Protein–RNA interactions for Protein: P43005

SLC1A1, Excitatory amino acid transporter 3, humanhuman

Predictions only

Length 524 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC1A1P43005 TMEM2-205ENST00000377066 5217 ntAPPRIS ALT1 TSL 1 (best) BASIC9.18□□□□□ -0.94
SLC1A1P43005 ERCC6-208ENST00000515869 3439 ntTSL 2 BASIC9.18□□□□□ -0.94
SLC1A1P43005 CASP8-205ENST00000358485 2930 ntAPPRIS ALT2 TSL 1 (best) BASIC9.18□□□□□ -0.94
SLC1A1P43005 RXFP2-202ENST00000380314 2731 ntAPPRIS ALT2 TSL 1 (best) BASIC9.18□□□□□ -0.94
SLC1A1P43005 ARHGEF9-201ENST00000253401 5413 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
SLC1A1P43005 AC138904.1-201ENST00000501520 2481 ntTSL 1 (best) BASIC9.17□□□□□ -0.94
SLC1A1P43005 CREBRF-205ENST00000522692 2466 ntTSL 1 (best) BASIC9.17□□□□□ -0.94
SLC1A1P43005 AGTPBP1-202ENST00000357081 4393 ntTSL 5 BASIC9.17□□□□□ -0.94
SLC1A1P43005 AC100756.3-201ENST00000618455 1816 ntBASIC9.17□□□□□ -0.94
SLC1A1P43005 WDPCP-206ENST00000409562 3544 ntAPPRIS ALT2 TSL 1 (best) BASIC9.17□□□□□ -0.94
SLC1A1P43005 AC007638.2-201ENST00000574716 1740 ntTSL 2 BASIC9.17□□□□□ -0.94
SLC1A1P43005 MIER1-201ENST00000355356 4818 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
SLC1A1P43005 WDR19-201ENST00000399820 4520 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
SLC1A1P43005 AC090061.1-202ENST00000502102 1449 ntTSL 1 (best) BASIC9.17□□□□□ -0.94
SLC1A1P43005 CALML4-203ENST00000395465 4155 ntTSL 1 (best) BASIC9.17□□□□□ -0.94
SLC1A1P43005 LMCD1-AS1-203ENST00000441861 2683 ntTSL 2 BASIC9.17□□□□□ -0.94
SLC1A1P43005 GHRH-203ENST00000373614 570 ntAPPRIS P3 TSL 1 (best) BASIC9.17□□□□□ -0.94
SLC1A1P43005 AC005005.1-201ENST00000397595 682 ntBASIC9.17□□□□□ -0.94
SLC1A1P43005 RN7SKP139-201ENST00000410411 293 ntBASIC9.17□□□□□ -0.94
SLC1A1P43005 AL589763.1-201ENST00000412257 791 ntBASIC9.17□□□□□ -0.94
SLC1A1P43005 LINC00111-201ENST00000413718 575 ntTSL 3 BASIC9.17□□□□□ -0.94
SLC1A1P43005 ZFY-AS1-201ENST00000417305 500 ntTSL 2 BASIC9.17□□□□□ -0.94
SLC1A1P43005 FAM213AP1-201ENST00000418757 668 ntBASIC9.17□□□□□ -0.94
SLC1A1P43005 ACTG1P24-201ENST00000423783 877 ntBASIC9.17□□□□□ -0.94
SLC1A1P43005 KIF9-203ENST00000425452 640 ntTSL 3 BASIC9.17□□□□□ -0.94
SLC1A1P43005 FGL1-205ENST00000427924 1247 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
SLC1A1P43005 TRMT112P4-201ENST00000429016 379 ntBASIC9.17□□□□□ -0.94
SLC1A1P43005 Z83841.1-201ENST00000433173 968 ntBASIC9.17□□□□□ -0.94
SLC1A1P43005 AC244205.2-201ENST00000434790 898 ntTSL 5 BASIC9.17□□□□□ -0.94
SLC1A1P43005 GK-AS1-201ENST00000464659 651 ntTSL 3 BASIC9.17□□□□□ -0.94
SLC1A1P43005 AC092943.1-201ENST00000485389 878 ntBASIC9.17□□□□□ -0.94
SLC1A1P43005 AL645949.1-201ENST00000510094 324 ntBASIC9.17□□□□□ -0.94
