Protein–RNA interactions for Protein: Q8TAP4

LMO3, LIM domain only protein 3, humanhuman

Predictions only

Length 145 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3Q8TAP4 RN7SKP45-201ENST00000363509 304 ntBASIC9.42□□□□□ -0.9
LMO3Q8TAP4 CNST-201ENST00000366511 645 ntTSL 3 BASIC9.42□□□□□ -0.9
LMO3Q8TAP4 CENPW-201ENST00000368325 528 ntTSL 3 BASIC9.42□□□□□ -0.9
LMO3Q8TAP4 EGFLAM-205ENST00000397210 1299 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
LMO3Q8TAP4 RN7SKP112-201ENST00000411213 318 ntBASIC9.42□□□□□ -0.9
LMO3Q8TAP4 RMDN2-AS1-201ENST00000414365 859 ntTSL 4 BASIC9.42□□□□□ -0.9
LMO3Q8TAP4 MAGEB6P1-201ENST00000416929 1224 ntAPPRIS P1 BASIC9.42□□□□□ -0.9
LMO3Q8TAP4 PAICSP3-201ENST00000428007 1168 ntBASIC9.42□□□□□ -0.9
LMO3Q8TAP4 AL139220.2-213ENST00000431800 674 ntTSL 3 BASIC9.42□□□□□ -0.9
LMO3Q8TAP4 RPL23AP96-201ENST00000514593 591 ntBASIC9.42□□□□□ -0.9
LMO3Q8TAP4 AC009652.1-201ENST00000528326 648 ntTSL 5 BASIC9.42□□□□□ -0.9
LMO3Q8TAP4 AP001360.1-201ENST00000534055 518 ntTSL 2 BASIC9.42□□□□□ -0.9
LMO3Q8TAP4 BANF2-205ENST00000545418 360 ntTSL 3 BASIC9.42□□□□□ -0.9
LMO3Q8TAP4 OR7E159P-201ENST00000553761 298 ntBASIC9.42□□□□□ -0.9
LMO3Q8TAP4 AC137527.1-201ENST00000565839 1261 ntBASIC9.42□□□□□ -0.9
LMO3Q8TAP4 AC120045.1-202ENST00000567770 1068 ntBASIC9.42□□□□□ -0.9
LMO3Q8TAP4 LINC01444-202ENST00000581211 654 ntTSL 3 BASIC9.42□□□□□ -0.9
LMO3Q8TAP4 ZNF85-208ENST00000597314 563 ntTSL 4 BASIC9.42□□□□□ -0.9
LMO3Q8TAP4 AL133351.4-201ENST00000604204 631 ntBASIC9.42□□□□□ -0.9
LMO3Q8TAP4 RN7SL796P-201ENST00000613991 291 ntBASIC9.42□□□□□ -0.9
LMO3Q8TAP4 LINC02028-221ENST00000622169 621 ntTSL 5 BASIC9.42□□□□□ -0.9
LMO3Q8TAP4 AC011472.5-201ENST00000624079 508 ntBASIC9.42□□□□□ -0.9
LMO3Q8TAP4 ADD3-AS1-203ENST00000625954 472 ntTSL 3 BASIC9.42□□□□□ -0.9
LMO3Q8TAP4 AC009053.1-202ENST00000563377 2051 ntBASIC9.42□□□□□ -0.9
LMO3Q8TAP4 HELQ-201ENST00000295488 3579 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
LMO3Q8TAP4 SHTN1-207ENST00000615301 6730 ntAPPRIS P3 TSL 1 (best) BASIC9.42□□□□□ -0.9
LMO3Q8TAP4 AP003352.1-201ENST00000501016 1989 ntTSL 5 BASIC9.42□□□□□ -0.9
LMO3Q8TAP4 PTK2-203ENST00000430260 1940 ntTSL 2 BASIC9.42□□□□□ -0.9
LMO3Q8TAP4 FBN2-204ENST00000508053 11132 ntAPPRIS P1 TSL 5 BASIC9.42□□□□□ -0.9
LMO3Q8TAP4 LGALS8-202ENST00000323938 1855 ntTSL 5 BASIC9.42□□□□□ -0.9
LMO3Q8TAP4 SORCS1-203ENST00000369698 2638 ntTSL 5 BASIC9.42□□□□□ -0.9
LMO3Q8TAP4 MLANA-203ENST00000381477 2415 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
LMO3Q8TAP4 PREPL-204ENST00000409272 3030 ntAPPRIS P1 TSL 2 BASIC9.42□□□□□ -0.9
