Protein–RNA interactions for Protein: R4GMX3

COMMD3-BMI1, COMMD3-BMI1 readthrough, humanhuman

Predictions only

Length 469 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD3-BMI1R4GMX3 PNMA8B-202ENST00000599531 5308 ntAPPRIS P1 BASIC19.16■□□□□ 0.66
COMMD3-BMI1R4GMX3 AL162377.1-201ENST00000618844 1793 ntBASIC19.16■□□□□ 0.66
COMMD3-BMI1R4GMX3 NUDT16L1-204ENST00000586536 1406 ntTSL 2 BASIC19.16■□□□□ 0.66
COMMD3-BMI1R4GMX3 UTP4-201ENST00000314423 2322 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
COMMD3-BMI1R4GMX3 ITPKB-203ENST00000429204 6162 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
COMMD3-BMI1R4GMX3 TBX1-203ENST00000359500 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
COMMD3-BMI1R4GMX3 EI24-211ENST00000534546 1544 ntTSL 2 BASIC19.15■□□□□ 0.66
COMMD3-BMI1R4GMX3 ACD-214ENST00000620338 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
COMMD3-BMI1R4GMX3 ADORA2A-201ENST00000337539 2569 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
COMMD3-BMI1R4GMX3 HOXA13-201ENST00000222753 5030 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
COMMD3-BMI1R4GMX3 DLGAP4-201ENST00000339266 5016 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
COMMD3-BMI1R4GMX3 CPNE7-201ENST00000268720 2657 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
COMMD3-BMI1R4GMX3 P2RX2-205ENST00000352418 1200 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
COMMD3-BMI1R4GMX3 NAXE-201ENST00000368233 1012 ntTSL 2 BASIC19.15■□□□□ 0.66
COMMD3-BMI1R4GMX3 TRAPPC5-202ENST00000426877 765 ntAPPRIS P1 TSL 2 BASIC19.15■□□□□ 0.66
COMMD3-BMI1R4GMX3 OR2I1P-207ENST00000453522 948 ntBASIC19.15■□□□□ 0.66
COMMD3-BMI1R4GMX3 GRK2-201ENST00000308595 3466 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
COMMD3-BMI1R4GMX3 MMP28-201ENST00000605424 1928 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
COMMD3-BMI1R4GMX3 SNX32-201ENST00000308342 2003 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
COMMD3-BMI1R4GMX3 WNK2-204ENST00000427277 6108 ntTSL 5 BASIC19.15■□□□□ 0.66
COMMD3-BMI1R4GMX3 BST1-201ENST00000265016 1480 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
COMMD3-BMI1R4GMX3 BCKDK-201ENST00000219794 2128 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
COMMD3-BMI1R4GMX3 UCHL5-201ENST00000367448 1534 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
COMMD3-BMI1R4GMX3 STRN3-202ENST00000357479 2799 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
COMMD3-BMI1R4GMX3 INAVA-202ENST00000413687 2197 ntAPPRIS P2 TSL 2 BASIC19.15■□□□□ 0.66
COMMD3-BMI1R4GMX3 AL390879.2-201ENST00000424306 2222 ntTSL 2 BASIC19.15■□□□□ 0.66
COMMD3-BMI1R4GMX3 MYCBPAP-202ENST00000419930 1640 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.66
COMMD3-BMI1R4GMX3 IDH1-205ENST00000446179 2298 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
COMMD3-BMI1R4GMX3 PDLIM3-203ENST00000284771 1672 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
COMMD3-BMI1R4GMX3 SNAP47-202ENST00000366759 2362 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.66
COMMD3-BMI1R4GMX3 CLN8-208ENST00000635751 1807 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.65
COMMD3-BMI1R4GMX3 FOXP4-202ENST00000373057 3300 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
