPRIS P1 TSL 1 (best) BASIC28.27■■■□□ 2.12
PPM1AP35813 ABHD17AP3-201ENST00000503096 1137 ntBASIC28.26■■■□□ 2.11
PPM1AP35813 RHOC-202ENST00000339083 1418 ntAPPRIS P1 TSL 1 (best) BASIC28.26■■■□□ 2.11
PPM1AP35813 HES6-205ENST00000409356 528 ntTSL 2 BASIC28.25■■■□□ 2.11
PPM1AP35813 BRD4-212ENST00000630599 726 ntTSL 2 BASIC28.25■■■□□ 2.11
PPM1AP35813 DTNBP1-212ENST00000622898 1305 ntTSL 1 (best) BASIC28.24■■■□□ 2.11
PPM1AP35813 AP000911.3-201ENST00000526377 1130 ntTSL 3 BASIC28.24■■■□□ 2.11
PPM1AP35813 METRNL-202ENST00000570778 967 ntTSL 5 BASIC28.24■■■□□ 2.11
PPM1AP35813 CHML-204ENST00000638121 920 ntTSL 2 BASIC28.24■■■□□ 2.11
PPM1AP35813 MSRB2-201ENST00000376510 1803 ntAPPRIS P1 TSL 1 (best) BASIC28.24■■■□□ 2.11
PPM1AP35813 GLRX5-201ENST00000331334 1564 ntAPPRIS P1 TSL 1 (best) BASIC28.24■■■□□ 2.11
PPM1AP35813 U2AF1-201ENST00000291552 962 ntAPPRIS P3 TSL 1 (best) BASIC28.23■■■□□ 2.11
PPM1AP35813 U2AF1L5-202ENST00000619610 813 ntAPPRIS ALT2 TSL 1 (best) BASIC28.23■■■□□ 2.11
PPM1AP35813 JMJD8-216ENST00000609261 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC28.22■■■□□ 2.11
PPM1AP35813 AP002884.3-203ENST00000419895 1711 ntTSL 2 BASIC28.22■■■□□ 2.11
PPM1AP35813 AP000251.1-201ENST00000433071 822 ntTSL 1 (best) BASIC28.22■■■□□ 2.11
PPM1AP35813 EIF5A-208ENST00000573542 1089 ntAPPRIS P1 TSL 2 BASIC28.22■■■□□ 2.11
PPM1AP35813 OLFM2-201ENST00000264833 2019 ntAPPRIS P1 TSL 1 (best) BASIC28.21■■■□□ 2.11
PPM1AP35813 ARL6IP4-211ENST00000454885 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC28.2■■■□□ 2.11
PPM1AP35813 XKR6-201ENST00000297303 1550 ntTSL 1 (best) BASIC28.2■■■□□ 2.11
PPM1AP35813 RBPMS-209ENST00000520161 842 ntTSL 2 BASIC28.2■■■□□ 2.1
PPM1AP35813 AVEN-201ENST00000306730 1605 ntAPPRIS P1 TSL 1 (best) BASIC28.2■■■□□ 2.1
PPM1AP35813 MTCP1-202ENST00000369476 2274 ntAPPRIS P1 TSL 3 BASIC28.19■■■□□ 2.1
PPM1AP35813 PPP4R4-202ENST00000328839 876 ntTSL 1 (best) BASIC28.19■■■□□ 2.1
PPM1AP35813 ABHD12-201ENST00000339157 2117 ntAPPRIS P1 TSL 2 BASIC28.18■■■□□ 2.1
PPM1AP35813 NOP53-201ENST00000246802 1528 ntAPPRIS P1 TSL 1 (best) BASIC28.18■■■□□ 2.1
PPM1AP35813 BCL7B-202ENST00000411832 1458 ntTSL 2 BASIC28.16■■■□□ 2.1
PPM1AP35813 WHRN-203ENST00000374057 1718 ntTSL 2 BASIC28.15■■■□□ 2.1
PPM1AP35813 GUSB-202ENST00000421103 1742 ntTSL 2 BASIC28.15■■■□□ 2.1
PPM1AP35813 TPRA1-201ENST00000296210 1725 ntTSL 1 (best) BASIC28.14■■■□□ 2.1
PPM1AP35813 BCL7B-201ENST00000223368 1975 ntAPPRIS P1 TSL 1 (best) BASIC28.13■■■□□ 2.09
PPM1AP35813 HES7-202ENST00000541682 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC28.13■■■□□ 2.09
PPM1AP35813 RUNX2-203ENST00000371436 1588 ntAPPRIS ALT2 TSL 5 BASIC28.13■■■□□ 2.09
PPM1AP35813 MAZ-208ENST00000563402 1461 ntTSL 5 BASIC28.13■■■□□ 2.09
