Protein–RNA interactions for Protein: Q9Y5T5

USP16, Ubiquitin carboxyl-terminal hydrolase 16, humanhuman

Predictions only

Length 823 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP16Q9Y5T5 DOCK5-208ENST00000481100 2166 ntTSL 1 (best) BASIC26.24■■□□□ 1.79
USP16Q9Y5T5 PDS5A-202ENST00000503396 2685 ntTSL 1 (best) BASIC26.24■■□□□ 1.79
USP16Q9Y5T5 TACO1-201ENST00000258975 1469 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
USP16Q9Y5T5 HSDL1-202ENST00000434463 1493 ntTSL 2 BASIC26.24■■□□□ 1.79
USP16Q9Y5T5 AC010173.1-201ENST00000549023 1453 ntTSL 2 BASIC26.24■■□□□ 1.79
USP16Q9Y5T5 DBNL-207ENST00000440166 1415 ntTSL 2 BASIC26.24■■□□□ 1.79
USP16Q9Y5T5 AGTRAP-203ENST00000376629 1100 ntAPPRIS ALT2 TSL 1 (best) BASIC26.24■■□□□ 1.79
USP16Q9Y5T5 AC108693.2-201ENST00000492981 303 ntTSL 3 BASIC26.24■■□□□ 1.79
USP16Q9Y5T5 METTL23-208ENST00000588822 1049 ntTSL 3 BASIC26.24■■□□□ 1.79
USP16Q9Y5T5 ANAPC1P1-202ENST00000616781 1771 ntTSL 1 (best) BASIC26.24■■□□□ 1.79
USP16Q9Y5T5 DGAT2-201ENST00000228027 2453 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
USP16Q9Y5T5 TOR2A-203ENST00000373284 1523 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
USP16Q9Y5T5 BORCS8-MEF2B-202ENST00000444486 1492 ntAPPRIS P2 TSL 2 BASIC26.23■■□□□ 1.79
USP16Q9Y5T5 AC244015.2-201ENST00000616358 1861 ntBASIC26.23■■□□□ 1.79
USP16Q9Y5T5 PPP1R12B-212ENST00000480184 1808 ntTSL 1 (best) BASIC26.23■■□□□ 1.79
USP16Q9Y5T5 ALG1L9P-201ENST00000508969 2165 ntTSL 1 (best) BASIC26.23■■□□□ 1.79
USP16Q9Y5T5 RBM42-204ENST00000589559 1328 ntTSL 5 BASIC26.23■■□□□ 1.79
USP16Q9Y5T5 SCRT2-201ENST00000246104 3577 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
USP16Q9Y5T5 ABHD14A-201ENST00000273596 1062 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
USP16Q9Y5T5 PLPP7-201ENST00000372261 972 ntTSL 2 BASIC26.23■■□□□ 1.79
USP16Q9Y5T5 DUSP15-205ENST00000398084 1256 ntTSL 5 BASIC26.23■■□□□ 1.79
USP16Q9Y5T5 C5orf38-206ENST00000505778 509 ntAPPRIS ALT2 TSL 1 (best) BASIC26.23■■□□□ 1.79
USP16Q9Y5T5 NAT14-204ENST00000591590 1011 ntTSL 1 (best) BASIC26.23■■□□□ 1.79
USP16Q9Y5T5 MDFI-203ENST00000373051 1622 ntAPPRIS P1 TSL 5 BASIC26.23■■□□□ 1.79
USP16Q9Y5T5 UBTF-213ENST00000533177 3011 ntTSL 5 BASIC26.23■■□□□ 1.79
USP16Q9Y5T5 AC012676.1-201ENST00000574705 1949 ntBASIC26.23■■□□□ 1.79
USP16Q9Y5T5 AL117328.2-201ENST00000624617 1940 ntBASIC26.23■■□□□ 1.79
USP16Q9Y5T5 ARX-201ENST00000379044 2876 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
USP16Q9Y5T5 ZBTB46-202ENST00000302995 2335 ntAPPRIS P1 TSL 2 BASIC26.22■■□□□ 1.79
USP16Q9Y5T5 DDX31-206ENST00000480876 1333 ntTSL 1 (best) BASIC26.22■■□□□ 1.79
USP16Q9Y5T5 LINC00708-201ENST00000428165 916 ntTSL 1 (best) BASIC26.22■■□□□ 1.79