COMMD3-BMI1R4GMX3 SYN2-206ENST00000621198 2674 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
COMMD3-BMI1R4GMX3 SH2B1-202ENST00000337120 6043 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
COMMD3-BMI1R4GMX3 ARID1A-201ENST00000324856 8577 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.65
COMMD3-BMI1R4GMX3 ZNF582-202ENST00000586929 2053 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
COMMD3-BMI1R4GMX3 KCNN2-207ENST00000610748 2091 ntTSL 3 BASIC19.14■□□□□ 0.65
COMMD3-BMI1R4GMX3 LRRC27-203ENST00000368613 2113 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.65
COMMD3-BMI1R4GMX3 ADAMTS13-203ENST00000371910 1074 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
COMMD3-BMI1R4GMX3 SMARCA5-AS1-201ENST00000500800 945 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
COMMD3-BMI1R4GMX3 ARHGDIA-217ENST00000584461 886 ntTSL 2 BASIC19.14■□□□□ 0.65
COMMD3-BMI1R4GMX3 AC092171.4-201ENST00000609130 632 ntBASIC19.14■□□□□ 0.65
COMMD3-BMI1R4GMX3 KCNC2-204ENST00000540018 2168 ntAPPRIS ALT2 TSL 2 BASIC19.14■□□□□ 0.65
COMMD3-BMI1R4GMX3 KIAA0895L-206ENST00000563902 2233 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
COMMD3-BMI1R4GMX3 EIF4ENIF1-202ENST00000344710 3115 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
COMMD3-BMI1R4GMX3 MORF4L1-201ENST00000331268 2359 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
COMMD3-BMI1R4GMX3 ARRDC1-AS1-201ENST00000371417 1409 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
COMMD3-BMI1R4GMX3 OR7E47P-201ENST00000546390 1422 ntBASIC19.14■□□□□ 0.65
COMMD3-BMI1R4GMX3 C22orf34-203ENST00000405854 1593 ntTSL 5 BASIC19.14■□□□□ 0.65
COMMD3-BMI1R4GMX3 PRKCI-201ENST00000295797 4950 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
COMMD3-BMI1R4GMX3 PUS1-203ENST00000443358 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
COMMD3-BMI1R4GMX3 FARSA-201ENST00000314606 1814 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
COMMD3-BMI1R4GMX3 DCTD-202ENST00000438320 1972 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
COMMD3-BMI1R4GMX3 HERC2P8-204ENST00000567073 1988 ntTSL 5 BASIC19.13■□□□□ 0.65
COMMD3-BMI1R4GMX3 TP53RK-201ENST00000372102 2012 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
COMMD3-BMI1R4GMX3 CAPZB-202ENST00000264203 2068 ntTSL 2 BASIC19.13■□□□□ 0.65
COMMD3-BMI1R4GMX3 GALNT10-201ENST00000297107 5961 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
COMMD3-BMI1R4GMX3 MYH14-206ENST00000596571 5988 ntAPPRIS ALT2 TSL 5 BASIC19.13■□□□□ 0.65
COMMD3-BMI1R4GMX3 KCNC3-203ENST00000477616 3176 ntAPPRIS P2 TSL 1 (best) BASIC19.13■□□□□ 0.65
COMMD3-BMI1R4GMX3 FBXL3-201ENST00000355619 3503 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
COMMD3-BMI1R4GMX3 ANAPC13-201ENST00000354910 1209 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
COMMD3-BMI1R4GMX3 TNFRSF6B-201ENST00000369996 1124 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
COMMD3-BMI1R4GMX3 DPP10-AS1-201ENST00000432658 730 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
COMMD3-BMI1R4GMX3 AL356441.2-201ENST00000443009 864 ntBASIC19.13■□□□□ 0.65
COMMD3-BMI1R4GMX3 AC096887.1-203ENST00000607203 768 ntAPPRIS ALT2 TSL 5 BASIC19.13■□□□□ 0.65
COMMD3-BMI1R4GMX3 GRAMD1B-217ENST00000640939 1212 ntTSL 5 BASIC19.13■□□□□ 0.65