PPM1AP35813 MAZ-210ENST00000566906 1455 ntTSL 5 BASIC28.13■■■□□ 2.09
PPM1AP35813 C14orf80-202ENST00000334656 1358 ntAPPRIS ALT2 TSL 2 BASIC28.12■■■□□ 2.09
PPM1AP35813 LINC02323-201ENST00000559946 1603 ntTSL 3 BASIC28.11■■■□□ 2.09
PPM1AP35813 MRPL51-201ENST00000229238 1234 ntAPPRIS P1 TSL 1 (best) BASIC28.11■■■□□ 2.09
PPM1AP35813 CTXN1-201ENST00000318978 1274 ntAPPRIS P1 TSL 1 (best) BASIC28.11■■■□□ 2.09
PPM1AP35813 SIAH1-203ENST00000394725 2147 ntAPPRIS P3 TSL 1 (best) BASIC28.11■■■□□ 2.09
PPM1AP35813 AC231981.1-201ENST00000450917 974 ntTSL 3 BASIC28.11■■■□□ 2.09
PPM1AP35813 TCEA2-204ENST00000395053 1733 ntTSL 1 (best) BASIC28.11■■■□□ 2.09
PPM1AP35813 ZDHHC16-201ENST00000345745 1519 ntTSL 1 (best) BASIC28.11■■■□□ 2.09
PPM1AP35813 TMEM251-202ENST00000415050 1303 ntTSL 2 BASIC28.11■■■□□ 2.09
PPM1AP35813 FAM189B-210ENST00000621094 1335 ntTSL 1 (best) BASIC28.11■■■□□ 2.09
PPM1AP35813 CRNDE-206ENST00000559432 587 ntTSL 3 BASIC28.1■■■□□ 2.09
PPM1AP35813 UBALD1-203ENST00000587649 707 ntTSL 3 BASIC28.1■■■□□ 2.09
PPM1AP35813 PTPRF-216ENST00000617451 1129 ntTSL 5 BASIC28.1■■■□□ 2.09
PPM1AP35813 MSX1-201ENST00000382723 1939 ntAPPRIS P1 TSL 1 (best) BASIC28.1■■■□□ 2.09
PPM1AP35813 MLST8-203ENST00000397124 1691 ntAPPRIS P3 TSL 5 BASIC28.1■■■□□ 2.09
PPM1AP35813 SMDT1-201ENST00000331479 1567 ntAPPRIS P1 TSL 1 (best) BASIC28.09■■■□□ 2.09
PPM1AP35813 AL161658.1-201ENST00000623641 1967 ntBASIC28.09■■■□□ 2.09
PPM1AP35813 PIGX-201ENST00000296333 953 ntAPPRIS ALT2 TSL 2 BASIC28.08■■■□□ 2.09
PPM1AP35813 VEGFA-202ENST00000324450 954 ntTSL 1 (best) BASIC28.08■■■□□ 2.09
PPM1AP35813 VEGFA-203ENST00000372055 1286 ntTSL 1 (best) BASIC28.08■■■□□ 2.09
PPM1AP35813 VEGFA-213ENST00000482630 1146 ntTSL 1 (best) BASIC28.08■■■□□ 2.09
PPM1AP35813 VEGFA-227ENST00000615393 984 ntTSL 1 (best) BASIC28.08■■■□□ 2.09
PPM1AP35813 VEGFA-228ENST00000617771 1116 ntTSL 1 (best) BASIC28.08■■■□□ 2.09
PPM1AP35813 VEGFA-229ENST00000621747 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC28.08■■■□□ 2.09
PPM1AP35813 VEGFA-230ENST00000640482 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC28.08■■■□□ 2.09
PPM1AP35813 VEGFA-232ENST00000640653 1170 ntAPPRIS ALT2 TSL 1 (best) BASIC28.08■■■□□ 2.09
PPM1AP35813 AC009041.3-201ENST00000564390 879 ntTSL 5 BASIC28.07■■■□□ 2.08
PPM1AP35813 LINC00273-201ENST00000539813 1452 ntBASIC28.07■■■□□ 2.08
PPM1AP35813 AC092902.2-221ENST00000628476 965 ntTSL 5 BASIC28.06■■■□□ 2.08
PPM1AP35813 ATP8B2-201ENST00000368487 1523 ntTSL 1 (best) BASIC28.05■■■□□ 2.08
PPM1AP35813 NME2-205ENST00000512737 826 ntAPPRIS P1 TSL 1 (best) BASIC28.05■■■□□ 2.08
PPM1AP35813 PPP3CC-204ENST00000518852 1598 ntTSL 2 BASIC28.05■■■□□ 2.08
Retrieved 100 of 98,524 protein–RNA pairs in 10.7 ms