SLC1A1P43005 AC022730.3-201ENST00000521051 736 ntTSL 5 BASIC9.17□□□□□ -0.94
SLC1A1P43005 AC131902.1-201ENST00000521558 594 ntTSL 3 BASIC9.17□□□□□ -0.94
SLC1A1P43005 AP004245.1-201ENST00000530434 259 ntBASIC9.17□□□□□ -0.94
SLC1A1P43005 AC025423.3-201ENST00000541551 469 ntBASIC9.17□□□□□ -0.94
SLC1A1P43005 AP4S1-206ENST00000554609 1012 ntTSL 5 BASIC9.17□□□□□ -0.94
SLC1A1P43005 AC090164.1-201ENST00000560214 664 ntBASIC9.17□□□□□ -0.94
SLC1A1P43005 AC009093.2-201ENST00000563477 546 ntTSL 4 BASIC9.17□□□□□ -0.94
SLC1A1P43005 AC120045.1-202ENST00000567770 1068 ntBASIC9.17□□□□□ -0.94
SLC1A1P43005 LINC02124-201ENST00000570087 484 ntTSL 2 BASIC9.17□□□□□ -0.94
SLC1A1P43005 ZNF213-AS1-208ENST00000575139 530 ntTSL 4 BASIC9.17□□□□□ -0.94
SLC1A1P43005 RN7SL457P-201ENST00000578760 287 ntBASIC9.17□□□□□ -0.94
SLC1A1P43005 AP005328.1-202ENST00000580781 776 ntTSL 3 BASIC9.17□□□□□ -0.94
SLC1A1P43005 RN7SL378P-201ENST00000582657 298 ntBASIC9.17□□□□□ -0.94
SLC1A1P43005 C5orf58-206ENST00000593851 509 ntAPPRIS P5 TSL 2 BASIC9.17□□□□□ -0.94
SLC1A1P43005 AP001469.1-202ENST00000626933 695 ntTSL 5 BASIC9.17□□□□□ -0.94
SLC1A1P43005 HLA-B-258ENST00000640615 240 ntBASIC9.17□□□□□ -0.94
SLC1A1P43005 SLFN12-206ENST00000452764 2423 ntAPPRIS P1 TSL 2 BASIC9.17□□□□□ -0.94
SLC1A1P43005 CABYR-202ENST00000399481 2252 ntAPPRIS ALT2 TSL 1 (best) BASIC9.17□□□□□ -0.94
SLC1A1P43005 Z97200.1-201ENST00000606154 2045 ntBASIC9.17□□□□□ -0.94
SLC1A1P43005 TAF1-201ENST00000276072 5692 ntAPPRIS P3 TSL 5 BASIC9.17□□□□□ -0.94
SLC1A1P43005 TLR1-202ENST00000502213 2779 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
SLC1A1P43005 HELQ-201ENST00000295488 3579 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
SLC1A1P43005 RCAN1-208ENST00000482533 2686 ntTSL 1 (best) BASIC9.17□□□□□ -0.94
SLC1A1P43005 SEPT4-202ENST00000317268 1784 ntAPPRIS P4 TSL 1 (best) BASIC9.17□□□□□ -0.94
SLC1A1P43005 SOCS6-203ENST00000582322 2625 ntAPPRIS P1 TSL 3 BASIC9.17□□□□□ -0.94
SLC1A1P43005 AC096642.1-201ENST00000612055 2614 ntBASIC9.17□□□□□ -0.94
SLC1A1P43005 STRADA-233ENST00000638888 1718 ntTSL 5 BASIC9.17□□□□□ -0.94
SLC1A1P43005 TFIP11-217ENST00000619735 3402 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
SLC1A1P43005 METTL7A-203ENST00000548553 4076 ntAPPRIS P1 TSL 5 BASIC9.16□□□□□ -0.94
SLC1A1P43005 AL162632.3-201ENST00000566976 1625 ntBASIC9.16□□□□□ -0.94
SLC1A1P43005 MID1-201ENST00000317552 6463 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
SLC1A1P43005 CCT6P2-201ENST00000507234 1593 ntBASIC9.16□□□□□ -0.94
SLC1A1P43005 EPN2-204ENST00000395620 3860 ntAPPRIS ALT1 TSL 1 (best) BASIC9.16□□□□□ -0.94
SLC1A1P43005 AC016705.2-202ENST00000559008 6878 ntTSL 3 BASIC9.16□□□□□ -0.94
