Protein–RNA interactions for Protein: Q6PIF2

SYCE2, Synaptonemal complex central element protein 2, humanhuman

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYCE2Q6PIF2 FIGNL1-206ENST00000433017 3626 ntAPPRIS P1 TSL 2 BASIC9.31□□□□□ -0.92
SYCE2Q6PIF2 BLOC1S6-218ENST00000568816 4013 ntTSL 2 BASIC9.31□□□□□ -0.92
SYCE2Q6PIF2 TCF4-254ENST00000626584 1701 ntTSL 5 BASIC9.31□□□□□ -0.92
SYCE2Q6PIF2 SNX19P1-201ENST00000444901 2981 ntBASIC9.31□□□□□ -0.92
SYCE2Q6PIF2 SCAF11-202ENST00000369367 7543 ntAPPRIS P2 TSL 1 (best) BASIC9.31□□□□□ -0.92
SYCE2Q6PIF2 AP1G1-202ENST00000393512 3593 ntAPPRIS ALT1 TSL 5 BASIC9.31□□□□□ -0.92
SYCE2Q6PIF2 MALAT1-202ENST00000534336 8708 ntBASIC9.31□□□□□ -0.92
SYCE2Q6PIF2 CNIH4-202ENST00000366857 3963 ntTSL 1 (best) BASIC9.31□□□□□ -0.92
SYCE2Q6PIF2 MED7-201ENST00000286317 2402 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
SYCE2Q6PIF2 IPO11-201ENST00000325324 4356 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
SYCE2Q6PIF2 SRPK1-205ENST00000423325 4357 ntTSL 2 BASIC9.31□□□□□ -0.92
SYCE2Q6PIF2 PTGS1-203ENST00000373698 4987 ntTSL 2 BASIC9.31□□□□□ -0.92
SYCE2Q6PIF2 CACNA2D4-223ENST00000588077 3311 ntAPPRIS ALT2 TSL 5 BASIC9.31□□□□□ -0.92
SYCE2Q6PIF2 CPSF4L-201ENST00000344935 647 ntAPPRIS P2 TSL 1 (best) BASIC9.31□□□□□ -0.92
SYCE2Q6PIF2 CREM-213ENST00000374734 711 ntTSL 5 BASIC9.31□□□□□ -0.92
SYCE2Q6PIF2 AIF1-203ENST00000376059 711 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
SYCE2Q6PIF2 RFKP1-201ENST00000400940 428 ntBASIC9.31□□□□□ -0.92
SYCE2Q6PIF2 CFL1P7-201ENST00000424759 486 ntBASIC9.31□□□□□ -0.92
SYCE2Q6PIF2 LINC01425-202ENST00000430060 760 ntTSL 1 (best) BASIC9.31□□□□□ -0.92
SYCE2Q6PIF2 ZNF195-208ENST00000438262 1018 ntTSL 3 BASIC9.31□□□□□ -0.92
SYCE2Q6PIF2 CLUHP5-201ENST00000438421 774 ntBASIC9.31□□□□□ -0.92
SYCE2Q6PIF2 LINC01961-201ENST00000449954 745 ntTSL 5 BASIC9.31□□□□□ -0.92
SYCE2Q6PIF2 CREM-231ENST00000479070 939 ntTSL 5 BASIC9.31□□□□□ -0.92
SYCE2Q6PIF2 LINC02016-201ENST00000488425 927 ntTSL 1 (best) BASIC9.31□□□□□ -0.92
SYCE2Q6PIF2 RN7SL538P-201ENST00000494227 304 ntBASIC9.31□□□□□ -0.92
SYCE2Q6PIF2 LINC01331-201ENST00000507781 568 ntTSL 4 BASIC9.31□□□□□ -0.92
SYCE2Q6PIF2 AC015909.1-201ENST00000509943 839 ntTSL 3 BASIC9.31□□□□□ -0.92
SYCE2Q6PIF2 SNRPCP14-201ENST00000524498 205 ntBASIC9.31□□□□□ -0.92
SYCE2Q6PIF2 CHURC1-202ENST00000548752 439 ntTSL 2 BASIC9.31□□□□□ -0.92
SYCE2Q6PIF2 AC005722.3-201ENST00000580884 446 ntTSL 3 BASIC9.31□□□□□ -0.92
SYCE2Q6PIF2 AC005323.1-203ENST00000585303 566 ntTSL 5 BASIC9.31□□□□□ -0.92
SYCE2Q6PIF2 AL121928.1-201ENST00000608017 521 ntBASIC9.31□□□□□ -0.92
SYCE2Q6PIF2 MIR6872-201ENST00000612981 62 ntBASIC9.31□□□□□ -0.92
