Protein–RNA interactions for Protein: Q6PIF2

SYCE2, Synaptonemal complex central element protein 2, humanhuman

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYCE2Q6PIF2 AL356235.1-201ENST00000602791 2363 ntTSL 2 BASIC9.42□□□□□ -0.9
SYCE2Q6PIF2 ACAP2-215ENST00000618471 3207 ntTSL 5 BASIC9.42□□□□□ -0.9
SYCE2Q6PIF2 EMP1-201ENST00000256951 5921 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
SYCE2Q6PIF2 ZNF85-202ENST00000328178 2296 ntAPPRIS P2 TSL 1 (best) BASIC9.42□□□□□ -0.9
SYCE2Q6PIF2 LIAS-222ENST00000640888 4041 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
SYCE2Q6PIF2 MAPK8-206ENST00000374189 5796 ntAPPRIS ALT1 TSL 5 BASIC9.42□□□□□ -0.9
SYCE2Q6PIF2 RPL4P3-201ENST00000428881 1311 ntBASIC9.42□□□□□ -0.9
SYCE2Q6PIF2 XRCC2-201ENST00000359321 3067 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
SYCE2Q6PIF2 POLR2K-201ENST00000353107 998 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
SYCE2Q6PIF2 RNA5SP71-201ENST00000362967 126 ntBASIC9.42□□□□□ -0.9
SYCE2Q6PIF2 RNA5-8SP2-201ENST00000363564 152 ntBASIC9.42□□□□□ -0.9
SYCE2Q6PIF2 IGLV2-14-201ENST00000390312 402 ntAPPRIS P1 BASIC9.42□□□□□ -0.9
SYCE2Q6PIF2 YWHAZ-202ENST00000395948 812 ntTSL 3 BASIC9.42□□□□□ -0.9
SYCE2Q6PIF2 FTH1P26-201ENST00000406512 701 ntBASIC9.42□□□□□ -0.9
SYCE2Q6PIF2 AC069213.1-202ENST00000417011 810 ntTSL 2 BASIC9.42□□□□□ -0.9
SYCE2Q6PIF2 RPSAP8-201ENST00000429844 889 ntBASIC9.42□□□□□ -0.9
SYCE2Q6PIF2 AL513318.1-201ENST00000437925 991 ntBASIC9.42□□□□□ -0.9
SYCE2Q6PIF2 PCBP1-AS1-233ENST00000442326 668 ntTSL 3 BASIC9.42□□□□□ -0.9
SYCE2Q6PIF2 RFC3P1-201ENST00000454568 682 ntBASIC9.42□□□□□ -0.9
SYCE2Q6PIF2 FP325330.1-201ENST00000457518 372 ntTSL 3 BASIC9.42□□□□□ -0.9
SYCE2Q6PIF2 AC139769.1-201ENST00000471224 1001 ntTSL 3 BASIC9.42□□□□□ -0.9
SYCE2Q6PIF2 AC008840.1-201ENST00000512486 809 ntTSL 5 BASIC9.42□□□□□ -0.9
SYCE2Q6PIF2 WBP1LP2-201ENST00000515260 998 ntBASIC9.42□□□□□ -0.9
SYCE2Q6PIF2 LINC01606-205ENST00000519314 562 ntTSL 4 BASIC9.42□□□□□ -0.9
SYCE2Q6PIF2 LDHA-220ENST00000542179 1288 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
SYCE2Q6PIF2 AC005833.4-201ENST00000542988 449 ntTSL 3 BASIC9.42□□□□□ -0.9
SYCE2Q6PIF2 AC063947.2-201ENST00000547000 1256 ntBASIC9.42□□□□□ -0.9
SYCE2Q6PIF2 OR11J5P-201ENST00000556889 934 ntBASIC9.42□□□□□ -0.9
SYCE2Q6PIF2 AC004224.2-201ENST00000574423 529 ntTSL 5 BASIC9.42□□□□□ -0.9
SYCE2Q6PIF2 SRP68P1-201ENST00000584247 269 ntBASIC9.42□□□□□ -0.9
SYCE2Q6PIF2 AC008734.2-201ENST00000595277 477 ntBASIC9.42□□□□□ -0.9
SYCE2Q6PIF2 CAMSAP2-203ENST00000413307 4498 ntAPPRIS ALT2 TSL 1 (best) BASIC9.42□□□□□ -0.9
SYCE2Q6PIF2 TPTE-201ENST00000427445 2036 ntAPPRIS ALT2 TSL 1 (best) BASIC9.42□□□□□ -0.9
