Protein–RNA interactions for Protein: P01730

CD4, T-cell surface glycoprotein CD4, humanhuman

Predictions only

Length 458 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD4P01730 EBPL-201ENST00000242827 914 ntAPPRIS P1 TSL 1 (best) BASIC29.49■■■□□ 2.31
CD4P01730 PPP4R4-202ENST00000328839 876 ntTSL 1 (best) BASIC29.49■■■□□ 2.31
CD4P01730 RANBP1-202ENST00000402752 1132 ntAPPRIS ALT1 TSL 1 (best) BASIC29.48■■■□□ 2.31
CD4P01730 DUX4L13-201ENST00000554103 1267 ntBASIC29.48■■■□□ 2.31
CD4P01730 EIF5A-208ENST00000573542 1089 ntAPPRIS P1 TSL 2 BASIC29.48■■■□□ 2.31
CD4P01730 DUX4L15-201ENST00000611059 1267 ntBASIC29.48■■■□□ 2.31
CD4P01730 DUX4L23-201ENST00000615195 1269 ntBASIC29.48■■■□□ 2.31
CD4P01730 DUX4L24-201ENST00000617576 1269 ntBASIC29.48■■■□□ 2.31
CD4P01730 DUX4L22-201ENST00000618238 1269 ntBASIC29.48■■■□□ 2.31
CD4P01730 DUX4L20-201ENST00000619712 1269 ntBASIC29.48■■■□□ 2.31
CD4P01730 DUX4L21-201ENST00000622058 1269 ntBASIC29.48■■■□□ 2.31
CD4P01730 DUX4L10-201ENST00000622460 1267 ntBASIC29.48■■■□□ 2.31
CD4P01730 DUX4L25-201ENST00000624915 1269 ntBASIC29.48■■■□□ 2.31
CD4P01730 RASSF7-202ENST00000397583 1928 ntAPPRIS P3 TSL 1 (best) BASIC29.47■■■□□ 2.31
CD4P01730 ANGPTL6-204ENST00000592641 1781 ntAPPRIS P1 TSL 1 (best) BASIC29.47■■■□□ 2.31
CD4P01730 DTNBP1-212ENST00000622898 1305 ntTSL 1 (best) BASIC29.46■■■□□ 2.31
CD4P01730 METRNL-202ENST00000570778 967 ntTSL 5 BASIC29.46■■■□□ 2.31
CD4P01730 PTPRF-216ENST00000617451 1129 ntTSL 5 BASIC29.46■■■□□ 2.31
CD4P01730 BTBD19-203ENST00000450269 1572 ntAPPRIS P1 TSL 5 BASIC29.46■■■□□ 2.31
CD4P01730 MTCP1-202ENST00000369476 2274 ntAPPRIS P1 TSL 3 BASIC29.46■■■□□ 2.31
CD4P01730 BCL7B-202ENST00000411832 1458 ntTSL 2 BASIC29.45■■■□□ 2.31
CD4P01730 H2AFV-204ENST00000350771 687 ntTSL 2 BASIC29.45■■■□□ 2.31
CD4P01730 STARD10-220ENST00000545082 1085 ntTSL 3 BASIC29.45■■■□□ 2.31
CD4P01730 RRAD-202ENST00000420652 1476 ntAPPRIS P1 TSL 1 (best) BASIC29.44■■■□□ 2.3
CD4P01730 AP000911.3-201ENST00000526377 1130 ntTSL 3 BASIC29.44■■■□□ 2.3
CD4P01730 RHOC-202ENST00000339083 1418 ntAPPRIS P1 TSL 1 (best) BASIC29.44■■■□□ 2.3
CD4P01730 CAAP1-205ENST00000520187 773 ntTSL 5 BASIC29.42■■■□□ 2.3
CD4P01730 CSPG5-205ENST00000610462 2073 ntTSL 5 BASIC29.41■■■□□ 2.3
CD4P01730 NOXA1-201ENST00000341349 1678 ntAPPRIS P1 TSL 1 (best) BASIC29.41■■■□□ 2.3
CD4P01730 MRPL51-201ENST00000229238 1234 ntAPPRIS P1 TSL 1 (best) BASIC29.41■■■□□ 2.3
CD4P01730 CHPT1-201ENST00000229266 1585 ntAPPRIS P2 TSL 1 (best) BASIC29.41■■■□□ 2.3
CD4P01730 OLFM2-201ENST00000264833 2019 ntAPPRIS P1 TSL 1 (best) BASIC29.4■■■□□ 2.3
CD4P01730 PCYT2-206ENST00000571105 1628 ntTSL 5 BASIC29.38■■■□□ 2.29
