Protein–RNA interactions for Protein: P0CX58

TY1A-PR1, Transposon Ty1-PR1 Gag polyprotein, yeastyeast

Predictions only

Length 440 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
TY1A-PR1P0CX58 YHR145CYHR145C 357 nt9.25□□□□□ -0.93
TY1A-PR1P0CX58 YAT1YAR035W 2064 nt9.24□□□□□ -0.93
TY1A-PR1P0CX58 YDL121CYDL121C 450 nt9.24□□□□□ -0.93
TY1A-PR1P0CX58 YLR154C-GYLR154C-G 150 nt9.24□□□□□ -0.93
TY1A-PR1P0CX58 CDA2YLR308W 939 nt9.24□□□□□ -0.93
TY1A-PR1P0CX58 YBL029C-AYBL029C-A 285 nt9.24□□□□□ -0.93
TY1A-PR1P0CX58 YET2YMR040W 483 nt9.24□□□□□ -0.93
TY1A-PR1P0CX58 YER138W-AYER138W-A 105 nt9.23□□□□□ -0.93
TY1A-PR1P0CX58 ARG3YJL088W 1017 nt9.23□□□□□ -0.93
TY1A-PR1P0CX58 FIP1YJR093C 984 nt9.23□□□□□ -0.93
TY1A-PR1P0CX58 YLR118CYLR118C 684 nt9.23□□□□□ -0.93
TY1A-PR1P0CX58 YMR244WYMR244W 1068 nt9.23□□□□□ -0.93
TY1A-PR1P0CX58 YBL107W-AYBL107W-A 105 nt9.23□□□□□ -0.93
TY1A-PR1P0CX58 YJR115WYJR115W 510 nt9.22□□□□□ -0.93
TY1A-PR1P0CX58 YMR144WYMR144W 1029 nt9.22□□□□□ -0.93
TY1A-PR1P0CX58 YDR220CYDR220C 294 nt9.21□□□□□ -0.94
TY1A-PR1P0CX58 OKP1YGR179C 1221 nt9.21□□□□□ -0.94
TY1A-PR1P0CX58 TDH1YJL052W 999 nt9.21□□□□□ -0.94
TY1A-PR1P0CX58 FMT1YBL013W 1206 nt9.21□□□□□ -0.94
TY1A-PR1P0CX58 ESC2YDR363W 1371 nt9.21□□□□□ -0.94
TY1A-PR1P0CX58 SAS4YDR181C 1446 nt9.21□□□□□ -0.94
TY1A-PR1P0CX58 ERV29YGR284C 933 nt9.2□□□□□ -0.94
TY1A-PR1P0CX58 ATP12YJL180C 978 nt9.2□□□□□ -0.94
TY1A-PR1P0CX58 TAP42YMR028W 1101 nt9.2□□□□□ -0.94
TY1A-PR1P0CX58 BAG7YOR134W 1230 nt9.2□□□□□ -0.94
TY1A-PR1P0CX58 MIC10YCL057C-A 294 nt9.2□□□□□ -0.94
TY1A-PR1P0CX58 NMT1YLR195C 1368 nt9.2□□□□□ -0.94
TY1A-PR1P0CX58 YMR209CYMR209C 1374 nt9.2□□□□□ -0.94
TY1A-PR1P0CX58 GCV1YDR019C 1203 nt9.19□□□□□ -0.94
TY1A-PR1P0CX58 TCA17YEL048C 459 nt9.19□□□□□ -0.94
TY1A-PR1P0CX58 CCE1YKL011C 1062 nt9.19□□□□□ -0.94
TY1A-PR1P0CX58 CRR1YLR213C 1269 nt9.19□□□□□ -0.94
TY1A-PR1P0CX58 TAF11YML015C 1041 nt9.19□□□□□ -0.94
TY1A-PR1P0CX58 YMR181CYMR181C 465 nt9.19□□□□□ -0.94
TY1A-PR1P0CX58 KAR1YNL188W 1302 nt9.19□□□□□ -0.94
TY1A-PR1P0CX58 YDR161WYDR161W 1164 nt9.18□□□□□ -0.94
TY1A-PR1P0CX58 FMP52YER004W 696 nt9.18□□□□□ -0.94
TY1A-PR1P0CX58 VHS2YIL135C 1311 nt9.18□□□□□ -0.94
TY1A-PR1P0CX58 CTR3YLR411W 726 nt9.18□□□□□ -0.94
TY1A-PR1P0CX58 YNR048WYNR048W 1182 nt9.18□□□□□ -0.94
TY1A-PR1P0CX58 PPH22YDL188C 1134 nt9.17□□□□□ -0.94
TY1A-PR1P0CX58 BI2Q0110 1272 nt9.17□□□□□ -0.94
TY1A-PR1P0CX58 ERJ5YFR041C 888 nt9.17□□□□□ -0.94
TY1A-PR1P0CX58 YFR045WYFR045W 930 nt9.17□□□□□ -0.94
TY1A-PR1P0CX58 MMS2YGL087C 414 nt9.17□□□□□ -0.94
TY1A-PR1P0CX58 RPN8YOR261C 1017 nt9.17□□□□□ -0.94
TY1A-PR1P0CX58 RAM1YDL090C 1296 nt9.16□□□□□ -0.94
TY1A-PR1P0CX58 SHU1YHL006C 453 nt9.16□□□□□ -0.94