USP16Q9Y5T5 AC073050.1-201ENST00000442316 462 ntTSL 3 BASIC26.22■■□□□ 1.79
USP16Q9Y5T5 FAM163B-202ENST00000496132 811 ntAPPRIS P1 TSL 3 BASIC26.22■■□□□ 1.79
USP16Q9Y5T5 CAPN12-212ENST00000601953 2381 ntTSL 5 BASIC26.22■■□□□ 1.79
USP16Q9Y5T5 P4HA2-202ENST00000360568 2313 ntAPPRIS ALT1 TSL 1 (best) BASIC26.22■■□□□ 1.79
USP16Q9Y5T5 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC26.22■■□□□ 1.79
USP16Q9Y5T5 YBX3-202ENST00000279550 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC26.22■■□□□ 1.79
USP16Q9Y5T5 TRIM3-214ENST00000536344 2704 ntTSL 2 BASIC26.22■■□□□ 1.79
USP16Q9Y5T5 ST8SIA1-204ENST00000404299 1920 ntTSL 1 (best) BASIC26.22■■□□□ 1.79
USP16Q9Y5T5 SYT7-209ENST00000542836 1362 ntTSL 5 BASIC26.21■■□□□ 1.79
USP16Q9Y5T5 WIPF1-205ENST00000409415 1772 ntTSL 1 (best) BASIC26.21■■□□□ 1.79
USP16Q9Y5T5 NKX2-4-201ENST00000351817 2238 ntAPPRIS P1 TSL 5 BASIC26.21■■□□□ 1.79
USP16Q9Y5T5 NDUFB1-201ENST00000329559 528 ntTSL 1 (best) BASIC26.21■■□□□ 1.79
USP16Q9Y5T5 RHOC-203ENST00000369632 1026 ntAPPRIS P1 TSL 3 BASIC26.21■■□□□ 1.79
USP16Q9Y5T5 TNFRSF1B-204ENST00000536782 557 ntTSL 1 (best) BASIC26.21■■□□□ 1.79
USP16Q9Y5T5 EIF2AK4-209ENST00000560648 687 ntTSL 3 BASIC26.21■■□□□ 1.79
USP16Q9Y5T5 MAZ-215ENST00000569978 567 ntTSL 1 (best) BASIC26.21■■□□□ 1.79
USP16Q9Y5T5 AC011446.2-202ENST00000592882 756 ntTSL 3 BASIC26.21■■□□□ 1.79
USP16Q9Y5T5 PTGIR-202ENST00000594275 699 ntTSL 3 BASIC26.21■■□□□ 1.79
USP16Q9Y5T5 PTGIR-206ENST00000598865 724 ntTSL 3 BASIC26.21■■□□□ 1.79
USP16Q9Y5T5 Z99916.2-201ENST00000604037 246 ntBASIC26.21■■□□□ 1.79
USP16Q9Y5T5 FAM197Y4-202ENST00000622692 608 ntBASIC26.21■■□□□ 1.79
USP16Q9Y5T5 AC006557.6-201ENST00000623071 864 ntBASIC26.21■■□□□ 1.79
USP16Q9Y5T5 CERKL-201ENST00000339098 1677 ntAPPRIS P3 TSL 1 (best) BASIC26.21■■□□□ 1.79
USP16Q9Y5T5 PKMYT1-213ENST00000574385 1892 ntAPPRIS P1 TSL 2 BASIC26.21■■□□□ 1.79
USP16Q9Y5T5 CHKB-201ENST00000406938 1638 ntAPPRIS P1 TSL 1 (best) BASIC26.21■■□□□ 1.79
USP16Q9Y5T5 COPS7A-208ENST00000538410 1610 ntTSL 3 BASIC26.21■■□□□ 1.79
USP16Q9Y5T5 CNRIP1-201ENST00000263655 1953 ntAPPRIS P1 TSL 1 (best) BASIC26.2■■□□□ 1.79
USP16Q9Y5T5 ARRB2-216ENST00000574954 1348 ntTSL 1 (best) BASIC26.2■■□□□ 1.79
USP16Q9Y5T5 CTDSPL-206ENST00000443503 4640 ntAPPRIS ALT1 TSL 1 (best) BASIC26.2■■□□□ 1.78
USP16Q9Y5T5 ADRM1-201ENST00000253003 1478 ntAPPRIS P1 TSL 1 (best) BASIC26.2■■□□□ 1.78
USP16Q9Y5T5 R3HCC1-210ENST00000625275 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC26.2■■□□□ 1.78
USP16Q9Y5T5 PARL-201ENST00000311101 1240 ntTSL 1 (best) BASIC26.2■■□□□ 1.78
USP16Q9Y5T5 DEDD2-205ENST00000596251 1183 ntAPPRIS P3 TSL 1 (best) BASIC26.2■■□□□ 1.78
USP16Q9Y5T5 BRWD1-AS2-201ENST00000603064 1028 ntBASIC26.2■■□□□ 1.78
USP16Q9Y5T5 TMEM17-201ENST00000335390 1797 ntAPPRIS P1 TSL 1 (best) BASIC26.2■■□□□ 1.78