SYCE2Q6PIF2 MYO7B-201ENST00000409090 3567 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
SYCE2Q6PIF2 LINC02006-202ENST00000492569 1958 ntTSL 2 BASIC9.42□□□□□ -0.9
SYCE2Q6PIF2 POTEA-202ENST00000522175 1931 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
SYCE2Q6PIF2 TXLNB-201ENST00000358430 4753 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
SYCE2Q6PIF2 RUNX1T1-252ENST00000617740 7627 ntAPPRIS P3 TSL 5 BASIC9.42□□□□□ -0.9
SYCE2Q6PIF2 SOX2-OT-213ENST00000492337 2508 ntTSL 2 BASIC9.42□□□□□ -0.9
SYCE2Q6PIF2 TP63-212ENST00000456148 1749 ntAPPRIS ALT1 TSL 5 BASIC9.42□□□□□ -0.9
SYCE2Q6PIF2 GAD1-217ENST00000625689 3700 ntTSL 5 BASIC9.42□□□□□ -0.9
SYCE2Q6PIF2 KIF13A-203ENST00000378814 6924 ntAPPRIS ALT2 TSL 1 (best) BASIC9.42□□□□□ -0.9
SYCE2Q6PIF2 SEMA4D-207ENST00000420987 4275 ntTSL 5 BASIC9.42□□□□□ -0.9
SYCE2Q6PIF2 SERAC1-205ENST00000607000 2284 ntTSL 2 BASIC9.42□□□□□ -0.9
SYCE2Q6PIF2 WDR20-201ENST00000299135 2198 ntTSL 1 (best) BASIC9.41□□□□□ -0.9
SYCE2Q6PIF2 SERPINB8-202ENST00000353706 3387 ntAPPRIS P1 TSL 5 BASIC9.41□□□□□ -0.9
SYCE2Q6PIF2 LINC00930-202ENST00000557075 1541 ntTSL 2 BASIC9.41□□□□□ -0.9
SYCE2Q6PIF2 PLG-202ENST00000308192 2741 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
SYCE2Q6PIF2 RABGEF1-201ENST00000284957 3733 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
SYCE2Q6PIF2 AC020604.1-201ENST00000622979 1909 ntBASIC9.41□□□□□ -0.9
SYCE2Q6PIF2 AMMECR1L-202ENST00000393001 4641 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
SYCE2Q6PIF2 WNT2B-203ENST00000369686 10879 ntTSL 1 (best) BASIC9.41□□□□□ -0.9
SYCE2Q6PIF2 GLRA1-201ENST00000274576 1803 ntAPPRIS P3 TSL 1 (best) BASIC9.41□□□□□ -0.9
SYCE2Q6PIF2 OR10G4-201ENST00000320891 936 ntAPPRIS P1 BASIC9.41□□□□□ -0.9
SYCE2Q6PIF2 RN7SKP264-201ENST00000411080 289 ntBASIC9.41□□□□□ -0.9
SYCE2Q6PIF2 IFNA4-201ENST00000421715 978 ntAPPRIS P1 BASIC9.41□□□□□ -0.9
SYCE2Q6PIF2 RPS23P8-201ENST00000429775 330 ntBASIC9.41□□□□□ -0.9
SYCE2Q6PIF2 PCBP1-AS1-242ENST00000458686 1020 ntTSL 5 BASIC9.41□□□□□ -0.9
SYCE2Q6PIF2 RPL10AP3-201ENST00000462503 651 ntBASIC9.41□□□□□ -0.9
SYCE2Q6PIF2 PSMD6-AS1-201ENST00000462717 441 ntTSL 3 BASIC9.41□□□□□ -0.9
SYCE2Q6PIF2 STXBP5L-204ENST00000471454 3813 ntAPPRIS ALT1 TSL 2 BASIC9.41□□□□□ -0.9
SYCE2Q6PIF2 RN7SL608P-201ENST00000492377 279 ntBASIC9.41□□□□□ -0.9
SYCE2Q6PIF2 GAPDHP35-201ENST00000513369 976 ntBASIC9.41□□□□□ -0.9
SYCE2Q6PIF2 FABP5P7-201ENST00000524732 405 ntBASIC9.41□□□□□ -0.9
SYCE2Q6PIF2 AP003499.1-201ENST00000527217 574 ntBASIC9.41□□□□□ -0.9
SYCE2Q6PIF2 AC007751.2-201ENST00000534173 291 ntBASIC9.41□□□□□ -0.9
SYCE2Q6PIF2 PHBP19-201ENST00000547512 754 ntBASIC9.41□□□□□ -0.9
