Protein–RNA interactions for Protein: P43005

SLC1A1, Excitatory amino acid transporter 3, humanhuman

Predictions only

Length 524 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC1A1P43005 TTC32-201ENST00000333610 822 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
SLC1A1P43005 BTG4-201ENST00000356018 1018 ntAPPRIS P1 TSL 5 BASIC9.29□□□□□ -0.92
SLC1A1P43005 SRSF10-206ENST00000374453 866 ntTSL 5 BASIC9.29□□□□□ -0.92
SLC1A1P43005 APOO-201ENST00000379226 1118 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
SLC1A1P43005 U3.18-201ENST00000390880 216 ntBASIC9.29□□□□□ -0.92
SLC1A1P43005 RGS10-203ENST00000392865 852 ntAPPRIS ALT2 TSL 1 (best) BASIC9.29□□□□□ -0.92
SLC1A1P43005 LINC00525-201ENST00000412730 1188 ntTSL 1 (best) BASIC9.29□□□□□ -0.92
SLC1A1P43005 TTC4P1-201ENST00000427137 1158 ntBASIC9.29□□□□□ -0.92
SLC1A1P43005 AL359921.1-201ENST00000433131 494 ntTSL 3 BASIC9.29□□□□□ -0.92
SLC1A1P43005 HCG25-220ENST00000450514 759 ntTSL 3 BASIC9.29□□□□□ -0.92
SLC1A1P43005 AC104619.1-201ENST00000459634 631 ntBASIC9.29□□□□□ -0.92
SLC1A1P43005 CTLA4-204ENST00000472206 277 ntTSL 1 (best) BASIC9.29□□□□□ -0.92
SLC1A1P43005 RPL22-207ENST00000484532 449 ntTSL 2 BASIC9.29□□□□□ -0.92
SLC1A1P43005 SDR16C6P-202ENST00000524136 955 ntBASIC9.29□□□□□ -0.92
SLC1A1P43005 CACNA1C-AS2-201ENST00000545526 609 ntTSL 2 BASIC9.29□□□□□ -0.92
SLC1A1P43005 RN7SL731P-201ENST00000584329 293 ntBASIC9.29□□□□□ -0.92
SLC1A1P43005 TSPAN16-205ENST00000592955 927 ntTSL 3 BASIC9.29□□□□□ -0.92
SLC1A1P43005 AC018638.6-201ENST00000605007 1267 ntBASIC9.29□□□□□ -0.92
SLC1A1P43005 Metazoa_SRP.126-201ENST00000618354 266 ntBASIC9.29□□□□□ -0.92
SLC1A1P43005 MIR6877-201ENST00000620452 64 ntBASIC9.29□□□□□ -0.92
SLC1A1P43005 RDM1-229ENST00000639942 420 ntTSL 5 BASIC9.29□□□□□ -0.92
SLC1A1P43005 TTC28-208ENST00000612946 11274 ntAPPRIS ALT2 TSL 5 BASIC9.29□□□□□ -0.92
SLC1A1P43005 AC008543.1-201ENST00000344893 3383 ntTSL 2 BASIC9.29□□□□□ -0.92
SLC1A1P43005 FAM193A-203ENST00000502458 4083 ntAPPRIS ALT2 TSL 1 (best) BASIC9.29□□□□□ -0.92
SLC1A1P43005 CEP128-209ENST00000555265 4662 ntAPPRIS P1 TSL 5 BASIC9.29□□□□□ -0.92
SLC1A1P43005 CLK1-201ENST00000321356 1888 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
SLC1A1P43005 TRIM16-202ENST00000416464 3184 ntTSL 2 BASIC9.29□□□□□ -0.92
SLC1A1P43005 ZNF790-208ENST00000615484 2451 ntAPPRIS P1 TSL 5 BASIC9.29□□□□□ -0.92
SLC1A1P43005 ZMYND8-218ENST00000540497 3405 ntAPPRIS ALT2 TSL 1 (best) BASIC9.29□□□□□ -0.92
SLC1A1P43005 PSMC1P10-201ENST00000434820 1327 ntBASIC9.29□□□□□ -0.92
SLC1A1P43005 LINC01358-207ENST00000634502 2575 ntTSL 5 BASIC9.28□□□□□ -0.92
SLC1A1P43005 MRPL1-201ENST00000315567 1490 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
