Protein–RNA interactions for Protein: O95155

UBE4B, Ubiquitin conjugation factor E4 B, humanhuman

Predictions only

Length 1,302 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4BO95155 TNPO3-203ENST00000471234 3283 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
UBE4BO95155 GNG2-201ENST00000335281 3729 ntAPPRIS P1 TSL 2 BASIC9.68□□□□□ -0.86
UBE4BO95155 CALCR-205ENST00000421592 3626 ntAPPRIS ALT2 TSL 1 (best) BASIC9.68□□□□□ -0.86
UBE4BO95155 ZNF471-202ENST00000591537 5859 ntTSL 2 BASIC9.68□□□□□ -0.86
UBE4BO95155 ZNF449-202ENST00000370761 2051 ntTSL 2 BASIC9.68□□□□□ -0.86
UBE4BO95155 GPR82-201ENST00000302548 3349 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
UBE4BO95155 AC011978.1-201ENST00000523386 1406 ntBASIC9.68□□□□□ -0.86
UBE4BO95155 NEDD4L-201ENST00000256830 2920 ntTSL 5 BASIC9.68□□□□□ -0.86
UBE4BO95155 EIF3F-208ENST00000533626 7540 ntAPPRIS P1 TSL 2 BASIC9.68□□□□□ -0.86
UBE4BO95155 SLMAP-219ENST00000494088 1305 ntTSL 2 BASIC9.68□□□□□ -0.86
UBE4BO95155 CELF2-204ENST00000417956 8044 ntAPPRIS P3 TSL 1 (best) BASIC9.68□□□□□ -0.86
UBE4BO95155 MIR3976HG-202ENST00000566533 1690 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
UBE4BO95155 IL17RD-202ENST00000320057 4474 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
UBE4BO95155 MYOM1-201ENST00000261606 5154 ntAPPRIS ALT2 TSL 1 (best) BASIC9.68□□□□□ -0.86
UBE4BO95155 DHRS9-201ENST00000357546 1917 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
UBE4BO95155 ALPK1-203ENST00000458497 5410 ntAPPRIS P3 TSL 5 BASIC9.67□□□□□ -0.86
UBE4BO95155 DCLRE1B-201ENST00000369563 3940 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
UBE4BO95155 SLFN12-202ENST00000394562 2539 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
UBE4BO95155 FSHR-201ENST00000304421 2176 ntAPPRIS ALT2 TSL 1 (best) BASIC9.67□□□□□ -0.86
UBE4BO95155 ELOC-205ENST00000520210 1451 ntTSL 1 (best) BASIC9.67□□□□□ -0.86
UBE4BO95155 FLT1-206ENST00000615611 1476 ntTSL 1 (best) BASIC9.67□□□□□ -0.86
UBE4BO95155 CTC1-201ENST00000315684 7021 ntAPPRIS P2 TSL 1 (best) BASIC9.67□□□□□ -0.86
UBE4BO95155 RAD9B-203ENST00000409246 2794 ntTSL 2 BASIC9.67□□□□□ -0.86
UBE4BO95155 DCP2-208ENST00000515408 8029 ntTSL 1 (best) BASIC9.67□□□□□ -0.86
UBE4BO95155 TMOD1-203ENST00000395211 3259 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
UBE4BO95155 GYG2-209ENST00000639373 2900 ntAPPRIS ALT2 TSL 1 (best) BASIC9.67□□□□□ -0.86
UBE4BO95155 RPS6-204ENST00000380394 1387 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
UBE4BO95155 TPP2-202ENST00000376065 3931 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
UBE4BO95155 UBE2D3-205ENST00000350435 711 ntTSL 2 BASIC9.67□□□□□ -0.86
