Protein–RNA interactions for Protein: P09630

HOXC6, Homeobox protein Hox-C6, humanhuman

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC6P09630 DUX4L25-201ENST00000624915 1269 ntBASIC30.29■■■□□ 2.44
HOXC6P09630 RASGEF1C-207ENST00000615330 2268 ntTSL 5 BASIC30.28■■■□□ 2.44
HOXC6P09630 U2AF1-201ENST00000291552 962 ntAPPRIS P3 TSL 1 (best) BASIC30.28■■■□□ 2.44
HOXC6P09630 ABHD17AP3-201ENST00000503096 1137 ntBASIC30.28■■■□□ 2.44
HOXC6P09630 U2AF1L5-202ENST00000619610 813 ntAPPRIS ALT2 TSL 1 (best) BASIC30.28■■■□□ 2.44
HOXC6P09630 PCYT2-206ENST00000571105 1628 ntTSL 5 BASIC30.28■■■□□ 2.44
HOXC6P09630 CHPT1-201ENST00000229266 1585 ntAPPRIS P2 TSL 1 (best) BASIC30.28■■■□□ 2.44
HOXC6P09630 C7orf50-202ENST00000397098 2131 ntAPPRIS P2 TSL 1 (best) BASIC30.28■■■□□ 2.44
HOXC6P09630 NOXA1-201ENST00000341349 1678 ntAPPRIS P1 TSL 1 (best) BASIC30.27■■■□□ 2.44
HOXC6P09630 EBPL-201ENST00000242827 914 ntAPPRIS P1 TSL 1 (best) BASIC30.27■■■□□ 2.44
HOXC6P09630 SULT4A1-201ENST00000330884 2468 ntAPPRIS P1 TSL 1 (best) BASIC30.26■■■□□ 2.43
HOXC6P09630 RDX-206ENST00000528900 1814 ntTSL 1 (best) BASIC30.26■■■□□ 2.43
HOXC6P09630 ANGPTL6-204ENST00000592641 1781 ntAPPRIS P1 TSL 1 (best) BASIC30.26■■■□□ 2.43
HOXC6P09630 HNRNPAB-206ENST00000506339 1747 ntAPPRIS ALT2 TSL 5 BASIC30.25■■■□□ 2.43
HOXC6P09630 PIK3R2-208ENST00000617642 1446 ntTSL 5 BASIC30.25■■■□□ 2.43
HOXC6P09630 RANBP1-202ENST00000402752 1132 ntAPPRIS ALT1 TSL 1 (best) BASIC30.25■■■□□ 2.43
HOXC6P09630 RBPMS-209ENST00000520161 842 ntTSL 2 BASIC30.25■■■□□ 2.43
HOXC6P09630 TSPAN11-203ENST00000545802 1649 ntTSL 1 (best) BASIC30.24■■■□□ 2.43
HOXC6P09630 RHOC-202ENST00000339083 1418 ntAPPRIS P1 TSL 1 (best) BASIC30.23■■■□□ 2.43
HOXC6P09630 STARD10-220ENST00000545082 1085 ntTSL 3 BASIC30.22■■■□□ 2.43
HOXC6P09630 RRAD-202ENST00000420652 1476 ntAPPRIS P1 TSL 1 (best) BASIC30.22■■■□□ 2.43
HOXC6P09630 DTNBP1-212ENST00000622898 1305 ntTSL 1 (best) BASIC30.22■■■□□ 2.43
HOXC6P09630 CAAP1-205ENST00000520187 773 ntTSL 5 BASIC30.21■■■□□ 2.43
HOXC6P09630 METRNL-202ENST00000570778 967 ntTSL 5 BASIC30.21■■■□□ 2.43
HOXC6P09630 EI24-212ENST00000615917 1407 ntTSL 2 BASIC30.21■■■□□ 2.43
HOXC6P09630 AC105285.1-201ENST00000500914 2036 ntTSL 1 (best) BASIC30.2■■■□□ 2.43
HOXC6P09630 EIF5A-208ENST00000573542 1089 ntAPPRIS P1 TSL 2 BASIC30.2■■■□□ 2.43
HOXC6P09630 AP000911.3-201ENST00000526377 1130 ntTSL 3 BASIC30.19■■■□□ 2.42
HOXC6P09630 PPP4R4-202ENST00000328839 876 ntTSL 1 (best) BASIC30.18■■■□□ 2.42
HOXC6P09630 C11orf95-204ENST00000546282 390 ntTSL 3 BASIC30.18■■■□□ 2.42
HOXC6P09630 BATF3-201ENST00000243440 980 ntAPPRIS P1 TSL 1 (best) BASIC30.17■■■□□ 2.42
HOXC6P09630 HES6-205ENST00000409356 528 ntTSL 2 BASIC30.17■■■□□ 2.42
HOXC6P09630 PTPRF-216ENST00000617451 1129 ntTSL 5 BASIC30.17■■■□□ 2.42