SYCE2Q6PIF2 Metazoa_SRP.60-201ENST00000616888 305 ntBASIC9.31□□□□□ -0.92
SYCE2Q6PIF2 KRTAP7-1-201ENST00000621162 721 ntAPPRIS P1 BASIC9.31□□□□□ -0.92
SYCE2Q6PIF2 LINC02086-204ENST00000628006 786 ntTSL 5 BASIC9.31□□□□□ -0.92
SYCE2Q6PIF2 BBS9-203ENST00000355070 4004 ntAPPRIS P3 TSL 5 BASIC9.31□□□□□ -0.92
SYCE2Q6PIF2 DPF3-216ENST00000614862 4221 ntTSL 5 BASIC9.31□□□□□ -0.92
SYCE2Q6PIF2 NAA16-201ENST00000379406 4347 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
SYCE2Q6PIF2 USP17L8-201ENST00000527080 1593 ntAPPRIS P1 BASIC9.31□□□□□ -0.92
SYCE2Q6PIF2 SAYSD1-202ENST00000373249 1972 ntTSL 1 (best) BASIC9.31□□□□□ -0.92
SYCE2Q6PIF2 AC240565.2-201ENST00000623180 2096 ntTSL 5 BASIC9.31□□□□□ -0.92
SYCE2Q6PIF2 LARP1B-202ENST00000394288 2151 ntTSL 1 (best) BASIC9.31□□□□□ -0.92
SYCE2Q6PIF2 SLC7A7-215ENST00000555702 2272 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
SYCE2Q6PIF2 DAZL-202ENST00000399444 3050 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
SYCE2Q6PIF2 NR4A2-201ENST00000339562 3472 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
SYCE2Q6PIF2 ANKRD20A5P-201ENST00000431648 3556 ntBASIC9.31□□□□□ -0.92
SYCE2Q6PIF2 RPGR-202ENST00000339363 3686 ntAPPRIS ALT2 TSL 5 BASIC9.31□□□□□ -0.92
SYCE2Q6PIF2 SCN8A-203ENST00000545061 11433 ntTSL 5 BASIC9.31□□□□□ -0.92
SYCE2Q6PIF2 AARS2-201ENST00000244571 3854 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
SYCE2Q6PIF2 TRPV1-207ENST00000572705 4166 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
SYCE2Q6PIF2 ELP2-203ENST00000358232 8459 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
SYCE2Q6PIF2 A1CF-201ENST00000282641 9350 ntAPPRIS ALT1 TSL 2 BASIC9.31□□□□□ -0.92
SYCE2Q6PIF2 DNAH11-212ENST00000620169 13670 ntAPPRIS ALT2 TSL 5 BASIC9.31□□□□□ -0.92
SYCE2Q6PIF2 RASSF2-202ENST00000379400 5427 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
SYCE2Q6PIF2 AC079331.2-201ENST00000623462 2546 ntBASIC9.31□□□□□ -0.92
SYCE2Q6PIF2 NFIA-206ENST00000371191 1916 ntTSL 5 BASIC9.31□□□□□ -0.92
SYCE2Q6PIF2 ZNF41-201ENST00000313116 4297 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
SYCE2Q6PIF2 SRPK2-202ENST00000393651 3650 ntAPPRIS ALT2 TSL 2 BASIC9.3□□□□□ -0.92
SYCE2Q6PIF2 CYP2B7P-203ENST00000599198 2956 ntTSL 1 (best) BASIC9.3□□□□□ -0.92
SYCE2Q6PIF2 L3MBTL3-203ENST00000368139 4148 ntAPPRIS ALT2 TSL 5 BASIC9.3□□□□□ -0.92
SYCE2Q6PIF2 LMO7-218ENST00000526202 4121 ntTSL 2 BASIC9.3□□□□□ -0.92
SYCE2Q6PIF2 LINC01877-203ENST00000439734 2287 ntTSL 1 (best) BASIC9.3□□□□□ -0.92
SYCE2Q6PIF2 C7orf71-201ENST00000409974 1956 ntTSL 2 BASIC9.3□□□□□ -0.92
SYCE2Q6PIF2 MIR3976HG-202ENST00000566533 1690 ntTSL 1 (best) BASIC9.3□□□□□ -0.92