SLC1A1P43005 ZNF195-230ENST00000620374 3342 ntAPPRIS ALT2 TSL 5 BASIC9.28□□□□□ -0.92
SLC1A1P43005 XIST-211ENST00000635841 1734 ntTSL 5 BASIC9.28□□□□□ -0.92
SLC1A1P43005 MCC-209ENST00000515367 3844 ntTSL 5 BASIC9.28□□□□□ -0.92
SLC1A1P43005 MYOF-201ENST00000358334 6680 ntTSL 1 (best) BASIC9.28□□□□□ -0.92
SLC1A1P43005 NAIP-204ENST00000503719 5347 ntTSL 5 BASIC9.28□□□□□ -0.92
SLC1A1P43005 UBN2-201ENST00000473989 14444 ntAPPRIS P1 TSL 2 BASIC9.28□□□□□ -0.92
SLC1A1P43005 AC008124.1-201ENST00000609803 9730 ntBASIC9.28□□□□□ -0.92
SLC1A1P43005 ISX-201ENST00000308700 3384 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
SLC1A1P43005 SLC14A1-202ENST00000402943 1390 ntTSL 2 BASIC9.28□□□□□ -0.92
SLC1A1P43005 NF1P1-201ENST00000604105 2645 ntBASIC9.28□□□□□ -0.92
SLC1A1P43005 SYNE3-205ENST00000557275 13488 ntAPPRIS ALT1 TSL 2 BASIC9.28□□□□□ -0.92
SLC1A1P43005 ONECUT2-202ENST00000491143 16121 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
SLC1A1P43005 HGD-201ENST00000283871 2005 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
SLC1A1P43005 CYP2C8-211ENST00000539050 2024 ntTSL 3 BASIC9.28□□□□□ -0.92
SLC1A1P43005 PPP2R3A-205ENST00000490467 1782 ntTSL 2 BASIC9.28□□□□□ -0.92
SLC1A1P43005 SFR1-202ENST00000369729 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC9.28□□□□□ -0.92
SLC1A1P43005 RPS11-201ENST00000270625 614 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
SLC1A1P43005 DEFA5-201ENST00000330590 449 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
SLC1A1P43005 LDHAP4-201ENST00000397561 998 ntBASIC9.28□□□□□ -0.92
SLC1A1P43005 RNASE1-203ENST00000397970 769 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
SLC1A1P43005 EPSTI1-203ENST00000398762 957 ntAPPRIS ALT2 TSL 5 BASIC9.28□□□□□ -0.92
SLC1A1P43005 BRCC3-206ENST00000399042 954 ntAPPRIS ALT2 TSL 5 BASIC9.28□□□□□ -0.92
SLC1A1P43005 STPG3-202ENST00000412566 1191 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
SLC1A1P43005 AL592049.1-201ENST00000422490 1188 ntBASIC9.28□□□□□ -0.92
SLC1A1P43005 TRIM26BP-206ENST00000427723 753 ntBASIC9.28□□□□□ -0.92
SLC1A1P43005 ELOA-AS1-201ENST00000427796 1074 ntTSL 1 (best) BASIC9.28□□□□□ -0.92
SLC1A1P43005 AL392088.1-201ENST00000428364 670 ntBASIC9.28□□□□□ -0.92
SLC1A1P43005 CDC42-IT1-201ENST00000431803 692 ntTSL 1 (best) BASIC9.28□□□□□ -0.92
SLC1A1P43005 LINC01526-201ENST00000441949 520 ntTSL 1 (best) BASIC9.28□□□□□ -0.92
SLC1A1P43005 LINC02561-201ENST00000449457 692 ntTSL 3 BASIC9.28□□□□□ -0.92
SLC1A1P43005 HNRNPA3P2-201ENST00000451198 662 ntBASIC9.28□□□□□ -0.92
SLC1A1P43005 LINC00307-201ENST00000451410 424 ntTSL 1 (best) BASIC9.28□□□□□ -0.92
SLC1A1P43005 AL158090.1-201ENST00000453921 602 ntTSL 2 BASIC9.28□□□□□ -0.92
SLC1A1P43005 EGFLAM-207ENST00000506135 889 ntTSL 3 BASIC9.28□□□□□ -0.92
