Protein–RNA interactions for Protein: Q6PIF2

SYCE2, Synaptonemal complex central element protein 2, humanhuman

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYCE2Q6PIF2 SAA2-202ENST00000414546 1022 ntTSL 1 (best) BASIC9.37□□□□□ -0.91
SYCE2Q6PIF2 RPL36P2-201ENST00000426026 315 ntBASIC9.37□□□□□ -0.91
SYCE2Q6PIF2 GYG1P2-201ENST00000426437 1006 ntBASIC9.37□□□□□ -0.91
SYCE2Q6PIF2 Z74696.1-201ENST00000428208 1123 ntBASIC9.37□□□□□ -0.91
SYCE2Q6PIF2 EIF3IP1-201ENST00000433048 967 ntBASIC9.37□□□□□ -0.91
SYCE2Q6PIF2 SEZ6-204ENST00000442608 3805 ntAPPRIS ALT2 TSL 5 BASIC9.37□□□□□ -0.91
SYCE2Q6PIF2 AL391883.1-201ENST00000454736 447 ntTSL 2 BASIC9.37□□□□□ -0.91
SYCE2Q6PIF2 AC017007.3-201ENST00000479865 435 ntBASIC9.37□□□□□ -0.91
SYCE2Q6PIF2 LEF1-AS1-205ENST00000508286 444 ntTSL 2 BASIC9.37□□□□□ -0.91
SYCE2Q6PIF2 SDHC-208ENST00000513009 369 ntTSL 1 (best) BASIC9.37□□□□□ -0.91
SYCE2Q6PIF2 AC027698.1-201ENST00000518536 625 ntTSL 3 BASIC9.37□□□□□ -0.91
SYCE2Q6PIF2 LINC01499-202ENST00000529282 563 ntTSL 4 BASIC9.37□□□□□ -0.91
SYCE2Q6PIF2 AP000873.3-201ENST00000531869 766 ntTSL 5 BASIC9.37□□□□□ -0.91
SYCE2Q6PIF2 SAA1-203ENST00000532858 583 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
SYCE2Q6PIF2 AC020612.1-201ENST00000547655 541 ntBASIC9.37□□□□□ -0.91
SYCE2Q6PIF2 NUPL2-212ENST00000548367 249 ntTSL 5 BASIC9.37□□□□□ -0.91
SYCE2Q6PIF2 AC027013.1-201ENST00000554412 1057 ntTSL 2 BASIC9.37□□□□□ -0.91
SYCE2Q6PIF2 FAM222B-214ENST00000583953 564 ntTSL 4 BASIC9.37□□□□□ -0.91
SYCE2Q6PIF2 ZNF611-214ENST00000600943 560 ntTSL 4 BASIC9.37□□□□□ -0.91
SYCE2Q6PIF2 AC090950.1-201ENST00000604625 830 ntBASIC9.37□□□□□ -0.91
SYCE2Q6PIF2 RBM22P6-201ENST00000611682 867 ntBASIC9.37□□□□□ -0.91
SYCE2Q6PIF2 AC239803.3-201ENST00000614663 494 ntTSL 3 BASIC9.37□□□□□ -0.91
SYCE2Q6PIF2 LINC01176-202ENST00000628121 716 ntTSL 3 BASIC9.37□□□□□ -0.91
SYCE2Q6PIF2 LINC00595-215ENST00000635422 651 ntTSL 5 BASIC9.37□□□□□ -0.91
SYCE2Q6PIF2 MOCOS-201ENST00000261326 6160 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
SYCE2Q6PIF2 SLC11A2-212ENST00000547688 2401 ntAPPRIS ALT2 TSL 5 BASIC9.37□□□□□ -0.91
SYCE2Q6PIF2 ZNF226-215ENST00000590089 2788 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
SYCE2Q6PIF2 S100A7A-203ENST00000368729 4279 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
SYCE2Q6PIF2 CD164-203ENST00000324953 2936 ntTSL 1 (best) BASIC9.37□□□□□ -0.91
SYCE2Q6PIF2 ZNF236-201ENST00000253159 8124 ntAPPRIS P3 TSL 1 (best) BASIC9.37□□□□□ -0.91
SYCE2Q6PIF2 LARS2-203ENST00000415258 4744 ntAPPRIS P1 TSL 5 BASIC9.37□□□□□ -0.91
SYCE2Q6PIF2 ALG9-210ENST00000531154 1930 ntTSL 2 BASIC9.37□□□□□ -0.91
SYCE2Q6PIF2 USP3-208ENST00000558285 1742 ntTSL 1 (best) BASIC9.36□□□□□ -0.91