HOXC6P09630 BCL7B-202ENST00000411832 1458 ntTSL 2 BASIC30.16■■■□□ 2.42
HOXC6P09630 PLEKHG6-206ENST00000536531 1683 ntTSL 1 (best) BASIC30.15■■■□□ 2.42
HOXC6P09630 AC120057.4-201ENST00000624722 1615 ntBASIC30.14■■■□□ 2.41
HOXC6P09630 MRPL51-201ENST00000229238 1234 ntAPPRIS P1 TSL 1 (best) BASIC30.13■■■□□ 2.41
HOXC6P09630 CHML-204ENST00000638121 920 ntTSL 2 BASIC30.13■■■□□ 2.41
HOXC6P09630 ARL6IP4-211ENST00000454885 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC30.13■■■□□ 2.41
HOXC6P09630 ZBTB12-201ENST00000375527 1875 ntAPPRIS P1 TSL 1 (best) BASIC30.12■■■□□ 2.41
HOXC6P09630 NPTXR-202ENST00000640136 1503 ntAPPRIS P2 TSL 1 (best) BASIC30.12■■■□□ 2.41
HOXC6P09630 MYLIP-202ENST00000356840 1666 ntAPPRIS P1 TSL 1 (best) BASIC30.11■■■□□ 2.41
HOXC6P09630 AP000251.1-201ENST00000433071 822 ntTSL 1 (best) BASIC30.1■■■□□ 2.41
HOXC6P09630 UBALD1-203ENST00000587649 707 ntTSL 3 BASIC30.1■■■□□ 2.41
HOXC6P09630 AP002884.3-203ENST00000419895 1711 ntTSL 2 BASIC30.1■■■□□ 2.41
HOXC6P09630 CCM2-201ENST00000258781 1894 ntAPPRIS P3 TSL 1 (best) BASIC30.08■■■□□ 2.41
HOXC6P09630 NOG-201ENST00000332822 1892 ntAPPRIS P1 BASIC30.08■■■□□ 2.41
HOXC6P09630 PIGX-201ENST00000296333 953 ntAPPRIS ALT2 TSL 2 BASIC30.07■■■□□ 2.4
HOXC6P09630 AC016595.1-201ENST00000559410 383 ntTSL 3 BASIC30.07■■■□□ 2.4
HOXC6P09630 FMR1-219ENST00000621453 1864 ntTSL 1 (best) BASIC30.06■■■□□ 2.4
HOXC6P09630 SIAH1-203ENST00000394725 2147 ntAPPRIS P3 TSL 1 (best) BASIC30.05■■■□□ 2.4
HOXC6P09630 SRP68-213ENST00000629930 165 ntTSL 5 BASIC30.05■■■□□ 2.4
HOXC6P09630 TRNP1-201ENST00000522111 1958 ntAPPRIS P2 TSL 1 (best) BASIC30.04■■■□□ 2.4
HOXC6P09630 RUNX2-203ENST00000371436 1588 ntAPPRIS ALT2 TSL 5 BASIC30.04■■■□□ 2.4
HOXC6P09630 NME2-205ENST00000512737 826 ntAPPRIS P1 TSL 1 (best) BASIC30.03■■■□□ 2.4
HOXC6P09630 AC231981.1-201ENST00000450917 974 ntTSL 3 BASIC30.01■■■□□ 2.39
HOXC6P09630 CRNDE-206ENST00000559432 587 ntTSL 3 BASIC30.01■■■□□ 2.39
HOXC6P09630 AC009041.3-201ENST00000564390 879 ntTSL 5 BASIC30.01■■■□□ 2.39
HOXC6P09630 AC018755.3-201ENST00000598755 664 ntTSL 2 BASIC30.01■■■□□ 2.39
HOXC6P09630 ARL8A-204ENST00000614750 1727 ntTSL 3 BASIC30.01■■■□□ 2.39
HOXC6P09630 VEGFA-202ENST00000324450 954 ntTSL 1 (best) BASIC29.99■■■□□ 2.39
HOXC6P09630 VEGFA-203ENST00000372055 1286 ntTSL 1 (best) BASIC29.99■■■□□ 2.39
HOXC6P09630 VEGFA-213ENST00000482630 1146 ntTSL 1 (best) BASIC29.99■■■□□ 2.39
HOXC6P09630 VEGFA-227ENST00000615393 984 ntTSL 1 (best) BASIC29.99■■■□□ 2.39
HOXC6P09630 VEGFA-228ENST00000617771 1116 ntTSL 1 (best) BASIC29.99■■■□□ 2.39
HOXC6P09630 VEGFA-229ENST00000621747 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC29.99■■■□□ 2.39
HOXC6P09630 VEGFA-230ENST00000640482 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC29.99■■■□□ 2.39
