Protein–RNA interactions for Protein: P18898

CDC43, Geranylgeranyl transferase type-1 subunit beta, yeastyeast

Predictions only

Length 376 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
CDC43P18898 TOM6YOR045W 186 nt6.73□□□□□ -1.33
CDC43P18898 SED1YDR077W 1017 nt6.72□□□□□ -1.33
CDC43P18898 YDR509WYDR509W 348 nt6.72□□□□□ -1.33
CDC43P18898 PIC2YER053C 903 nt6.72□□□□□ -1.33
CDC43P18898 YJL211CYJL211C 444 nt6.72□□□□□ -1.33
CDC43P18898 YMR147WYMR147W 672 nt6.72□□□□□ -1.33
CDC43P18898 NAT5YOR253W 531 nt6.72□□□□□ -1.33
CDC43P18898 YDR306CYDR306C 1437 nt6.72□□□□□ -1.33
CDC43P18898 MET30YIL046W 1923 nt6.72□□□□□ -1.33
CDC43P18898 YLR173WYLR173W 1827 nt6.71□□□□□ -1.33
CDC43P18898 YDR094WYDR094W 336 nt6.71□□□□□ -1.34
CDC43P18898 YHL019W-AYHL019W-A 594 nt6.71□□□□□ -1.34
CDC43P18898 PMA2YPL036W 2844 nt6.71□□□□□ -1.34
CDC43P18898 YFR018CYFR018C 1092 nt6.7□□□□□ -1.34
CDC43P18898 YGL118CYGL118C 438 nt6.69□□□□□ -1.34
CDC43P18898 PAU7YAR020C 168 nt6.69□□□□□ -1.34
CDC43P18898 PET8YNL003C 855 nt6.69□□□□□ -1.34
CDC43P18898 MOD5YOR274W 1287 nt6.69□□□□□ -1.34
CDC43P18898 FMS1YMR020W 1527 nt6.69□□□□□ -1.34
CDC43P18898 POP2YNR052C 1302 nt6.69□□□□□ -1.34
CDC43P18898 HIP1YGR191W 1812 nt6.69□□□□□ -1.34
CDC43P18898 APM1YPL259C 1428 nt6.68□□□□□ -1.34
CDC43P18898 OCA1YNL099C 717 nt6.68□□□□□ -1.34
CDC43P18898 LSR1LSR1 1175 nt6.68□□□□□ -1.34
CDC43P18898 GCD11YER025W 1584 nt6.68□□□□□ -1.34
CDC43P18898 MTG2YHR168W 1557 nt6.68□□□□□ -1.34
CDC43P18898 YRF1-3YGR296W 5580 nt6.68□□□□□ -1.34
CDC43P18898 YRF1-6YNL339C 5580 nt6.68□□□□□ -1.34
CDC43P18898 YRF1-7YPL283C 5580 nt6.68□□□□□ -1.34
CDC43P18898 YEL074WYEL074W 339 nt6.67□□□□□ -1.34
CDC43P18898 MET28YIR017C 564 nt6.67□□□□□ -1.34
CDC43P18898 RMA1YKL132C 1293 nt6.67□□□□□ -1.34
CDC43P18898 YMR262WYMR262W 942 nt6.67□□□□□ -1.34
CDC43P18898 PZF1YPR186C 1290 nt6.67□□□□□ -1.34
CDC43P18898 ECM10YEL030W 1935 nt6.67□□□□□ -1.34
CDC43P18898 YER190C-AYER190C-A 576 nt6.66□□□□□ -1.34
CDC43P18898 YGR296C-AYGR296C-A 576 nt6.66□□□□□ -1.34
CDC43P18898 YML133W-AYML133W-A 576 nt6.66□□□□□ -1.34
CDC43P18898 YNL339W-AYNL339W-A 576 nt6.66□□□□□ -1.34
CDC43P18898 SPP2YOR148C 558 nt6.66□□□□□ -1.34
CDC43P18898 AIM41YOR215C 558 nt6.66□□□□□ -1.34
CDC43P18898 OYE3YPL171C 1203 nt6.66□□□□□ -1.34
CDC43P18898 YPL283W-AYPL283W-A 576 nt6.66□□□□□ -1.34
CDC43P18898 LSM12YHR121W 564 nt6.65□□□□□ -1.34
CDC43P18898 RTG2YGL252C 1767 nt6.64□□□□□ -1.35
CDC43P18898 YDL086WYDL086W 822 nt6.64□□□□□ -1.35
CDC43P18898 LSM5YER146W 282 nt6.64□□□□□ -1.35
CDC43P18898 SAM1YLR180W 1149 nt6.64□□□□□ -1.35
