Protein–RNA interactions for Protein: Q9Y5P3

RAI2, Retinoic acid-induced protein 2, humanhuman

Predictions only

Length 530 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAI2Q9Y5P3 DNAAF3-201ENST00000391720 2169 ntAPPRIS P3 TSL 2 BASIC20.69■□□□□ 0.9
RAI2Q9Y5P3 S1PR5-202ENST00000439028 2191 ntAPPRIS P1 TSL 2 BASIC20.69■□□□□ 0.9
RAI2Q9Y5P3 PNMA2-204ENST00000522362 4965 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
RAI2Q9Y5P3 ERMP1-202ENST00000339450 5376 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
RAI2Q9Y5P3 IFI6-202ENST00000361157 841 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
RAI2Q9Y5P3 POLR2J-202ENST00000393794 784 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
RAI2Q9Y5P3 LINC01659-202ENST00000449711 917 ntTSL 3 BASIC20.69■□□□□ 0.9
RAI2Q9Y5P3 AC100791.3-201ENST00000617619 330 ntBASIC20.69■□□□□ 0.9
RAI2Q9Y5P3 NDUFAF3-202ENST00000326925 2012 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
RAI2Q9Y5P3 KLHDC4-204ENST00000353170 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
RAI2Q9Y5P3 ACY1-207ENST00000476854 1319 ntTSL 3 BASIC20.69■□□□□ 0.9
RAI2Q9Y5P3 EIF2B4-201ENST00000347454 1792 ntAPPRIS P3 TSL 1 (best) BASIC20.69■□□□□ 0.9
RAI2Q9Y5P3 ORAI3-201ENST00000318663 2206 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
RAI2Q9Y5P3 AC010980.2-201ENST00000587099 1412 ntBASIC20.69■□□□□ 0.9
RAI2Q9Y5P3 BIN1-202ENST00000316724 2693 ntAPPRIS P4 TSL 1 (best) BASIC20.69■□□□□ 0.9
RAI2Q9Y5P3 MEIS2-207ENST00000557796 2666 ntTSL 5 BASIC20.69■□□□□ 0.9
RAI2Q9Y5P3 SDK1-201ENST00000389531 7606 ntAPPRIS ALT2 TSL 5 BASIC20.69■□□□□ 0.9
RAI2Q9Y5P3 THEM6-201ENST00000336138 2259 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
RAI2Q9Y5P3 CYP21A1P-202ENST00000354927 1481 ntBASIC20.69■□□□□ 0.9
RAI2Q9Y5P3 SLC25A24P1-201ENST00000411846 1569 ntTSL 5 BASIC20.68■□□□□ 0.9
RAI2Q9Y5P3 CHKB-201ENST00000406938 1638 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
RAI2Q9Y5P3 KCNQ1-202ENST00000335475 2159 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
RAI2Q9Y5P3 BOK-201ENST00000318407 2657 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
RAI2Q9Y5P3 LRRC75A-201ENST00000409083 2656 ntAPPRIS P3 TSL 2 BASIC20.68■□□□□ 0.9
RAI2Q9Y5P3 SYTL1-211ENST00000618673 1712 ntTSL 5 BASIC20.68■□□□□ 0.9
RAI2Q9Y5P3 CLDND1-202ENST00000394180 2228 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
RAI2Q9Y5P3 SMPDL3A-203ENST00000539041 1755 ntTSL 2 BASIC20.68■□□□□ 0.9
RAI2Q9Y5P3 TMEM218-201ENST00000279968 1034 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
RAI2Q9Y5P3 GRTP1-201ENST00000326039 1294 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
RAI2Q9Y5P3 PRSS3-202ENST00000361005 966 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
RAI2Q9Y5P3 CD99P1-203ENST00000431582 602 ntTSL 4 BASIC20.68■□□□□ 0.9
RAI2Q9Y5P3 GUSBP6-202ENST00000438529 1198 ntBASIC20.68■□□□□ 0.9