TY1A-PR1P0CX58 ISY1YJR050W 708 nt9.16□□□□□ -0.94
TY1A-PR1P0CX58 GLC8YMR311C 690 nt9.16□□□□□ -0.94
TY1A-PR1P0CX58 COG5YNL051W 1212 nt9.16□□□□□ -0.94
TY1A-PR1P0CX58 DML1YMR211W 1428 nt9.15□□□□□ -0.94
TY1A-PR1P0CX58 YLH47YPR125W 1365 nt9.15□□□□□ -0.94
TY1A-PR1P0CX58 YAP6YDR259C 1152 nt9.15□□□□□ -0.94
TY1A-PR1P0CX58 TVP38YKR088C 1014 nt9.15□□□□□ -0.94
TY1A-PR1P0CX58 ADH2YMR303C 1047 nt9.15□□□□□ -0.94
TY1A-PR1P0CX58 YNL226WYNL226W 411 nt9.15□□□□□ -0.94
TY1A-PR1P0CX58 RTC4YNL254C 1206 nt9.15□□□□□ -0.94
TY1A-PR1P0CX58 PTC4YBR125C 1182 nt9.15□□□□□ -0.94
TY1A-PR1P0CX58 IPI3YNL182C 1668 nt9.15□□□□□ -0.94
TY1A-PR1P0CX58 COG7YGL005C 840 nt9.14□□□□□ -0.95
TY1A-PR1P0CX58 YIP3YNL044W 531 nt9.14□□□□□ -0.95
TY1A-PR1P0CX58 YOL150CYOL150C 312 nt9.14□□□□□ -0.95
TY1A-PR1P0CX58 YBR138CYBR138C 1575 nt9.13□□□□□ -0.95
TY1A-PR1P0CX58 YLR202CYLR202C 327 nt9.13□□□□□ -0.95
TY1A-PR1P0CX58 ERF2YLR246W 1080 nt9.13□□□□□ -0.95
TY1A-PR1P0CX58 YLR407WYLR407W 687 nt9.13□□□□□ -0.95
TY1A-PR1P0CX58 YNL171CYNL171C 369 nt9.13□□□□□ -0.95
TY1A-PR1P0CX58 HEM15YOR176W 1182 nt9.13□□□□□ -0.95
TY1A-PR1P0CX58 YPR027CYPR027C 834 nt9.13□□□□□ -0.95
TY1A-PR1P0CX58 TIF5YPR041W 1218 nt9.13□□□□□ -0.95
TY1A-PR1P0CX58 RAX1YOR301W 1308 nt9.12□□□□□ -0.95
TY1A-PR1P0CX58 snR56snR56 88 nt9.12□□□□□ -0.95
TY1A-PR1P0CX58 snR57snR57 88 nt9.12□□□□□ -0.95
TY1A-PR1P0CX58 RPN9YDR427W 1182 nt9.12□□□□□ -0.95
TY1A-PR1P0CX58 DDI1YER143W 1287 nt9.12□□□□□ -0.95
TY1A-PR1P0CX58 MIR1YJR077C 936 nt9.12□□□□□ -0.95
TY1A-PR1P0CX58 SSU72YNL222W 621 nt9.12□□□□□ -0.95
TY1A-PR1P0CX58 YOL024WYOL024W 519 nt9.12□□□□□ -0.95
TY1A-PR1P0CX58 YBR089WYBR089W 600 nt9.12□□□□□ -0.95
TY1A-PR1P0CX58 HEL2YDR266C 1920 nt9.11□□□□□ -0.95
TY1A-PR1P0CX58 RBG2YGR173W 1107 nt9.11□□□□□ -0.95
TY1A-PR1P0CX58 BUD31YCR063W 474 nt9.1□□□□□ -0.95
TY1A-PR1P0CX58 WSC2YNL283C 1512 nt9.1□□□□□ -0.95
TY1A-PR1P0CX58 RRT6YGL146C 936 nt9.09□□□□□ -0.95
TY1A-PR1P0CX58 IRC24YIR036C 792 nt9.09□□□□□ -0.95
TY1A-PR1P0CX58 AGP1YCL025C 1902 nt9.08□□□□□ -0.96
TY1A-PR1P0CX58 YFL019CYFL019C 354 nt9.08□□□□□ -0.96
TY1A-PR1P0CX58 UFD1YGR048W 1086 nt9.08□□□□□ -0.96
TY1A-PR1P0CX58 ATF2YGR177C 1608 nt9.08□□□□□ -0.96
TY1A-PR1P0CX58 ARO9YHR137W 1542 nt9.07□□□□□ -0.96
TY1A-PR1P0CX58 YCR025CYCR025C 411 nt9.07□□□□□ -0.96
TY1A-PR1P0CX58 YGR259CYGR259C 441 nt9.07□□□□□ -0.96
TY1A-PR1P0CX58 SNF6YHL025W 999 nt9.07□□□□□ -0.96
TY1A-PR1P0CX58 SUI2YJR007W 915 nt9.07□□□□□ -0.96
TY1A-PR1P0CX58 MTG1YMR097C 1104 nt9.07□□□□□ -0.96
TY1A-PR1P0CX58 SNG1YGR197C 1644 nt9.06□□□□□ -0.96
TY1A-PR1P0CX58 HEM12YDR047W 1089 nt9.06□□□□□ -0.96
TY1A-PR1P0CX58 CWC15YDR163W 528 nt9.06□□□□□ -0.96
TY1A-PR1P0CX58 RTN1YDR233C 888 nt9.06□□□□□ -0.96
Retrieved 100 of 7,029 protein–RNA pairs in 13.5 ms