SLC1A1P43005 MTND6P17-201ENST00000511811 519 ntBASIC9.28□□□□□ -0.92
SLC1A1P43005 AC055876.4-201ENST00000562515 712 ntBASIC9.28□□□□□ -0.92
SLC1A1P43005 AC073869.3-201ENST00000609270 580 ntTSL 5 BASIC9.28□□□□□ -0.92
SLC1A1P43005 AC116050.1-201ENST00000609777 1194 ntTSL 1 (best) BASIC9.28□□□□□ -0.92
SLC1A1P43005 CAMKMT-210ENST00000613618 594 ntTSL 5 BASIC9.28□□□□□ -0.92
SLC1A1P43005 Metazoa_SRP.44-201ENST00000615037 294 ntBASIC9.28□□□□□ -0.92
SLC1A1P43005 HOXA11-AS1_2.1-201ENST00000615604 187 ntBASIC9.28□□□□□ -0.92
SLC1A1P43005 AC245505.3-201ENST00000616788 358 ntBASIC9.28□□□□□ -0.92
SLC1A1P43005 STPG3-205ENST00000620243 1025 ntTSL 1 (best) BASIC9.28□□□□□ -0.92
SLC1A1P43005 AC011483.4-201ENST00000623621 585 ntBASIC9.28□□□□□ -0.92
SLC1A1P43005 BRCC3-210ENST00000630295 954 ntTSL 5 BASIC9.28□□□□□ -0.92
SLC1A1P43005 BDNF-204ENST00000395980 4030 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
SLC1A1P43005 HEATR9-204ENST00000603870 1829 ntAPPRIS ALT2 TSL 2 BASIC9.28□□□□□ -0.92
SLC1A1P43005 NR1I2-203ENST00000466380 4306 ntAPPRIS ALT2 TSL 1 (best) BASIC9.28□□□□□ -0.92
SLC1A1P43005 ARMCX5-206ENST00000604957 4640 ntAPPRIS P1 BASIC9.28□□□□□ -0.92
SLC1A1P43005 ERG-210ENST00000442448 5034 ntTSL 5 BASIC9.28□□□□□ -0.92
SLC1A1P43005 KIF23-201ENST00000260363 3713 ntAPPRIS P4 TSL 1 (best) BASIC9.28□□□□□ -0.92
SLC1A1P43005 IQCH-AS1-203ENST00000559298 5753 ntTSL 5 BASIC9.27□□□□□ -0.92
SLC1A1P43005 UBE2V1-223ENST00000617119 2432 ntTSL 4 BASIC9.27□□□□□ -0.92
SLC1A1P43005 ALOXE3-202ENST00000380149 3362 ntTSL 1 (best) BASIC9.27□□□□□ -0.92
SLC1A1P43005 CCDC14-203ENST00000409697 2962 ntAPPRIS ALT2 TSL 2 BASIC9.27□□□□□ -0.92
SLC1A1P43005 BUB1B-201ENST00000287598 3725 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.93
SLC1A1P43005 PPIL4-201ENST00000253329 2232 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.93
SLC1A1P43005 FBXL17-206ENST00000619412 4059 ntTSL 1 (best) BASIC9.27□□□□□ -0.93
SLC1A1P43005 LIMK2-201ENST00000331728 3670 ntAPPRIS P4 TSL 1 (best) BASIC9.27□□□□□ -0.93
SLC1A1P43005 HSD17B7-201ENST00000254521 1190 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.93
SLC1A1P43005 WTAPP1-201ENST00000371455 546 ntTSL 4 BASIC9.27□□□□□ -0.93
SLC1A1P43005 UBE2C-205ENST00000372568 914 ntTSL 2 BASIC9.27□□□□□ -0.93
SLC1A1P43005 LY6G6E-225ENST00000383418 383 ntAPPRIS P5 TSL 1 (best) BASIC9.27□□□□□ -0.93
SLC1A1P43005 AGR2-201ENST00000401412 782 ntTSL 2 BASIC9.27□□□□□ -0.93
SLC1A1P43005 GEMIN6-203ENST00000409566 834 ntTSL 2 BASIC9.27□□□□□ -0.93
SLC1A1P43005 AL023773.2-201ENST00000412173 1005 ntBASIC9.27□□□□□ -0.93
SLC1A1P43005 TAC3-205ENST00000415231 588 ntAPPRIS P1 TSL 5 BASIC9.27□□□□□ -0.93
SLC1A1P43005 AL160290.1-201ENST00000415509 416 ntTSL 3 BASIC9.27□□□□□ -0.93
Retrieved 100 of 98,524 protein–RNA pairs in 61.1 ms