Protein–RNA interactions for Protein: Q96RF0

SNX18, Sorting nexin-18, humanhuman

Predictions only

Length 628 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX18Q96RF0 RND3-203ENST00000409557 2372 ntTSL 1 (best) BASIC8.19□□□□□ -1.1
SNX18Q96RF0 FRMD6-202ENST00000356218 4768 ntAPPRIS P1 TSL 1 (best) BASIC8.19□□□□□ -1.1
SNX18Q96RF0 TADA2A-202ENST00000612272 1948 ntAPPRIS P1 TSL 2 BASIC8.19□□□□□ -1.1
SNX18Q96RF0 EXOC7-220ENST00000607838 3353 ntTSL 5 BASIC8.19□□□□□ -1.1
SNX18Q96RF0 ZNF512-202ENST00000379717 3417 ntAPPRIS ALT1 TSL 5 BASIC8.19□□□□□ -1.1
SNX18Q96RF0 ANTXR2-201ENST00000307333 1473 ntTSL 1 (best) BASIC8.19□□□□□ -1.1
SNX18Q96RF0 CCDC190-201ENST00000367910 1498 ntAPPRIS P2 TSL 2 BASIC8.19□□□□□ -1.1
SNX18Q96RF0 ABI1-205ENST00000376139 3516 ntAPPRIS P2 TSL 1 (best) BASIC8.19□□□□□ -1.1
SNX18Q96RF0 EFHC1-213ENST00000635996 2548 ntTSL 5 BASIC8.19□□□□□ -1.1
SNX18Q96RF0 SKAP1-201ENST00000336915 1534 ntAPPRIS P1 TSL 1 (best) BASIC8.19□□□□□ -1.1
SNX18Q96RF0 AC103764.1-201ENST00000505083 2096 ntTSL 2 BASIC8.18□□□□□ -1.1
SNX18Q96RF0 SYNE1-217ENST00000466159 2610 ntTSL 1 (best) BASIC8.18□□□□□ -1.1
SNX18Q96RF0 CORIN-208ENST00000508498 3200 ntAPPRIS ALT2 TSL 2 BASIC8.18□□□□□ -1.1
SNX18Q96RF0 WDR75-201ENST00000314761 2701 ntAPPRIS P1 TSL 1 (best) BASIC8.18□□□□□ -1.1
SNX18Q96RF0 SORL1-204ENST00000525532 3836 ntTSL 2 BASIC8.18□□□□□ -1.1
SNX18Q96RF0 CHD8-201ENST00000399982 8229 ntAPPRIS ALT2 TSL 1 (best) BASIC8.18□□□□□ -1.1
SNX18Q96RF0 AC018647.1-202ENST00000449644 1651 ntTSL 5 BASIC8.18□□□□□ -1.1
SNX18Q96RF0 TRPS1-212ENST00000640765 9514 ntTSL 2 BASIC8.18□□□□□ -1.1
SNX18Q96RF0 GDNF-AS1-203ENST00000514532 2913 ntTSL 1 (best) BASIC8.18□□□□□ -1.1
SNX18Q96RF0 CD36-209ENST00000435819 2365 ntAPPRIS P1 TSL 2 BASIC8.18□□□□□ -1.1
SNX18Q96RF0 RBM26-AS1-202ENST00000606049 2427 ntTSL 1 (best) BASIC8.18□□□□□ -1.1
SNX18Q96RF0 TANC1-201ENST00000263635 7470 ntAPPRIS P1 TSL 5 BASIC8.18□□□□□ -1.1
SNX18Q96RF0 ZNF525-203ENST00000475179 1868 ntTSL 2 BASIC8.18□□□□□ -1.1
SNX18Q96RF0 AL353625.1-201ENST00000569097 3131 ntBASIC8.18□□□□□ -1.1
SNX18Q96RF0 LRRC4-201ENST00000249363 3828 ntAPPRIS P1 TSL 1 (best) BASIC8.18□□□□□ -1.1
SNX18Q96RF0 OR8J3-201ENST00000301529 948 ntAPPRIS P1 BASIC8.18□□□□□ -1.1
SNX18Q96RF0 OSCP1-202ENST00000354267 767 ntTSL 5 BASIC8.18□□□□□ -1.1
SNX18Q96RF0 HBE1-202ENST00000380237 913 ntAPPRIS P1 TSL 1 (best) BASIC8.18□□□□□ -1.1
SNX18Q96RF0 MIR623-201ENST00000384986 98 ntBASIC8.18□□□□□ -1.1
SNX18Q96RF0 RGS10-203ENST00000392865 852 ntAPPRIS ALT2 TSL 1 (best) BASIC8.18□□□□□ -1.1
SNX18Q96RF0 WISP3-205ENST00000409166 953 ntTSL 1 (best) BASIC8.18□□□□□ -1.1