UBE4BO95155 SNORD3G-201ENST00000362796 215 ntBASIC9.67□□□□□ -0.86
UBE4BO95155 GSTA5-202ENST00000370989 892 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
UBE4BO95155 CHCHD4P2-201ENST00000431135 420 ntBASIC9.67□□□□□ -0.86
UBE4BO95155 RN7SL420P-201ENST00000463843 298 ntBASIC9.67□□□□□ -0.86
UBE4BO95155 CASQ1-202ENST00000467691 595 ntTSL 3 BASIC9.67□□□□□ -0.86
UBE4BO95155 AC092943.1-201ENST00000485389 878 ntBASIC9.67□□□□□ -0.86
UBE4BO95155 IGKV1D-16-201ENST00000492446 378 ntAPPRIS P1 BASIC9.67□□□□□ -0.86
UBE4BO95155 ENPP7P1-201ENST00000509557 999 ntBASIC9.67□□□□□ -0.86
UBE4BO95155 GAPDHP35-201ENST00000513369 976 ntBASIC9.67□□□□□ -0.86
UBE4BO95155 LINC02222-201ENST00000513535 1039 ntTSL 4 BASIC9.67□□□□□ -0.86
UBE4BO95155 AC021546.1-201ENST00000518927 1031 ntTSL 3 BASIC9.67□□□□□ -0.86
UBE4BO95155 OSGEPL1-AS1-201ENST00000520651 508 ntTSL 2 BASIC9.67□□□□□ -0.86
UBE4BO95155 MRVI1-AS1-201ENST00000525578 829 ntTSL 3 BASIC9.67□□□□□ -0.86
UBE4BO95155 LMO3-222ENST00000540445 906 ntTSL 2 BASIC9.67□□□□□ -0.86
UBE4BO95155 AC138466.2-201ENST00000540993 304 ntBASIC9.67□□□□□ -0.86
UBE4BO95155 RAN-211ENST00000541679 572 ntTSL 5 BASIC9.67□□□□□ -0.86
UBE4BO95155 AC128707.1-202ENST00000548963 693 ntTSL 5 BASIC9.67□□□□□ -0.86
UBE4BO95155 AC102797.1-201ENST00000565127 545 ntTSL 4 BASIC9.67□□□□□ -0.86
UBE4BO95155 LINC02191-201ENST00000568036 518 ntTSL 4 BASIC9.67□□□□□ -0.86
UBE4BO95155 RN7SL198P-201ENST00000583190 258 ntBASIC9.67□□□□□ -0.86
UBE4BO95155 MIR4664-201ENST00000583819 71 ntBASIC9.67□□□□□ -0.86
UBE4BO95155 AC106037.1-201ENST00000584148 336 ntTSL 5 BASIC9.67□□□□□ -0.86
UBE4BO95155 SRGAP2D-201ENST00000605551 1021 ntBASIC9.67□□□□□ -0.86
UBE4BO95155 AC073862.2-201ENST00000625114 701 ntBASIC9.67□□□□□ -0.86
UBE4BO95155 ZNF185-204ENST00000370268 4305 ntAPPRIS P3 TSL 1 (best) BASIC9.67□□□□□ -0.86
UBE4BO95155 CDHR3-211ENST00000478080 2633 ntAPPRIS ALT2 TSL 2 BASIC9.67□□□□□ -0.86
UBE4BO95155 PPARG-209ENST00000397026 2029 ntTSL 5 BASIC9.67□□□□□ -0.86
UBE4BO95155 SP100-206ENST00000409897 2037 ntTSL 2 BASIC9.67□□□□□ -0.86
UBE4BO95155 FAT1-201ENST00000441802 14786 ntAPPRIS P2 TSL 5 BASIC9.67□□□□□ -0.86
UBE4BO95155 AKR1C4-202ENST00000380448 1414 ntAPPRIS P1 TSL 5 BASIC9.67□□□□□ -0.86
UBE4BO95155 FOXR2-201ENST00000339140 1926 ntAPPRIS P1 BASIC9.67□□□□□ -0.86
UBE4BO95155 ATXN7L1-202ENST00000419735 5417 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
UBE4BO95155 ACLY-202ENST00000353196 4318 ntAPPRIS ALT1 TSL 5 BASIC9.67□□□□□ -0.86
UBE4BO95155 NBPF19-204ENST00000611931 2051 ntTSL 5 BASIC9.67□□□□□ -0.86
UBE4BO95155 NBPF14-205ENST00000614329 2051 ntTSL 5 BASIC9.67□□□□□ -0.86
UBE4BO95155 NBPF26-205ENST00000615219 2051 ntTSL 5 BASIC9.67□□□□□ -0.86