HOXC6P09630 VEGFA-232ENST00000640653 1170 ntAPPRIS ALT2 TSL 1 (best) BASIC29.99■■■□□ 2.39
HOXC6P09630 WHRN-203ENST00000374057 1718 ntTSL 2 BASIC29.99■■■□□ 2.39
HOXC6P09630 AC007383.2-202ENST00000435627 482 ntTSL 2 BASIC29.98■■■□□ 2.39
HOXC6P09630 UBA52-204ENST00000595158 743 ntAPPRIS P1 TSL 3 BASIC29.98■■■□□ 2.39
HOXC6P09630 FTCD-202ENST00000397743 1834 ntTSL 1 (best) BASIC29.98■■■□□ 2.39
HOXC6P09630 MTCP1-202ENST00000369476 2274 ntAPPRIS P1 TSL 3 BASIC29.98■■■□□ 2.39
HOXC6P09630 GLRX5-201ENST00000331334 1564 ntAPPRIS P1 TSL 1 (best) BASIC29.98■■■□□ 2.39
HOXC6P09630 CNIH2-203ENST00000528852 1524 ntAPPRIS ALT1 TSL 1 (best) BASIC29.97■■■□□ 2.39
HOXC6P09630 XKR6-201ENST00000297303 1550 ntTSL 1 (best) BASIC29.97■■■□□ 2.39
HOXC6P09630 NOP53-201ENST00000246802 1528 ntAPPRIS P1 TSL 1 (best) BASIC29.96■■■□□ 2.39
HOXC6P09630 ATP8B2-201ENST00000368487 1523 ntTSL 1 (best) BASIC29.96■■■□□ 2.39
HOXC6P09630 AC092902.2-221ENST00000628476 965 ntTSL 5 BASIC29.96■■■□□ 2.39
HOXC6P09630 CTXN1-201ENST00000318978 1274 ntAPPRIS P1 TSL 1 (best) BASIC29.95■■■□□ 2.39
HOXC6P09630 POLR3H-201ENST00000337566 1330 ntTSL 1 (best) BASIC29.95■■■□□ 2.38
HOXC6P09630 SMDT1-201ENST00000331479 1567 ntAPPRIS P1 TSL 1 (best) BASIC29.94■■■□□ 2.38
HOXC6P09630 JMJD8-216ENST00000609261 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC29.94■■■□□ 2.38
HOXC6P09630 C14orf80-202ENST00000334656 1358 ntAPPRIS ALT2 TSL 2 BASIC29.94■■■□□ 2.38
HOXC6P09630 LINC02323-201ENST00000559946 1603 ntTSL 3 BASIC29.94■■■□□ 2.38
HOXC6P09630 GLRB-203ENST00000509282 1757 ntAPPRIS P1 TSL 1 (best) BASIC29.94■■■□□ 2.38
HOXC6P09630 NIT1-201ENST00000368007 1749 ntTSL 2 BASIC29.93■■■□□ 2.38
HOXC6P09630 TMEM251-202ENST00000415050 1303 ntTSL 2 BASIC29.93■■■□□ 2.38
HOXC6P09630 AVEN-201ENST00000306730 1605 ntAPPRIS P1 TSL 1 (best) BASIC29.93■■■□□ 2.38
HOXC6P09630 CSPG5-205ENST00000610462 2073 ntTSL 5 BASIC29.92■■■□□ 2.38
HOXC6P09630 RARRES2P2-201ENST00000394842 485 ntBASIC29.91■■■□□ 2.38
HOXC6P09630 MAZ-208ENST00000563402 1461 ntTSL 5 BASIC29.91■■■□□ 2.38
HOXC6P09630 MAZ-210ENST00000566906 1455 ntTSL 5 BASIC29.91■■■□□ 2.38
HOXC6P09630 FAM189B-210ENST00000621094 1335 ntTSL 1 (best) BASIC29.91■■■□□ 2.38
HOXC6P09630 GPI-201ENST00000356487 2210 ntAPPRIS P1 TSL 1 (best) BASIC29.9■■■□□ 2.38
HOXC6P09630 ZDHHC16-201ENST00000345745 1519 ntTSL 1 (best) BASIC29.9■■■□□ 2.38
HOXC6P09630 ABHD12-201ENST00000339157 2117 ntAPPRIS P1 TSL 2 BASIC29.89■■■□□ 2.38
HOXC6P09630 RASSF7-202ENST00000397583 1928 ntAPPRIS P3 TSL 1 (best) BASIC29.89■■■□□ 2.38
HOXC6P09630 LINC00273-201ENST00000539813 1452 ntBASIC29.89■■■□□ 2.38
HOXC6P09630 AC068134.2-201ENST00000437095 576 ntTSL 3 BASIC29.89■■■□□ 2.38
Retrieved 100 of 98,524 protein–RNA pairs in 15.6 ms