SNX18Q96RF0 AC104170.1-202ENST00000426017 362 ntTSL 3 BASIC8.18□□□□□ -1.1
SNX18Q96RF0 LINC00674-201ENST00000435469 678 ntTSL 3 BASIC8.18□□□□□ -1.1
SNX18Q96RF0 LLPHP2-201ENST00000436405 396 ntBASIC8.18□□□□□ -1.1
SNX18Q96RF0 IFNWP18-201ENST00000437472 591 ntBASIC8.18□□□□□ -1.1
SNX18Q96RF0 C4orf51-201ENST00000438731 932 ntAPPRIS P1 TSL 2 BASIC8.18□□□□□ -1.1
SNX18Q96RF0 AC002480.1-201ENST00000442252 1282 ntTSL 1 (best) BASIC8.18□□□□□ -1.1
SNX18Q96RF0 TCAIM-208ENST00000444602 1056 ntTSL 2 BASIC8.18□□□□□ -1.1
SNX18Q96RF0 AC245884.3-201ENST00000445491 218 ntBASIC8.18□□□□□ -1.1
SNX18Q96RF0 IFNWP9-201ENST00000448683 591 ntBASIC8.18□□□□□ -1.1
SNX18Q96RF0 AC017104.1-203ENST00000454416 466 ntTSL 3 BASIC8.18□□□□□ -1.1
SNX18Q96RF0 WWTR1-IT1-201ENST00000463167 451 ntTSL 5 BASIC8.18□□□□□ -1.1
SNX18Q96RF0 RN7SL653P-201ENST00000494134 293 ntBASIC8.18□□□□□ -1.1
SNX18Q96RF0 RN7SL78P-201ENST00000495193 281 ntBASIC8.18□□□□□ -1.1
SNX18Q96RF0 RPL29P22-201ENST00000498718 459 ntBASIC8.18□□□□□ -1.1
SNX18Q96RF0 AC133435.1-201ENST00000498753 576 ntBASIC8.18□□□□□ -1.1
SNX18Q96RF0 CASC9-201ENST00000504531 1164 ntTSL 1 (best) BASIC8.18□□□□□ -1.1
SNX18Q96RF0 LINC02213-201ENST00000504650 518 ntTSL 3 BASIC8.18□□□□□ -1.1
SNX18Q96RF0 AC110768.2-201ENST00000506540 329 ntBASIC8.18□□□□□ -1.1
SNX18Q96RF0 MEF2C-AS1-203ENST00000508718 483 ntTSL 4 BASIC8.18□□□□□ -1.1
SNX18Q96RF0 AC009800.1-201ENST00000511357 1006 ntBASIC8.18□□□□□ -1.1
SNX18Q96RF0 AC021242.2-202ENST00000522129 545 ntTSL 4 BASIC8.18□□□□□ -1.1
SNX18Q96RF0 AC021915.1-201ENST00000522541 824 ntTSL 1 (best) BASIC8.18□□□□□ -1.1
SNX18Q96RF0 AC116456.1-202ENST00000528151 597 ntTSL 4 BASIC8.18□□□□□ -1.1
SNX18Q96RF0 AC018716.1-201ENST00000534604 561 ntTSL 4 BASIC8.18□□□□□ -1.1
SNX18Q96RF0 AP003170.1-201ENST00000536944 1030 ntBASIC8.18□□□□□ -1.1
SNX18Q96RF0 AC027544.1-201ENST00000538408 433 ntBASIC8.18□□□□□ -1.1
SNX18Q96RF0 AC009248.1-201ENST00000548155 735 ntBASIC8.18□□□□□ -1.1
SNX18Q96RF0 MEG8-208ENST00000553465 1176 ntTSL 5 BASIC8.18□□□□□ -1.1
SNX18Q96RF0 AC015871.1-201ENST00000557880 1081 ntBASIC8.18□□□□□ -1.1
SNX18Q96RF0 AC009996.1-201ENST00000558006 653 ntTSL 5 BASIC8.18□□□□□ -1.1
SNX18Q96RF0 LINC01852-202ENST00000559232 533 ntTSL 4 BASIC8.18□□□□□ -1.1
SNX18Q96RF0 AC051619.5-203ENST00000561404 529 ntTSL 4 BASIC8.18□□□□□ -1.1
SNX18Q96RF0 AC010761.2-201ENST00000584779 442 ntTSL 5 BASIC8.18□□□□□ -1.1
SNX18Q96RF0 ZNF615-206ENST00000597747 704 ntTSL 5 BASIC8.18□□□□□ -1.1
SNX18Q96RF0 AC010978.1-206ENST00000598281 828 ntTSL 5 BASIC8.18□□□□□ -1.1
SNX18Q96RF0 AC120349.1-201ENST00000599498 282 ntTSL 5 BASIC8.18□□□□□ -1.1