CDC43P18898 YIL177CYIL177C 5277 nt6.64□□□□□ -1.35
CDC43P18898 ICE2YIL090W 1476 nt6.64□□□□□ -1.35
CDC43P18898 ATG22YCL038C 1587 nt6.64□□□□□ -1.35
CDC43P18898 RSM23YGL129C 1353 nt6.63□□□□□ -1.35
CDC43P18898 COX16YJL003W 357 nt6.63□□□□□ -1.35
CDC43P18898 PEX2YJL210W 816 nt6.63□□□□□ -1.35
CDC43P18898 ALP1YNL270C 1722 nt6.63□□□□□ -1.35
CDC43P18898 BRR1YPR057W 1026 nt6.63□□□□□ -1.35
CDC43P18898 PCL10YGL134W 1302 nt6.62□□□□□ -1.35
CDC43P18898 YHP1YDR451C 1062 nt6.62□□□□□ -1.35
CDC43P18898 GET2YER083C 858 nt6.62□□□□□ -1.35
CDC43P18898 FIT3YOR383C 615 nt6.62□□□□□ -1.35
CDC43P18898 RIM2YBR192W 1134 nt6.62□□□□□ -1.35
CDC43P18898 AFG2YLR397C 2343 nt6.62□□□□□ -1.35
CDC43P18898 RPD3YNL330C 1302 nt6.61□□□□□ -1.35
CDC43P18898 TRT2tT(CGU)K 72 nt6.61□□□□□ -1.35
CDC43P18898 MRPL36YBR122C 534 nt6.61□□□□□ -1.35
CDC43P18898 FRT1YOR324C 1809 nt6.61□□□□□ -1.35
CDC43P18898 YPS3YLR121C 1527 nt6.6□□□□□ -1.35
CDC43P18898 VPS62YGR141W 1404 nt6.6□□□□□ -1.35
CDC43P18898 ADE16YLR028C 1776 nt6.6□□□□□ -1.35
CDC43P18898 OXA1YER154W 1209 nt6.6□□□□□ -1.35
CDC43P18898 RRT5YFR032C 870 nt6.6□□□□□ -1.35
CDC43P18898 TIM44YIL022W 1296 nt6.6□□□□□ -1.35
CDC43P18898 ORT1YOR130C 879 nt6.6□□□□□ -1.35
CDC43P18898 YPL251WYPL251W 303 nt6.6□□□□□ -1.35
CDC43P18898 DLD3YEL071W 1491 nt6.6□□□□□ -1.35
CDC43P18898 SIR2YDL042C 1689 nt6.59□□□□□ -1.35
CDC43P18898 MCM5YLR274W 2328 nt6.59□□□□□ -1.35
CDC43P18898 BNA3YJL060W 1335 nt6.59□□□□□ -1.35
CDC43P18898 FLR1YBR008C 1647 nt6.59□□□□□ -1.35
CDC43P18898 TOA2YKL058W 369 nt6.59□□□□□ -1.35
CDC43P18898 DPL1YDR294C 1770 nt6.59□□□□□ -1.35
CDC43P18898 SAM2YDR502C 1155 nt6.58□□□□□ -1.36
CDC43P18898 AIM34YMR003W 597 nt6.58□□□□□ -1.36
CDC43P18898 YBL081WYBL081W 1107 nt6.58□□□□□ -1.36
CDC43P18898 snR4snR4 186 nt6.58□□□□□ -1.36
CDC43P18898 UBA4YHR111W 1323 nt6.57□□□□□ -1.36
CDC43P18898 PHO89YBR296C 1725 nt6.57□□□□□ -1.36
CDC43P18898 MRS3YJL133W 945 nt6.57□□□□□ -1.36
CDC43P18898 MIR1YJR077C 936 nt6.57□□□□□ -1.36
CDC43P18898 HXT11YOL156W 1704 nt6.56□□□□□ -1.36
CDC43P18898 GND2YGR256W 1479 nt6.56□□□□□ -1.36
CDC43P18898 UTH1YKR042W 1098 nt6.56□□□□□ -1.36
CDC43P18898 COQ2YNR041C 1119 nt6.56□□□□□ -1.36
CDC43P18898 AKR2YOR034C 2250 nt6.56□□□□□ -1.36
CDC43P18898 CCR4YAL021C 2514 nt6.55□□□□□ -1.36
CDC43P18898 YCR099CYCR099C 468 nt6.55□□□□□ -1.36
CDC43P18898 RPC31YNL151C 756 nt6.55□□□□□ -1.36
CDC43P18898 SEC61YLR378C 1443 nt6.55□□□□□ -1.36
CDC43P18898 PUS7YOR243C 2031 nt6.55□□□□□ -1.36
CDC43P18898 PFS2YNL317W 1398 nt6.55□□□□□ -1.36
Retrieved 100 of 7,029 protein–RNA pairs in 7.3 ms