SYCE2Q6PIF2 MFAP3L-202ENST00000393702 1505 ntTSL 1 (best) BASIC9.36□□□□□ -0.91
SYCE2Q6PIF2 KBTBD11-OT1-204ENST00000635855 6169 ntAPPRIS P5 TSL 5 BASIC9.36□□□□□ -0.91
SYCE2Q6PIF2 ABCG1-204ENST00000398437 3475 ntTSL 1 (best) BASIC9.36□□□□□ -0.91
SYCE2Q6PIF2 ZSCAN16-201ENST00000340487 1328 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
SYCE2Q6PIF2 ELOVL2-201ENST00000354666 3997 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
SYCE2Q6PIF2 ZSCAN26-206ENST00000619937 2729 ntAPPRIS ALT1 TSL 2 BASIC9.36□□□□□ -0.91
SYCE2Q6PIF2 CD109-202ENST00000422508 9221 ntAPPRIS ALT1 TSL 1 (best) BASIC9.36□□□□□ -0.91
SYCE2Q6PIF2 KANSL3-206ENST00000431828 5153 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
SYCE2Q6PIF2 CAMK2D-213ENST00000514328 1497 ntTSL 5 BASIC9.36□□□□□ -0.91
SYCE2Q6PIF2 SUN1-205ENST00000405266 4062 ntTSL 5 BASIC9.36□□□□□ -0.91
SYCE2Q6PIF2 MSL3-201ENST00000312196 2345 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
SYCE2Q6PIF2 BUB1-201ENST00000302759 3507 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
SYCE2Q6PIF2 PMS2CL-204ENST00000486256 3327 ntTSL 1 (best) BASIC9.36□□□□□ -0.91
SYCE2Q6PIF2 VPREB1-201ENST00000302273 626 ntAPPRIS ALT2 TSL 3 BASIC9.36□□□□□ -0.91
SYCE2Q6PIF2 UPF3AP1-201ENST00000413731 1126 ntBASIC9.36□□□□□ -0.91
SYCE2Q6PIF2 CLCN3P1-201ENST00000423965 1017 ntBASIC9.36□□□□□ -0.91
SYCE2Q6PIF2 CDH13-203ENST00000431540 831 ntTSL 1 (best) BASIC9.36□□□□□ -0.91
SYCE2Q6PIF2 AL355478.1-201ENST00000431686 821 ntTSL 5 BASIC9.36□□□□□ -0.91
SYCE2Q6PIF2 CFL1P8-201ENST00000436148 475 ntBASIC9.36□□□□□ -0.91
SYCE2Q6PIF2 AC239367.1-201ENST00000439389 936 ntBASIC9.36□□□□□ -0.91
SYCE2Q6PIF2 AL365436.1-201ENST00000452587 495 ntBASIC9.36□□□□□ -0.91
SYCE2Q6PIF2 SEPHS1P7-201ENST00000452995 1177 ntBASIC9.36□□□□□ -0.91
SYCE2Q6PIF2 AC004448.4-203ENST00000456537 441 ntTSL 3 BASIC9.36□□□□□ -0.91
SYCE2Q6PIF2 RN7SL368P-201ENST00000473384 277 ntBASIC9.36□□□□□ -0.91
SYCE2Q6PIF2 GAPDHP44-201ENST00000513513 1007 ntBASIC9.36□□□□□ -0.91
SYCE2Q6PIF2 CHCHD7-205ENST00000517933 580 ntAPPRIS P1 TSL 4 BASIC9.36□□□□□ -0.91
SYCE2Q6PIF2 CHCHD7-215ENST00000523061 557 ntTSL 3 BASIC9.36□□□□□ -0.91
SYCE2Q6PIF2 AC010768.2-201ENST00000532524 567 ntTSL 4 BASIC9.36□□□□□ -0.91
SYCE2Q6PIF2 ACYP1-204ENST00000555135 639 ntTSL 3 BASIC9.36□□□□□ -0.91
SYCE2Q6PIF2 AC078905.1-201ENST00000560803 509 ntTSL 3 BASIC9.36□□□□□ -0.91
SYCE2Q6PIF2 AL023284.4-201ENST00000564248 374 ntBASIC9.36□□□□□ -0.91
SYCE2Q6PIF2 CDH13-207ENST00000565636 810 ntTSL 5 BASIC9.36□□□□□ -0.91
SYCE2Q6PIF2 OR4C45-201ENST00000568934 921 ntAPPRIS P1 BASIC9.36□□□□□ -0.91
SYCE2Q6PIF2 SNURF-202ENST00000577949 650 ntAPPRIS P1 TSL 2 BASIC9.36□□□□□ -0.91