SLC1A1P43005 AMBN-202ENST00000449493 1512 ntAPPRIS ALT2 TSL 5 BASIC9.16□□□□□ -0.94
SLC1A1P43005 GEMIN6-201ENST00000281950 3728 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
SLC1A1P43005 C4BPA-201ENST00000367070 2243 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
SLC1A1P43005 SLC24A2-201ENST00000286344 2170 ntTSL 1 (best) BASIC9.16□□□□□ -0.94
SLC1A1P43005 DOCK8-205ENST00000453981 7237 ntTSL 5 BASIC9.16□□□□□ -0.94
SLC1A1P43005 LINC00607-204ENST00000423530 2104 ntTSL 2 BASIC9.16□□□□□ -0.94
SLC1A1P43005 GLULP5-201ENST00000547831 1390 ntBASIC9.16□□□□□ -0.94
SLC1A1P43005 TMEM169-201ENST00000295658 3342 ntAPPRIS P1 TSL 2 BASIC9.16□□□□□ -0.94
SLC1A1P43005 NOP14-AS1-207ENST00000515194 3860 ntTSL 1 (best) BASIC9.16□□□□□ -0.94
SLC1A1P43005 RFX4-202ENST00000357881 2565 ntTSL 1 (best) BASIC9.16□□□□□ -0.94
SLC1A1P43005 GFRAL-201ENST00000340465 1911 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
SLC1A1P43005 AL109615.1-201ENST00000331979 455 ntBASIC9.16□□□□□ -0.94
SLC1A1P43005 LAIR2-202ENST00000351841 538 ntAPPRIS ALT2 TSL 1 (best) BASIC9.16□□□□□ -0.94
SLC1A1P43005 RAB19-201ENST00000356407 822 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
SLC1A1P43005 AC090559.2-201ENST00000366360 430 ntTSL 5 BASIC9.16□□□□□ -0.94
SLC1A1P43005 CENPW-201ENST00000368325 528 ntTSL 3 BASIC9.16□□□□□ -0.94
SLC1A1P43005 FAM209A-201ENST00000371328 911 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
SLC1A1P43005 IGKV1D-12-201ENST00000377032 371 ntAPPRIS P1 BASIC9.16□□□□□ -0.94
SLC1A1P43005 SNORD83A-201ENST00000386747 95 ntBASIC9.16□□□□□ -0.94
SLC1A1P43005 AL024509.1-201ENST00000397093 927 ntBASIC9.16□□□□□ -0.94
SLC1A1P43005 CD160-203ENST00000401557 705 ntAPPRIS ALT2 TSL 1 (best) BASIC9.16□□□□□ -0.94
SLC1A1P43005 NPM1P32-201ENST00000412580 604 ntBASIC9.16□□□□□ -0.94
SLC1A1P43005 HCG24-202ENST00000414398 717 ntTSL 3 BASIC9.16□□□□□ -0.94
SLC1A1P43005 PHBP7-201ENST00000415677 814 ntBASIC9.16□□□□□ -0.94
SLC1A1P43005 E2F4P1-201ENST00000422443 1133 ntBASIC9.16□□□□□ -0.94
SLC1A1P43005 AC090044.1-201ENST00000423193 497 ntTSL 2 BASIC9.16□□□□□ -0.94
SLC1A1P43005 PAICSP3-201ENST00000428007 1168 ntBASIC9.16□□□□□ -0.94
SLC1A1P43005 IFNA13-201ENST00000449498 634 ntAPPRIS ALT1 BASIC9.16□□□□□ -0.94
SLC1A1P43005 AL445673.1-201ENST00000455124 416 ntTSL 3 BASIC9.16□□□□□ -0.94
SLC1A1P43005 AC022701.1-201ENST00000462935 622 ntBASIC9.16□□□□□ -0.94
SLC1A1P43005 AC025062.1-201ENST00000465163 644 ntBASIC9.16□□□□□ -0.94
SLC1A1P43005 RN7SL35P-201ENST00000466169 292 ntBASIC9.16□□□□□ -0.94
SLC1A1P43005 AC009078.1-201ENST00000474978 783 ntBASIC9.16□□□□□ -0.94
SLC1A1P43005 AC115837.1-201ENST00000517662 1001 ntBASIC9.16□□□□□ -0.94
Retrieved 100 of 98,524 protein–RNA pairs in 63.4 ms