COMMD3-BMI1R4GMX3 SYF2-201ENST00000236273 1345 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
COMMD3-BMI1R4GMX3 MTMR14-206ENST00000420925 1427 ntAPPRIS ALT2 TSL 2 BASIC19.13■□□□□ 0.65
COMMD3-BMI1R4GMX3 IMPA2-201ENST00000269159 1534 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
COMMD3-BMI1R4GMX3 SNUPN-201ENST00000308588 1513 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
COMMD3-BMI1R4GMX3 HLA-C-201ENST00000376228 1536 ntAPPRIS P2 BASIC19.13■□□□□ 0.65
COMMD3-BMI1R4GMX3 C2CD4B-201ENST00000380392 1579 ntAPPRIS P1 TSL 2 BASIC19.13■□□□□ 0.65
COMMD3-BMI1R4GMX3 LAYN-204ENST00000525126 1763 ntTSL 5 BASIC19.13■□□□□ 0.65
COMMD3-BMI1R4GMX3 IGFALS-201ENST00000215539 2116 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
COMMD3-BMI1R4GMX3 CYGB-201ENST00000293230 2158 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
COMMD3-BMI1R4GMX3 TANGO2-217ENST00000456048 2439 ntTSL 2 BASIC19.13■□□□□ 0.65
COMMD3-BMI1R4GMX3 SPSB4-201ENST00000310546 2908 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
COMMD3-BMI1R4GMX3 UBE2QL1-201ENST00000399816 4317 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
COMMD3-BMI1R4GMX3 CACNA1B-203ENST00000371355 9647 ntAPPRIS ALT2 TSL 5 BASIC19.12■□□□□ 0.65
COMMD3-BMI1R4GMX3 EIF3B-202ENST00000397011 2966 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
COMMD3-BMI1R4GMX3 LPAR2-202ENST00000542587 2546 ntAPPRIS P1 TSL 2 BASIC19.12■□□□□ 0.65
COMMD3-BMI1R4GMX3 CWH43-201ENST00000226432 2472 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
COMMD3-BMI1R4GMX3 OGG1-203ENST00000302036 2220 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
COMMD3-BMI1R4GMX3 ANXA8-208ENST00000611843 2174 ntTSL 2 BASIC19.12■□□□□ 0.65
COMMD3-BMI1R4GMX3 LHX9-206ENST00000561173 2144 ntTSL 5 BASIC19.12■□□□□ 0.65
COMMD3-BMI1R4GMX3 KLHL31-202ENST00000407079 1905 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
COMMD3-BMI1R4GMX3 CDC14A-203ENST00000370124 1883 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
COMMD3-BMI1R4GMX3 RNF8-204ENST00000469731 1800 ntTSL 5 BASIC19.12■□□□□ 0.65
COMMD3-BMI1R4GMX3 TMEM218-213ENST00000531909 1828 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
COMMD3-BMI1R4GMX3 FAM120B-204ENST00000625626 1794 ntAPPRIS ALT2 TSL 2 BASIC19.12■□□□□ 0.65
COMMD3-BMI1R4GMX3 AF117829.1-201ENST00000519655 1398 ntTSL 5 BASIC19.12■□□□□ 0.65
COMMD3-BMI1R4GMX3 RBM38-205ENST00000440234 686 ntTSL 2 BASIC19.12■□□□□ 0.65
COMMD3-BMI1R4GMX3 WDR86-AS1-204ENST00000489632 751 ntTSL 3 BASIC19.12■□□□□ 0.65
COMMD3-BMI1R4GMX3 FAM189B-204ENST00000368368 2609 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
COMMD3-BMI1R4GMX3 CPQ-201ENST00000220763 1947 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
COMMD3-BMI1R4GMX3 SPHK1-207ENST00000590959 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
COMMD3-BMI1R4GMX3 ACBD4-201ENST00000321854 1806 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
COMMD3-BMI1R4GMX3 NAGK-229ENST00000613852 1801 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
COMMD3-BMI1R4GMX3 CDK11B-207ENST00000626918 2457 ntTSL 5 BASIC19.11■□□□□ 0.65
COMMD3-BMI1R4GMX3 HAPLN4-201ENST00000291481 3449 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 36.5 ms