RAI2Q9Y5P3 HTT-AS-201ENST00000503893 515 ntTSL 4 BASIC20.68■□□□□ 0.9
RAI2Q9Y5P3 AC008443.6-201ENST00000512508 500 ntTSL 4 BASIC20.68■□□□□ 0.9
RAI2Q9Y5P3 COX6C-208ENST00000522940 694 ntAPPRIS P1 TSL 3 BASIC20.68■□□□□ 0.9
RAI2Q9Y5P3 PTGIR-205ENST00000597185 775 ntTSL 3 BASIC20.68■□□□□ 0.9
RAI2Q9Y5P3 DBX2-201ENST00000332700 2806 ntAPPRIS P1 TSL 2 BASIC20.68■□□□□ 0.9
RAI2Q9Y5P3 CREB3-201ENST00000353704 1832 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
RAI2Q9Y5P3 NFYC-204ENST00000372653 1862 ntTSL 2 BASIC20.68■□□□□ 0.9
RAI2Q9Y5P3 TRMT2A-204ENST00000439169 2473 ntTSL 5 BASIC20.68■□□□□ 0.9
RAI2Q9Y5P3 SPRN-201ENST00000414069 3128 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
RAI2Q9Y5P3 ADAMTS2-202ENST00000274609 2044 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
RAI2Q9Y5P3 PGPEP1L-202ENST00000535714 1483 ntTSL 2 BASIC20.68■□□□□ 0.9
RAI2Q9Y5P3 FEZF1-203ENST00000442488 2099 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
RAI2Q9Y5P3 MADCAM1-201ENST00000215637 1572 ntAPPRIS P4 TSL 1 (best) BASIC20.68■□□□□ 0.9
RAI2Q9Y5P3 BAZ1A-202ENST00000360310 6010 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
RAI2Q9Y5P3 EGFL7-201ENST00000308874 1747 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
RAI2Q9Y5P3 DALRD3-202ENST00000341949 1739 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
RAI2Q9Y5P3 OTUB1-209ENST00000538426 1729 ntAPPRIS P2 TSL 1 (best) BASIC20.67■□□□□ 0.9
RAI2Q9Y5P3 TXNRD3-204ENST00000640433 1932 ntAPPRIS P4 TSL 1 (best) BASIC20.67■□□□□ 0.9
RAI2Q9Y5P3 ACOT8-201ENST00000217455 1168 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
RAI2Q9Y5P3 GUK1-201ENST00000312726 1084 ntAPPRIS P3 TSL 1 (best) BASIC20.67■□□□□ 0.9
RAI2Q9Y5P3 NUDT8-202ENST00000376693 728 ntAPPRIS ALT2 TSL 2 BASIC20.67■□□□□ 0.9
RAI2Q9Y5P3 MDK-205ENST00000405308 1166 ntAPPRIS P2 TSL 2 BASIC20.67■□□□□ 0.9
RAI2Q9Y5P3 FTCDNL1-202ENST00000420128 1021 ntTSL 5 BASIC20.67■□□□□ 0.9
RAI2Q9Y5P3 AC069152.1-201ENST00000438030 544 ntBASIC20.67■□□□□ 0.9
RAI2Q9Y5P3 FADS3-204ENST00000525588 1254 ntTSL 5 BASIC20.67■□□□□ 0.9
RAI2Q9Y5P3 SACM1L-202ENST00000418611 2164 ntTSL 2 BASIC20.67■□□□□ 0.9
RAI2Q9Y5P3 MMP23B-202ENST00000378675 1309 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
RAI2Q9Y5P3 NPDC1-202ENST00000371601 1494 ntAPPRIS P2 TSL 1 (best) BASIC20.67■□□□□ 0.9
RAI2Q9Y5P3 CDK6-202ENST00000424848 1465 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
RAI2Q9Y5P3 NAT16-204ENST00000455377 1492 ntAPPRIS P2 TSL 1 (best) BASIC20.67■□□□□ 0.9
RAI2Q9Y5P3 AC008687.4-201ENST00000637680 1485 ntAPPRIS P1 TSL 5 BASIC20.67■□□□□ 0.9
RAI2Q9Y5P3 NIPAL4-202ENST00000435489 1600 ntAPPRIS ALT2 TSL 2 BASIC20.67■□□□□ 0.9
RAI2Q9Y5P3 PNKP-215ENST00000600910 1600 ntTSL 5 BASIC20.67■□□□□ 0.9
RAI2Q9Y5P3 FAM151B-201ENST00000282226 1717 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
RAI2Q9Y5P3 AL161756.1-202ENST00000359491 1717 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