SYCE2Q6PIF2 LINC02295-201ENST00000557072 374 ntTSL 1 (best) BASIC9.41□□□□□ -0.9
SYCE2Q6PIF2 AC109630.1-201ENST00000558846 730 ntTSL 3 BASIC9.41□□□□□ -0.9
SYCE2Q6PIF2 AC091180.5-201ENST00000576461 382 ntTSL 5 BASIC9.41□□□□□ -0.9
SYCE2Q6PIF2 snoZ6.4-201ENST00000581669 55 ntBASIC9.41□□□□□ -0.9
SYCE2Q6PIF2 AC096708.1-201ENST00000584419 658 ntBASIC9.41□□□□□ -0.9
SYCE2Q6PIF2 AC011487.1-202ENST00000597004 551 ntTSL 4 BASIC9.41□□□□□ -0.9
SYCE2Q6PIF2 AC002059.1-201ENST00000608014 477 ntBASIC9.41□□□□□ -0.9
SYCE2Q6PIF2 AC048380.3-201ENST00000623145 796 ntBASIC9.41□□□□□ -0.9
SYCE2Q6PIF2 AL355480.4-201ENST00000626823 69 ntBASIC9.41□□□□□ -0.9
SYCE2Q6PIF2 AC079602.4-201ENST00000637836 532 ntBASIC9.41□□□□□ -0.9
SYCE2Q6PIF2 AL009172.2-201ENST00000638776 717 ntTSL 5 BASIC9.41□□□□□ -0.9
SYCE2Q6PIF2 ABBA01040607.1-201ENST00000640749 321 ntBASIC9.41□□□□□ -0.9
SYCE2Q6PIF2 DMBT1-203ENST00000344338 7656 ntAPPRIS ALT2 TSL 1 (best) BASIC9.41□□□□□ -0.9
SYCE2Q6PIF2 DMBT1-205ENST00000368955 7656 ntAPPRIS ALT2 TSL 5 BASIC9.41□□□□□ -0.9
SYCE2Q6PIF2 THADA-202ENST00000402360 2974 ntTSL 5 BASIC9.41□□□□□ -0.9
SYCE2Q6PIF2 VWA5A-204ENST00000449321 1978 ntAPPRIS ALT2 TSL 1 (best) BASIC9.41□□□□□ -0.9
SYCE2Q6PIF2 CARMIL1-201ENST00000329474 5431 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
SYCE2Q6PIF2 KCNS3-202ENST00000403915 2397 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
SYCE2Q6PIF2 ATP5A1-202ENST00000398752 5818 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
SYCE2Q6PIF2 CSMD2-203ENST00000373377 3212 ntTSL 2 BASIC9.41□□□□□ -0.9
SYCE2Q6PIF2 FAM199X-202ENST00000493442 7457 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
SYCE2Q6PIF2 AC013391.3-201ENST00000567484 1456 ntBASIC9.4□□□□□ -0.9
SYCE2Q6PIF2 LRTOMT-222ENST00000615940 1895 ntTSL 5 BASIC9.4□□□□□ -0.9
SYCE2Q6PIF2 ASTE1-201ENST00000264992 2664 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
SYCE2Q6PIF2 ZNF860-201ENST00000360311 3098 ntAPPRIS P1 TSL 2 BASIC9.4□□□□□ -0.9
SYCE2Q6PIF2 LINC01260-201ENST00000415889 1416 ntTSL 5 BASIC9.4□□□□□ -0.9
SYCE2Q6PIF2 CDC27-204ENST00000527547 2579 ntAPPRIS ALT1 TSL 1 (best) BASIC9.4□□□□□ -0.9
SYCE2Q6PIF2 TCL6-207ENST00000483087 2194 ntTSL 2 BASIC9.4□□□□□ -0.9
SYCE2Q6PIF2 AFAP1L2-201ENST00000304129 3705 ntAPPRIS P4 TSL 1 (best) BASIC9.4□□□□□ -0.9
SYCE2Q6PIF2 SEL1L-201ENST00000336735 7925 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
SYCE2Q6PIF2 E2F3-202ENST00000535432 4425 ntAPPRIS ALT2 TSL 1 (best) BASIC9.4□□□□□ -0.9
SYCE2Q6PIF2 AC100827.4-201ENST00000563464 2441 ntBASIC9.4□□□□□ -0.9
SYCE2Q6PIF2 STAG3-219ENST00000620100 4203 ntAPPRIS ALT2 TSL 5 BASIC9.4□□□□□ -0.9
Retrieved 100 of 98,524 protein–RNA pairs in 61.6 ms