CD4P01730 HES6-205ENST00000409356 528 ntTSL 2 BASIC29.38■■■□□ 2.29
CD4P01730 C11orf95-204ENST00000546282 390 ntTSL 3 BASIC29.37■■■□□ 2.29
CD4P01730 UBALD1-203ENST00000587649 707 ntTSL 3 BASIC29.35■■■□□ 2.29
CD4P01730 ARL6IP4-211ENST00000454885 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC29.35■■■□□ 2.29
CD4P01730 PIK3R2-208ENST00000617642 1446 ntTSL 5 BASIC29.35■■■□□ 2.29
CD4P01730 AC018755.3-201ENST00000598755 664 ntTSL 2 BASIC29.33■■■□□ 2.29
CD4P01730 CHML-204ENST00000638121 920 ntTSL 2 BASIC29.33■■■□□ 2.29
CD4P01730 EI24-212ENST00000615917 1407 ntTSL 2 BASIC29.33■■■□□ 2.29
CD4P01730 GRASP-201ENST00000293662 1933 ntAPPRIS P1 TSL 1 (best) BASIC29.32■■■□□ 2.28
CD4P01730 NME2-205ENST00000512737 826 ntAPPRIS P1 TSL 1 (best) BASIC29.32■■■□□ 2.28
CD4P01730 PIGX-201ENST00000296333 953 ntAPPRIS ALT2 TSL 2 BASIC29.31■■■□□ 2.28
CD4P01730 AC105285.1-201ENST00000500914 2036 ntTSL 1 (best) BASIC29.3■■■□□ 2.28
CD4P01730 HNRNPAB-206ENST00000506339 1747 ntAPPRIS ALT2 TSL 5 BASIC29.3■■■□□ 2.28
CD4P01730 AP000251.1-201ENST00000433071 822 ntTSL 1 (best) BASIC29.29■■■□□ 2.28
CD4P01730 AC007383.2-202ENST00000435627 482 ntTSL 2 BASIC29.29■■■□□ 2.28
CD4P01730 AC016595.1-201ENST00000559410 383 ntTSL 3 BASIC29.29■■■□□ 2.28
CD4P01730 SRP68-213ENST00000629930 165 ntTSL 5 BASIC29.29■■■□□ 2.28
CD4P01730 TSPAN11-203ENST00000545802 1649 ntTSL 1 (best) BASIC29.29■■■□□ 2.28
CD4P01730 CCM2-201ENST00000258781 1894 ntAPPRIS P3 TSL 1 (best) BASIC29.28■■■□□ 2.28
CD4P01730 BATF3-201ENST00000243440 980 ntAPPRIS P1 TSL 1 (best) BASIC29.28■■■□□ 2.28
CD4P01730 PDXP-201ENST00000215904 2010 ntAPPRIS P1 TSL 1 (best) BASIC29.27■■■□□ 2.28
CD4P01730 AC009041.3-201ENST00000564390 879 ntTSL 5 BASIC29.27■■■□□ 2.28
CD4P01730 AC120057.4-201ENST00000624722 1615 ntBASIC29.27■■■□□ 2.28
CD4P01730 RUNX2-203ENST00000371436 1588 ntAPPRIS ALT2 TSL 5 BASIC29.26■■■□□ 2.27
CD4P01730 PLEKHG6-206ENST00000536531 1683 ntTSL 1 (best) BASIC29.25■■■□□ 2.27
CD4P01730 CRNDE-206ENST00000559432 587 ntTSL 3 BASIC29.25■■■□□ 2.27
CD4P01730 NIT1-201ENST00000368007 1749 ntTSL 2 BASIC29.25■■■□□ 2.27
CD4P01730 AP002884.3-203ENST00000419895 1711 ntTSL 2 BASIC29.24■■■□□ 2.27
CD4P01730 VEGFA-202ENST00000324450 954 ntTSL 1 (best) BASIC29.23■■■□□ 2.27
CD4P01730 VEGFA-203ENST00000372055 1286 ntTSL 1 (best) BASIC29.23■■■□□ 2.27
CD4P01730 VEGFA-213ENST00000482630 1146 ntTSL 1 (best) BASIC29.23■■■□□ 2.27
CD4P01730 VEGFA-227ENST00000615393 984 ntTSL 1 (best) BASIC29.23■■■□□ 2.27
CD4P01730 VEGFA-228ENST00000617771 1116 ntTSL 1 (best) BASIC29.23■■■□□ 2.27
CD4P01730 VEGFA-229ENST00000621747 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC29.23■■■□□ 2.27