UBE4BO95155 NBPF14-207ENST00000616120 2051 ntTSL 5 BASIC9.67□□□□□ -0.86
UBE4BO95155 NBPF12-207ENST00000617864 2051 ntTSL 5 BASIC9.67□□□□□ -0.86
UBE4BO95155 NBPF20-204ENST00000620821 2051 ntTSL 5 BASIC9.67□□□□□ -0.86
UBE4BO95155 UTP15-202ENST00000508491 1828 ntTSL 2 BASIC9.67□□□□□ -0.86
UBE4BO95155 RUNX1T1-248ENST00000613302 7687 ntAPPRIS P3 TSL 5 BASIC9.67□□□□□ -0.86
UBE4BO95155 AC016722.3-201ENST00000568862 2463 ntBASIC9.67□□□□□ -0.86
UBE4BO95155 MTA3-205ENST00000407270 2202 ntAPPRIS P2 TSL 1 (best) BASIC9.67□□□□□ -0.86
UBE4BO95155 ZNF611-206ENST00000595798 2395 ntTSL 1 (best) BASIC9.67□□□□□ -0.86
UBE4BO95155 LINC02210-213ENST00000591271 9678 ntTSL 3 BASIC9.66□□□□□ -0.86
UBE4BO95155 RACGAP1-209ENST00000547905 2190 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
UBE4BO95155 BRD7P2-201ENST00000466133 1944 ntBASIC9.66□□□□□ -0.86
UBE4BO95155 PRR11-201ENST00000262293 2332 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
UBE4BO95155 MARK3-203ENST00000335102 2331 ntTSL 5 BASIC9.66□□□□□ -0.86
UBE4BO95155 DBIL5P2-202ENST00000491724 1692 ntBASIC9.66□□□□□ -0.86
UBE4BO95155 CST9LP1-201ENST00000376987 444 ntBASIC9.66□□□□□ -0.86
UBE4BO95155 AC152007.1-201ENST00000428521 224 ntBASIC9.66□□□□□ -0.86
UBE4BO95155 ASS1P11-201ENST00000441309 1216 ntBASIC9.66□□□□□ -0.86
UBE4BO95155 MNX1-204ENST00000469500 209 ntTSL 1 (best) BASIC9.66□□□□□ -0.86
UBE4BO95155 MTND6P16-201ENST00000504006 520 ntBASIC9.66□□□□□ -0.86
UBE4BO95155 TMEM267-204ENST00000510130 721 ntTSL 3 BASIC9.66□□□□□ -0.86
UBE4BO95155 SRD5A3-AS1-202ENST00000510637 926 ntTSL 1 (best) BASIC9.66□□□□□ -0.86
UBE4BO95155 AC100849.2-201ENST00000518324 519 ntTSL 2 BASIC9.66□□□□□ -0.86
UBE4BO95155 IGLC5-201ENST00000519670 293 ntBASIC9.66□□□□□ -0.86
UBE4BO95155 ATOX1-202ENST00000520382 466 ntTSL 5 BASIC9.66□□□□□ -0.86
UBE4BO95155 ATOX1-205ENST00000522314 724 ntTSL 2 BASIC9.66□□□□□ -0.86
UBE4BO95155 OR5G1P-201ENST00000525221 946 ntBASIC9.66□□□□□ -0.86
UBE4BO95155 NPM1P50-201ENST00000532878 867 ntBASIC9.66□□□□□ -0.86
UBE4BO95155 AC087863.1-201ENST00000544515 570 ntTSL 4 BASIC9.66□□□□□ -0.86
UBE4BO95155 LINC01444-202ENST00000581211 654 ntTSL 3 BASIC9.66□□□□□ -0.86
UBE4BO95155 AL121830.1-203ENST00000598694 701 ntTSL 5 BASIC9.66□□□□□ -0.86
UBE4BO95155 AL356458.1-201ENST00000604764 465 ntBASIC9.66□□□□□ -0.86
UBE4BO95155 AP001425.1-202ENST00000605450 1063 ntBASIC9.66□□□□□ -0.86
UBE4BO95155 RN7SKP290-201ENST00000606842 195 ntBASIC9.66□□□□□ -0.86
UBE4BO95155 AC007663.4-201ENST00000608275 631 ntBASIC9.66□□□□□ -0.86
UBE4BO95155 AL139351.1-201ENST00000622092 320 ntBASIC9.66□□□□□ -0.86
Retrieved 100 of 98,524 protein–RNA pairs in 162.2 ms