SYCE2Q6PIF2 C1orf198-202ENST00000427697 3666 ntAPPRIS ALT2 TSL 2 BASIC9.3□□□□□ -0.92
SYCE2Q6PIF2 SLC30A8-202ENST00000456015 2520 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
SYCE2Q6PIF2 EXOSC9-201ENST00000243498 1481 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
SYCE2Q6PIF2 ATP8A2-201ENST00000255283 3287 ntTSL 5 BASIC9.3□□□□□ -0.92
SYCE2Q6PIF2 NBPF19-202ENST00000426482 2344 ntTSL 5 BASIC9.3□□□□□ -0.92
SYCE2Q6PIF2 COL6A4P1-201ENST00000446690 2336 ntTSL 2 BASIC9.3□□□□□ -0.92
SYCE2Q6PIF2 LINC01929-201ENST00000589125 3067 ntTSL 2 BASIC9.3□□□□□ -0.92
SYCE2Q6PIF2 C2orf49-201ENST00000258457 4768 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
SYCE2Q6PIF2 TAC1-203ENST00000350485 975 ntTSL 5 BASIC9.3□□□□□ -0.92
SYCE2Q6PIF2 OR11G2-201ENST00000357366 1038 ntBASIC9.3□□□□□ -0.92
SYCE2Q6PIF2 LY6G6D-223ENST00000375825 402 ntAPPRIS P2 TSL 1 (best) BASIC9.3□□□□□ -0.92
SYCE2Q6PIF2 TRBV6-1-201ENST00000390353 401 ntAPPRIS P1 BASIC9.3□□□□□ -0.92
SYCE2Q6PIF2 LINC02271-201ENST00000398777 546 ntTSL 4 BASIC9.3□□□□□ -0.92
SYCE2Q6PIF2 PPIAP2-201ENST00000414143 492 ntBASIC9.3□□□□□ -0.92
SYCE2Q6PIF2 LINC02262-201ENST00000416680 735 ntTSL 3 BASIC9.3□□□□□ -0.92
SYCE2Q6PIF2 ENTPD3-AS1-201ENST00000420850 791 ntTSL 2 BASIC9.3□□□□□ -0.92
SYCE2Q6PIF2 AC006013.1-201ENST00000424888 758 ntTSL 3 BASIC9.3□□□□□ -0.92
SYCE2Q6PIF2 AC004006.1-201ENST00000434994 377 ntBASIC9.3□□□□□ -0.92
SYCE2Q6PIF2 TMEM127-203ENST00000435268 582 ntTSL 3 BASIC9.3□□□□□ -0.92
SYCE2Q6PIF2 PRSS37-203ENST00000438520 826 ntAPPRIS P1 TSL 5 BASIC9.3□□□□□ -0.92
SYCE2Q6PIF2 AL355312.3-201ENST00000472053 312 ntTSL 3 BASIC9.3□□□□□ -0.92
SYCE2Q6PIF2 OR2A7-201ENST00000493325 1116 ntAPPRIS P1 BASIC9.3□□□□□ -0.92
SYCE2Q6PIF2 RN7SL792P-201ENST00000496286 305 ntBASIC9.3□□□□□ -0.92
SYCE2Q6PIF2 LINC00491-201ENST00000505527 722 ntTSL 3 BASIC9.3□□□□□ -0.92
SYCE2Q6PIF2 ANAPC10-209ENST00000507656 1025 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
SYCE2Q6PIF2 AC138866.1-201ENST00000514522 497 ntBASIC9.3□□□□□ -0.92
SYCE2Q6PIF2 IGHVII-22-1-201ENST00000517888 265 ntBASIC9.3□□□□□ -0.92
SYCE2Q6PIF2 AP001372.3-201ENST00000530510 609 ntTSL 2 BASIC9.3□□□□□ -0.92
SYCE2Q6PIF2 AC093249.3-201ENST00000562444 424 ntBASIC9.3□□□□□ -0.92
SYCE2Q6PIF2 AC006120.1-201ENST00000579375 546 ntBASIC9.3□□□□□ -0.92
SYCE2Q6PIF2 AC090358.1-201ENST00000579862 852 ntTSL 3 BASIC9.3□□□□□ -0.92
SYCE2Q6PIF2 MIR4450-201ENST00000583589 65 ntBASIC9.3□□□□□ -0.92
SYCE2Q6PIF2 ZNF528-210ENST00000594530 544 ntTSL 3 BASIC9.3□□□□□ -0.92
SYCE2Q6PIF2 LINC02018-202ENST00000608707 445 ntTSL 3 BASIC9.3□□□□□ -0.92
SYCE2Q6PIF2 Metazoa_SRP.39-201ENST00000614194 271 ntBASIC9.3□□□□□ -0.92
Retrieved 100 of 98,524 protein–RNA pairs in 57.2 ms