USP16Q9Y5T5 PDXK-205ENST00000398081 2251 ntTSL 2 BASIC26.19■■□□□ 1.78
USP16Q9Y5T5 ZNF511-201ENST00000359035 2004 ntTSL 2 BASIC26.19■■□□□ 1.78
USP16Q9Y5T5 RHOT1-205ENST00000545287 2516 ntAPPRIS P4 TSL 5 BASIC26.19■■□□□ 1.78
USP16Q9Y5T5 PTGER3-203ENST00000354608 1470 ntAPPRIS ALT2 TSL 5 BASIC26.19■■□□□ 1.78
USP16Q9Y5T5 KHDRBS2-201ENST00000281156 2332 ntAPPRIS P1 TSL 1 (best) BASIC26.19■■□□□ 1.78
USP16Q9Y5T5 DR1-201ENST00000370267 1647 ntAPPRIS P1 TSL 2 BASIC26.19■■□□□ 1.78
USP16Q9Y5T5 MZB1-201ENST00000302125 825 ntAPPRIS P1 TSL 1 (best) BASIC26.19■■□□□ 1.78
USP16Q9Y5T5 HP1BP3-202ENST00000375000 928 ntTSL 1 (best) BASIC26.19■■□□□ 1.78
USP16Q9Y5T5 RNF5-203ENST00000375094 1168 ntAPPRIS P1 TSL 1 (best) BASIC26.19■■□□□ 1.78
USP16Q9Y5T5 SPINK2-202ENST00000504762 659 ntAPPRIS ALT2 TSL 2 BASIC26.19■■□□□ 1.78
USP16Q9Y5T5 MCRIP1-203ENST00000538396 925 ntAPPRIS P1 TSL 1 (best) BASIC26.19■■□□□ 1.78
USP16Q9Y5T5 TGIF1-219ENST00000551541 990 ntTSL 2 BASIC26.19■■□□□ 1.78
USP16Q9Y5T5 AC005829.2-201ENST00000571422 1056 ntBASIC26.19■■□□□ 1.78
USP16Q9Y5T5 SPIB-206ENST00000596074 847 ntTSL 2 BASIC26.19■■□□□ 1.78
USP16Q9Y5T5 AC120498.8-201ENST00000614275 531 ntBASIC26.19■■□□□ 1.78
USP16Q9Y5T5 SLC38A7-205ENST00000564010 1437 ntTSL 2 BASIC26.19■■□□□ 1.78
USP16Q9Y5T5 FBXW4P1-201ENST00000426721 2239 ntBASIC26.19■■□□□ 1.78
USP16Q9Y5T5 TBL1Y-202ENST00000355162 2376 ntAPPRIS P1 TSL 1 (best) BASIC26.19■■□□□ 1.78
USP16Q9Y5T5 MEF2A-207ENST00000558812 2186 ntTSL 2 BASIC26.19■■□□□ 1.78
USP16Q9Y5T5 MCMBP-202ENST00000369077 2465 ntAPPRIS ALT1 TSL 1 (best) BASIC26.19■■□□□ 1.78
USP16Q9Y5T5 P4HTM-202ENST00000383729 2127 ntAPPRIS P1 TSL 1 (best) BASIC26.18■■□□□ 1.78
USP16Q9Y5T5 TOLLIP-201ENST00000263646 2283 ntTSL 5 BASIC26.18■■□□□ 1.78
USP16Q9Y5T5 SLC1A7-201ENST00000371491 1306 ntTSL 1 (best) BASIC26.18■■□□□ 1.78
USP16Q9Y5T5 DBNDD2-206ENST00000372720 1481 ntTSL 1 (best) BASIC26.18■■□□□ 1.78
USP16Q9Y5T5 LCE2A-201ENST00000368779 592 ntAPPRIS P1 TSL 1 (best) BASIC26.18■■□□□ 1.78
USP16Q9Y5T5 THEM4-205ENST00000489410 643 ntTSL 2 BASIC26.18■■□□□ 1.78
USP16Q9Y5T5 SFXN1-203ENST00000502393 637 ntTSL 2 BASIC26.18■■□□□ 1.78
USP16Q9Y5T5 AC011484.1-201ENST00000377652 1995 ntBASIC26.18■■□□□ 1.78
USP16Q9Y5T5 C10orf91-202ENST00000392630 1846 ntTSL 2 BASIC26.18■■□□□ 1.78
USP16Q9Y5T5 MOK-233ENST00000524214 1539 ntTSL 2 BASIC26.18■■□□□ 1.78
USP16Q9Y5T5 GMPPA-205ENST00000373917 1630 ntTSL 5 BASIC26.17■■□□□ 1.78
USP16Q9Y5T5 CUEDC1-202ENST00000407144 2190 ntAPPRIS P1 TSL 5 BASIC26.17■■□□□ 1.78
USP16Q9Y5T5 CDKN2B-AS1-217ENST00000585267 1337 ntTSL 1 (best) BASIC26.17■■□□□ 1.78
USP16Q9Y5T5 Z98882.1-201ENST00000622160 2253 ntBASIC26.17■■□□□ 1.78
Retrieved 100 of 98,524 protein–RNA pairs in 21 ms