SNX18Q96RF0 Z98884.2-201ENST00000602406 393 ntBASIC8.18□□□□□ -1.1
SNX18Q96RF0 AC055822.1-201ENST00000606067 445 ntBASIC8.18□□□□□ -1.1
SNX18Q96RF0 PLS3-AS1-201ENST00000606397 521 ntTSL 4 BASIC8.18□□□□□ -1.1
SNX18Q96RF0 AC005291.2-201ENST00000609088 523 ntTSL 4 BASIC8.18□□□□□ -1.1
SNX18Q96RF0 AC002470.1-201ENST00000610278 395 ntBASIC8.18□□□□□ -1.1
SNX18Q96RF0 GOLGA6L17P-201ENST00000611297 586 ntTSL 4 BASIC8.18□□□□□ -1.1
SNX18Q96RF0 Metazoa_SRP.148-201ENST00000614489 291 ntBASIC8.18□□□□□ -1.1
SNX18Q96RF0 BX510359.8-201ENST00000617713 296 ntBASIC8.18□□□□□ -1.1
SNX18Q96RF0 AC244153.1-201ENST00000617990 702 ntTSL 2 BASIC8.18□□□□□ -1.1
SNX18Q96RF0 AC009152.1-201ENST00000618290 556 ntBASIC8.18□□□□□ -1.1
SNX18Q96RF0 AC004241.4-201ENST00000622792 1120 ntBASIC8.18□□□□□ -1.1
SNX18Q96RF0 AC073862.2-201ENST00000625114 701 ntBASIC8.18□□□□□ -1.1
SNX18Q96RF0 C2-AS1-201ENST00000630806 762 ntTSL 2 BASIC8.18□□□□□ -1.1
SNX18Q96RF0 C1orf132-204ENST00000637970 1170 ntTSL 5 BASIC8.18□□□□□ -1.1
SNX18Q96RF0 AC247036.7-201ENST00000639643 304 ntBASIC8.18□□□□□ -1.1
SNX18Q96RF0 FMOD-201ENST00000354955 3310 ntAPPRIS P1 TSL 1 (best) BASIC8.18□□□□□ -1.1
SNX18Q96RF0 HGD-201ENST00000283871 2005 ntAPPRIS P1 TSL 1 (best) BASIC8.18□□□□□ -1.1
SNX18Q96RF0 GBP5-201ENST00000370459 2011 ntAPPRIS P1 TSL 5 BASIC8.18□□□□□ -1.1
SNX18Q96RF0 PSD3-203ENST00000428502 6330 ntTSL 1 (best) BASIC8.18□□□□□ -1.1
SNX18Q96RF0 LINC02150-201ENST00000513157 2120 ntTSL 5 BASIC8.18□□□□□ -1.1
SNX18Q96RF0 LINC00927-203ENST00000558913 2878 ntTSL 1 (best) BASIC8.18□□□□□ -1.1
SNX18Q96RF0 AP003025.2-202ENST00000414466 4335 ntTSL 2 BASIC8.18□□□□□ -1.1
SNX18Q96RF0 PBLD-202ENST00000309049 2165 ntAPPRIS P1 TSL 1 (best) BASIC8.18□□□□□ -1.1
SNX18Q96RF0 EXOSC9-201ENST00000243498 1481 ntAPPRIS P1 TSL 1 (best) BASIC8.18□□□□□ -1.1
SNX18Q96RF0 OR3A4P-202ENST00000624752 1461 ntBASIC8.18□□□□□ -1.1
SNX18Q96RF0 KIAA1024-201ENST00000305428 6732 ntAPPRIS P1 TSL 1 (best) BASIC8.18□□□□□ -1.1
SNX18Q96RF0 SSBP2-205ENST00000505980 1521 ntTSL 2 BASIC8.18□□□□□ -1.1
SNX18Q96RF0 C11orf88-203ENST00000529167 3099 ntAPPRIS ALT2 TSL 2 BASIC8.18□□□□□ -1.1
SNX18Q96RF0 ZNF157-201ENST00000377073 2318 ntAPPRIS P1 TSL 1 (best) BASIC8.18□□□□□ -1.1
SNX18Q96RF0 SERPINC1-201ENST00000367698 1594 ntAPPRIS P1 TSL 1 (best) BASIC8.18□□□□□ -1.1
SNX18Q96RF0 CNPY1-201ENST00000321736 2378 ntTSL 1 (best) BASIC8.18□□□□□ -1.1
SNX18Q96RF0 FAM47C-201ENST00000358047 3270 ntAPPRIS P1 BASIC8.18□□□□□ -1.1
SNX18Q96RF0 ZNF383-208ENST00000590503 1673 ntAPPRIS P1 TSL 5 BASIC8.18□□□□□ -1.1
Retrieved 100 of 98,524 protein–RNA pairs in 61.5 ms