LMO3Q8TAP4 GBAP1-202ENST00000459805 2922 ntTSL 5 BASIC9.42□□□□□ -0.9
LMO3Q8TAP4 MYO9A-201ENST00000356056 12411 ntAPPRIS P2 TSL 1 (best) BASIC9.41□□□□□ -0.9
LMO3Q8TAP4 ACTR3C-206ENST00000613959 5142 ntBASIC9.41□□□□□ -0.9
LMO3Q8TAP4 NLRP1-210ENST00000572272 4422 ntAPPRIS P4 TSL 1 (best) BASIC9.41□□□□□ -0.9
LMO3Q8TAP4 IL15-202ENST00000320650 1447 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
LMO3Q8TAP4 C1orf116-202ENST00000461135 3142 ntTSL 2 BASIC9.41□□□□□ -0.9
LMO3Q8TAP4 MYRFL-205ENST00000552032 3139 ntAPPRIS P2 TSL 5 BASIC9.41□□□□□ -0.9
LMO3Q8TAP4 ARHGAP19-201ENST00000358308 5390 ntTSL 1 (best) BASIC9.41□□□□□ -0.9
LMO3Q8TAP4 ARHGAP32-206ENST00000527272 5289 ntTSL 1 (best) BASIC9.41□□□□□ -0.9
LMO3Q8TAP4 TENM2-207ENST00000520394 8034 ntTSL 1 (best) BASIC9.41□□□□□ -0.9
LMO3Q8TAP4 CNDP1-203ENST00000582365 4111 ntAPPRIS ALT2 TSL 5 BASIC9.41□□□□□ -0.9
LMO3Q8TAP4 ZSCAN30-201ENST00000333206 4097 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
LMO3Q8TAP4 XPO1-203ENST00000406957 3479 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
LMO3Q8TAP4 SERPINA9-203ENST00000380365 1333 ntAPPRIS P1 TSL 5 BASIC9.41□□□□□ -0.9
LMO3Q8TAP4 MORN5-201ENST00000373764 705 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
LMO3Q8TAP4 CLLU1OS-201ENST00000378487 686 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
LMO3Q8TAP4 U3.33-201ENST00000408117 204 ntBASIC9.41□□□□□ -0.9
LMO3Q8TAP4 MRPL48-204ENST00000411840 1197 ntTSL 1 (best) BASIC9.41□□□□□ -0.9
LMO3Q8TAP4 AL049734.1-201ENST00000422384 608 ntBASIC9.41□□□□□ -0.9
LMO3Q8TAP4 RPL36P2-201ENST00000426026 315 ntBASIC9.41□□□□□ -0.9
LMO3Q8TAP4 TTC4P1-201ENST00000427137 1158 ntBASIC9.41□□□□□ -0.9
LMO3Q8TAP4 DSCR10-201ENST00000432141 860 ntTSL 3 BASIC9.41□□□□□ -0.9
LMO3Q8TAP4 WBP1LP7-201ENST00000437905 363 ntBASIC9.41□□□□□ -0.9
LMO3Q8TAP4 PCBP1-AS1-233ENST00000442326 668 ntTSL 3 BASIC9.41□□□□□ -0.9
LMO3Q8TAP4 PGA5-202ENST00000451616 971 ntTSL 2 BASIC9.41□□□□□ -0.9
LMO3Q8TAP4 RN7SL798P-201ENST00000468562 301 ntBASIC9.41□□□□□ -0.9
LMO3Q8TAP4 AP001318.1-201ENST00000476981 321 ntBASIC9.41□□□□□ -0.9
LMO3Q8TAP4 PAX8-211ENST00000497038 816 ntTSL 5 BASIC9.41□□□□□ -0.9
LMO3Q8TAP4 AC064807.3-201ENST00000523810 470 ntTSL 2 BASIC9.41□□□□□ -0.9
LMO3Q8TAP4 SLA-223ENST00000524345 1003 ntTSL 2 BASIC9.41□□□□□ -0.9
LMO3Q8TAP4 AC024901.1-201ENST00000535764 718 ntTSL 3 BASIC9.41□□□□□ -0.9
LMO3Q8TAP4 NBPF5P-202ENST00000545941 1032 ntBASIC9.41□□□□□ -0.9
LMO3Q8TAP4 PRSS58-201ENST00000547058 913 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
LMO3Q8TAP4 AC005871.2-201ENST00000549104 526 ntTSL 4 BASIC9.41□□□□□ -0.9