RAI2Q9Y5P3 GCH1-205ENST00000536224 1805 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
RAI2Q9Y5P3 NUDT10-201ENST00000356450 1917 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
RAI2Q9Y5P3 USP48-205ENST00000421625 2818 ntTSL 2 BASIC20.66■□□□□ 0.9
RAI2Q9Y5P3 CSNK1G2-201ENST00000255641 2918 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
RAI2Q9Y5P3 CAPN10-202ENST00000270364 1267 ntTSL 2 BASIC20.66■□□□□ 0.9
RAI2Q9Y5P3 MCRIP2P1-201ENST00000394346 511 ntBASIC20.66■□□□□ 0.9
RAI2Q9Y5P3 STAG3L3-201ENST00000423834 1262 ntTSL 2 BASIC20.66■□□□□ 0.9
RAI2Q9Y5P3 CAMTA1-216ENST00000557126 486 ntTSL 2 BASIC20.66■□□□□ 0.9
RAI2Q9Y5P3 JADE2-211ENST00000612830 1251 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
RAI2Q9Y5P3 UBE2E3-201ENST00000392415 1347 ntAPPRIS P1 TSL 3 BASIC20.66■□□□□ 0.9
RAI2Q9Y5P3 MRPL40-201ENST00000333130 1387 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
RAI2Q9Y5P3 IKBIP-203ENST00000393042 1368 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
RAI2Q9Y5P3 FXYD3-203ENST00000435734 1467 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
RAI2Q9Y5P3 MKRN4P-201ENST00000444706 1521 ntBASIC20.66■□□□□ 0.9
RAI2Q9Y5P3 PTX4-203ENST00000447419 1516 ntAPPRIS ALT2 TSL 5 BASIC20.66■□□□□ 0.9
RAI2Q9Y5P3 TRABD-204ENST00000395829 1628 ntAPPRIS ALT2 TSL 5 BASIC20.66■□□□□ 0.9
RAI2Q9Y5P3 FGFRL1-203ENST00000504138 1663 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
RAI2Q9Y5P3 SCLY-201ENST00000254663 2562 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
RAI2Q9Y5P3 INAFM2-202ENST00000638170 3052 ntAPPRIS P1 BASIC20.66■□□□□ 0.9
RAI2Q9Y5P3 NRXN2-203ENST00000377551 6373 ntAPPRIS P3 TSL 1 (best) BASIC20.65■□□□□ 0.9
RAI2Q9Y5P3 CAMK2B-216ENST00000440254 2097 ntAPPRIS P4 TSL 1 (best) BASIC20.65■□□□□ 0.9
RAI2Q9Y5P3 ZNF821-202ENST00000425432 2000 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
RAI2Q9Y5P3 RRNAD1-202ENST00000368218 1802 ntAPPRIS ALT2 TSL 3 BASIC20.65■□□□□ 0.9
RAI2Q9Y5P3 EXTL3-213ENST00000523149 1779 ntTSL 5 BASIC20.65■□□□□ 0.9
RAI2Q9Y5P3 GPR162-203ENST00000428545 1610 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
RAI2Q9Y5P3 SMUG1-202ENST00000337581 1571 ntAPPRIS P1 TSL 2 BASIC20.65■□□□□ 0.9
RAI2Q9Y5P3 TSSC4-203ENST00000380996 1544 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
RAI2Q9Y5P3 UNC119-202ENST00000335765 1424 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
RAI2Q9Y5P3 CXorf40A-204ENST00000423421 1403 ntAPPRIS P3 TSL 1 (best) BASIC20.65■□□□□ 0.9
RAI2Q9Y5P3 KLHDC9-201ENST00000368011 1314 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
RAI2Q9Y5P3 GGTLC1-201ENST00000278765 974 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
RAI2Q9Y5P3 NFS1-201ENST00000306750 738 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
RAI2Q9Y5P3 AL355472.2-201ENST00000422958 438 ntBASIC20.65■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 18.9 ms