SYCE2Q6PIF2 AF186192.2-204ENST00000581667 524 ntBASIC9.36□□□□□ -0.91
SYCE2Q6PIF2 ZNF615-206ENST00000597747 704 ntTSL 5 BASIC9.36□□□□□ -0.91
SYCE2Q6PIF2 RN7SL760P-201ENST00000607344 270 ntBASIC9.36□□□□□ -0.91
SYCE2Q6PIF2 AC026333.4-201ENST00000613543 544 ntBASIC9.36□□□□□ -0.91
SYCE2Q6PIF2 AL354809.1-202ENST00000614005 640 ntTSL 3 BASIC9.36□□□□□ -0.91
SYCE2Q6PIF2 AL354809.1-201ENST00000618106 716 ntTSL 3 BASIC9.36□□□□□ -0.91
SYCE2Q6PIF2 MIR3191-201ENST00000636300 76 ntBASIC9.36□□□□□ -0.91
SYCE2Q6PIF2 AC105233.5-202ENST00000642083 4132 ntBASIC9.36□□□□□ -0.91
SYCE2Q6PIF2 AC012409.5-201ENST00000624746 3424 ntBASIC9.36□□□□□ -0.91
SYCE2Q6PIF2 SEC24C-202ENST00000345254 4433 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
SYCE2Q6PIF2 PARP14-202ENST00000474629 7915 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
SYCE2Q6PIF2 AC024600.1-201ENST00000425902 2572 ntTSL 1 (best) BASIC9.36□□□□□ -0.91
SYCE2Q6PIF2 NAP1L3-202ENST00000475430 2555 ntAPPRIS ALT2 TSL 2 BASIC9.36□□□□□ -0.91
SYCE2Q6PIF2 AKAP4-202ENST00000376064 2864 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
SYCE2Q6PIF2 OSBPL6-204ENST00000359685 7114 ntTSL 5 BASIC9.36□□□□□ -0.91
SYCE2Q6PIF2 AL132796.2-201ENST00000554025 1851 ntTSL 5 BASIC9.36□□□□□ -0.91
SYCE2Q6PIF2 KCNA2-211ENST00000639233 5256 ntTSL 5 BASIC9.36□□□□□ -0.91
SYCE2Q6PIF2 VIL1-201ENST00000248444 6531 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
SYCE2Q6PIF2 ZNF610-203ENST00000403906 2191 ntAPPRIS P3 TSL 1 (best) BASIC9.36□□□□□ -0.91
SYCE2Q6PIF2 SSBP3-AS1-201ENST00000361350 2624 ntBASIC9.35□□□□□ -0.91
SYCE2Q6PIF2 MORF4L2-203ENST00000422154 1983 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
SYCE2Q6PIF2 FREM1-202ENST00000380880 7324 ntAPPRIS P1 TSL 5 BASIC9.35□□□□□ -0.91
SYCE2Q6PIF2 C17orf80-205ENST00000535032 2129 ntAPPRIS P3 TSL 1 (best) BASIC9.35□□□□□ -0.91
SYCE2Q6PIF2 CCR6-203ENST00000400926 3216 ntAPPRIS P1 TSL 2 BASIC9.35□□□□□ -0.91
SYCE2Q6PIF2 SMIM8-201ENST00000229570 2405 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
SYCE2Q6PIF2 CHODL-204ENST00000400128 2421 ntTSL 2 BASIC9.35□□□□□ -0.91
SYCE2Q6PIF2 ABCB4-206ENST00000453593 3699 ntTSL 5 BASIC9.35□□□□□ -0.91
SYCE2Q6PIF2 NOL10-202ENST00000381685 2589 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
SYCE2Q6PIF2 LINC01949-201ENST00000445770 2721 ntTSL 1 (best) BASIC9.35□□□□□ -0.91
SYCE2Q6PIF2 ADNP-204ENST00000396032 4581 ntAPPRIS P1 TSL 2 BASIC9.35□□□□□ -0.91
SYCE2Q6PIF2 LINC01140-201ENST00000461990 3181 ntTSL 1 (best) BASIC9.35□□□□□ -0.91
SYCE2Q6PIF2 TUBB1-201ENST00000217133 3496 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
SYCE2Q6PIF2 PIN4-201ENST00000218432 1780 ntTSL 2 BASIC9.35□□□□□ -0.91
Retrieved 100 of 98,524 protein–RNA pairs in 56.7 ms