LMO3Q8TAP4 NPC2-209ENST00000557510 1029 ntTSL 1 (best) BASIC9.41□□□□□ -0.9
LMO3Q8TAP4 AC018554.2-201ENST00000563482 261 ntBASIC9.41□□□□□ -0.9
LMO3Q8TAP4 ZEB2P1-202ENST00000572816 902 ntTSL 5 BASIC9.41□□□□□ -0.9
LMO3Q8TAP4 AC011465.1-201ENST00000599092 328 ntTSL 3 BASIC9.41□□□□□ -0.9
LMO3Q8TAP4 HDAC1P2-202ENST00000602936 807 ntBASIC9.41□□□□□ -0.9
LMO3Q8TAP4 ZNF30-AS1-201ENST00000604333 625 ntTSL 3 BASIC9.41□□□□□ -0.9
LMO3Q8TAP4 AC215522.1-201ENST00000615488 446 ntBASIC9.41□□□□□ -0.9
LMO3Q8TAP4 CCL4L2-218ENST00000620576 652 ntTSL 1 (best) BASIC9.41□□□□□ -0.9
LMO3Q8TAP4 OR12D2-206ENST00000623183 1069 ntAPPRIS P1 BASIC9.41□□□□□ -0.9
LMO3Q8TAP4 LINC01727-202ENST00000623256 1218 ntTSL 4 BASIC9.41□□□□□ -0.9
LMO3Q8TAP4 FAM238C-205ENST00000640641 391 ntBASIC9.41□□□□□ -0.9
LMO3Q8TAP4 GRB10-204ENST00000398812 4705 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
LMO3Q8TAP4 DCLRE1C-205ENST00000378249 2246 ntTSL 1 (best) BASIC9.41□□□□□ -0.9
LMO3Q8TAP4 MTF2-201ENST00000370298 4125 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
LMO3Q8TAP4 AC006030.1-201ENST00000451608 5059 ntAPPRIS P1 TSL 5 BASIC9.41□□□□□ -0.9
LMO3Q8TAP4 FCGR3B-202ENST00000367964 2143 ntAPPRIS P1 TSL 5 BASIC9.41□□□□□ -0.9
LMO3Q8TAP4 NTNG2-201ENST00000372179 3984 ntTSL 5 BASIC9.41□□□□□ -0.9
LMO3Q8TAP4 MAP7D3-203ENST00000370661 4365 ntAPPRIS ALT2 TSL 1 (best) BASIC9.41□□□□□ -0.9
LMO3Q8TAP4 FRMD6-201ENST00000344768 2972 ntTSL 2 BASIC9.41□□□□□ -0.9
LMO3Q8TAP4 EP400NL-208ENST00000475841 7090 ntTSL 2 BASIC9.41□□□□□ -0.9
LMO3Q8TAP4 AC022486.1-201ENST00000510613 1483 ntTSL 5 BASIC9.4□□□□□ -0.9
LMO3Q8TAP4 NR1H4-209ENST00000551379 1489 ntAPPRIS ALT1 TSL 1 (best) BASIC9.4□□□□□ -0.9
LMO3Q8TAP4 COL28A1-201ENST00000399429 4277 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
LMO3Q8TAP4 NUDT13-201ENST00000349051 1835 ntTSL 1 (best) BASIC9.4□□□□□ -0.9
LMO3Q8TAP4 INHBA-AS1-201ENST00000415848 3005 ntTSL 1 (best) BASIC9.4□□□□□ -0.9
LMO3Q8TAP4 CTNND2-205ENST00000503622 2982 ntTSL 2 BASIC9.4□□□□□ -0.9
LMO3Q8TAP4 TRIM6-203ENST00000380107 2590 ntTSL 1 (best) BASIC9.4□□□□□ -0.9
LMO3Q8TAP4 VNN3-212ENST00000519686 1377 ntTSL 1 (best) BASIC9.4□□□□□ -0.9
LMO3Q8TAP4 AMOTL1-202ENST00000317829 8844 ntTSL 1 (best) BASIC9.4□□□□□ -0.9
LMO3Q8TAP4 DTL-206ENST00000542077 4471 ntTSL 2 BASIC9.4□□□□□ -0.9
LMO3Q8TAP4 UPF2-202ENST00000357604 5193 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
LMO3Q8TAP4 MYO1A-201ENST00000300119 3621 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
LMO3Q8TAP4 PDZK1-201ENST00000344770 2084 ntAPPRIS P1 TSL 5 BASIC9.4□□□□□ -0.9
Retrieved 100 of 98,524 protein–RNA pairs in 60.2 ms