CD4P01730 VEGFA-230ENST00000640482 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC29.23■■■□□ 2.27
CD4P01730 VEGFA-232ENST00000640653 1170 ntAPPRIS ALT2 TSL 1 (best) BASIC29.23■■■□□ 2.27
CD4P01730 MYLIP-202ENST00000356840 1666 ntAPPRIS P1 TSL 1 (best) BASIC29.23■■■□□ 2.27
CD4P01730 ARL8A-204ENST00000614750 1727 ntTSL 3 BASIC29.21■■■□□ 2.27
CD4P01730 POLR3H-201ENST00000337566 1330 ntTSL 1 (best) BASIC29.2■■■□□ 2.26
CD4P01730 NOG-201ENST00000332822 1892 ntAPPRIS P1 BASIC29.19■■■□□ 2.26
CD4P01730 RARRES2P2-201ENST00000394842 485 ntBASIC29.19■■■□□ 2.26
CD4P01730 AC231981.1-201ENST00000450917 974 ntTSL 3 BASIC29.19■■■□□ 2.26
CD4P01730 UBA52-204ENST00000595158 743 ntAPPRIS P1 TSL 3 BASIC29.19■■■□□ 2.26
CD4P01730 WHRN-203ENST00000374057 1718 ntTSL 2 BASIC29.18■■■□□ 2.26
CD4P01730 MSRB2-201ENST00000376510 1803 ntAPPRIS P1 TSL 1 (best) BASIC29.17■■■□□ 2.26
CD4P01730 CTXN1-201ENST00000318978 1274 ntAPPRIS P1 TSL 1 (best) BASIC29.17■■■□□ 2.26
CD4P01730 AC092902.2-221ENST00000628476 965 ntTSL 5 BASIC29.17■■■□□ 2.26
CD4P01730 ZBTB12-201ENST00000375527 1875 ntAPPRIS P1 TSL 1 (best) BASIC29.17■■■□□ 2.26
CD4P01730 ATP8B2-201ENST00000368487 1523 ntTSL 1 (best) BASIC29.16■■■□□ 2.26
CD4P01730 NPTXR-202ENST00000640136 1503 ntAPPRIS P2 TSL 1 (best) BASIC29.16■■■□□ 2.26
CD4P01730 U2AF1-203ENST00000398137 1019 ntTSL 1 (best) BASIC29.15■■■□□ 2.26
CD4P01730 AC068134.2-201ENST00000437095 576 ntTSL 3 BASIC29.15■■■□□ 2.26
CD4P01730 U2AF1L5-212ENST00000639996 1019 ntTSL 1 (best) BASIC29.15■■■□□ 2.26
CD4P01730 BCL7B-201ENST00000223368 1975 ntAPPRIS P1 TSL 1 (best) BASIC29.14■■■□□ 2.26
CD4P01730 RPS20-211ENST00000524349 752 ntTSL 1 (best) BASIC29.14■■■□□ 2.26
CD4P01730 GPI-201ENST00000356487 2210 ntAPPRIS P1 TSL 1 (best) BASIC29.14■■■□□ 2.26
CD4P01730 TRNP1-201ENST00000522111 1958 ntAPPRIS P2 TSL 1 (best) BASIC29.12■■■□□ 2.25
CD4P01730 PKIG-207ENST00000372894 1191 ntAPPRIS P1 TSL 1 (best) BASIC29.11■■■□□ 2.25
CD4P01730 PTPMT1-203ENST00000426530 1014 ntTSL 1 (best) BASIC29.11■■■□□ 2.25
CD4P01730 SMDT1-201ENST00000331479 1567 ntAPPRIS P1 TSL 1 (best) BASIC29.1■■■□□ 2.25
CD4P01730 ELOC-207ENST00000522337 816 ntAPPRIS P1 TSL 2 BASIC29.1■■■□□ 2.25
CD4P01730 ABHD17AP5-201ENST00000580133 923 ntBASIC29.1■■■□□ 2.25
CD4P01730 ZBTB25-202ENST00000555220 1440 ntTSL 1 (best) BASIC29.1■■■□□ 2.25
CD4P01730 TMEM229A-201ENST00000455783 2108 ntAPPRIS P1 BASIC29.09■■■□□ 2.25
CD4P01730 LINC02323-201ENST00000559946 1603 ntTSL 3 BASIC29.09■■■□□ 2.25
CD4P01730 GPX1-201ENST00000419349 1106 ntBASIC29.09■■■□□ 2.25
CD4P01730 TMEM251-202ENST00000415050 1303 ntTSL 2 BASIC29.09■■■□□ 2.25
Retrieved 100 of 98,524 protein–RNA pairs in 11.7 ms