Protein–RNA interactions for Protein: Q9Y5E2

PCDHB7, Protocadherin beta-7, humanhuman

Predictions only

Length 793 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB7Q9Y5E2 METTL5-206ENST00000409965 880 ntAPPRIS P2 TSL 1 (best) BASIC22.12■■□□□ 1.13
PCDHB7Q9Y5E2 LINC00969-218ENST00000452844 583 ntTSL 3 BASIC22.12■■□□□ 1.13
PCDHB7Q9Y5E2 LINC00969-221ENST00000457233 1279 ntTSL 1 (best) BASIC22.12■■□□□ 1.13
PCDHB7Q9Y5E2 LY6E-205ENST00000519611 635 ntTSL 3 BASIC22.12■■□□□ 1.13
PCDHB7Q9Y5E2 LY6E-212ENST00000522024 868 ntAPPRIS P2 TSL 5 BASIC22.12■■□□□ 1.13
PCDHB7Q9Y5E2 AC122129.2-201ENST00000583598 466 ntTSL 5 BASIC22.12■■□□□ 1.13
PCDHB7Q9Y5E2 AL023875.1-201ENST00000640777 796 ntBASIC22.12■■□□□ 1.13
PCDHB7Q9Y5E2 DUSP9-201ENST00000342782 2433 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
PCDHB7Q9Y5E2 AKT2-206ENST00000392038 5300 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
PCDHB7Q9Y5E2 MAGIX-207ENST00000615915 1757 ntAPPRIS ALT2 TSL 2 BASIC22.12■■□□□ 1.13
PCDHB7Q9Y5E2 WHAMM-201ENST00000286760 5101 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
PCDHB7Q9Y5E2 KREMEN2-204ENST00000572045 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC22.12■■□□□ 1.13
PCDHB7Q9Y5E2 BCKDK-201ENST00000219794 2128 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
PCDHB7Q9Y5E2 BABAM1-213ENST00000601043 1366 ntAPPRIS P3 TSL 2 BASIC22.12■■□□□ 1.13
PCDHB7Q9Y5E2 DDAH1-205ENST00000539042 1519 ntAPPRIS P1 TSL 5 BASIC22.11■■□□□ 1.13
PCDHB7Q9Y5E2 AMZ1-202ENST00000407112 1862 ntTSL 2 BASIC22.11■■□□□ 1.13
PCDHB7Q9Y5E2 RANBP10-202ENST00000448631 2232 ntTSL 2 BASIC22.11■■□□□ 1.13
PCDHB7Q9Y5E2 MRPL4-202ENST00000307422 1320 ntAPPRIS P2 TSL 5 BASIC22.11■■□□□ 1.13
PCDHB7Q9Y5E2 ECE2-202ENST00000357474 2667 ntTSL 1 (best) BASIC22.11■■□□□ 1.13
PCDHB7Q9Y5E2 C11orf86-201ENST00000308963 1187 ntAPPRIS P1 TSL 2 BASIC22.11■■□□□ 1.13
PCDHB7Q9Y5E2 LYPD1-201ENST00000345008 1033 ntTSL 1 (best) BASIC22.11■■□□□ 1.13
PCDHB7Q9Y5E2 H3F3A-204ENST00000366816 799 ntAPPRIS P1 TSL 3 BASIC22.11■■□□□ 1.13
PCDHB7Q9Y5E2 P2RY2-203ENST00000393597 2107 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
PCDHB7Q9Y5E2 A3GALT2-201ENST00000442999 1023 ntAPPRIS P1 TSL 5 BASIC22.11■■□□□ 1.13
PCDHB7Q9Y5E2 TNFRSF18-204ENST00000486728 727 ntAPPRIS ALT2 TSL 1 (best) BASIC22.11■■□□□ 1.13
PCDHB7Q9Y5E2 DEUP1-206ENST00000530273 410 ntTSL 3 BASIC22.11■■□□□ 1.13
PCDHB7Q9Y5E2 FBXO17-202ENST00000595329 1299 ntAPPRIS P1 TSL 2 BASIC22.11■■□□□ 1.13
PCDHB7Q9Y5E2 LAYN-201ENST00000375614 2066 ntAPPRIS P3 TSL 1 (best) BASIC22.11■■□□□ 1.13
PCDHB7Q9Y5E2 ACSF2-203ENST00000502667 2098 ntTSL 2 BASIC22.11■■□□□ 1.13
PCDHB7Q9Y5E2 AFDN-AS1-201ENST00000359760 2238 ntTSL 1 (best) BASIC22.11■■□□□ 1.13
PCDHB7Q9Y5E2 PPP1R3F-203ENST00000466508 1885 ntTSL 2 BASIC22.11■■□□□ 1.13
PCDHB7Q9Y5E2 CDC42SE2-206ENST00000503291 2025 ntTSL 1 (best) BASIC22.11■■□□□ 1.13
PCDHB7Q9Y5E2 DTNB-210ENST00000407186 2275 ntTSL 5 BASIC22.1■■□□□ 1.13
PCDHB7Q9Y5E2 TMEM25-205ENST00000411589 2442 ntAPPRIS ALT2 TSL 2 BASIC22.1■■□□□ 1.13
PCDHB7Q9Y5E2 SLC35A3-204ENST00000427993 2062 ntAPPRIS P1 TSL 5 BASIC22.1■■□□□ 1.13
PCDHB7Q9Y5E2 COX7A2L-201ENST00000234301 1112 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
PCDHB7Q9Y5E2 FAM98C-201ENST00000252530 1271 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
PCDHB7Q9Y5E2 LRR1-202ENST00000318317 957 ntTSL 1 (best) BASIC22.1■■□□□ 1.13
PCDHB7Q9Y5E2 NBL1-202ENST00000375136 2172 ntAPPRIS P3 TSL 1 (best) BASIC22.1■■□□□ 1.13
PCDHB7Q9Y5E2 ISG20-210ENST00000560741 800 ntAPPRIS P1 TSL 5 BASIC22.1■■□□□ 1.13
PCDHB7Q9Y5E2 TSPAN3-210ENST00000561277 1592 ntTSL 5 BASIC22.1■■□□□ 1.13
PCDHB7Q9Y5E2 PTCRA-204ENST00000616441 1125 ntAPPRIS ALT2 TSL 2 BASIC22.1■■□□□ 1.13
PCDHB7Q9Y5E2 PCSK6-218ENST00000619160 3093 ntAPPRIS ALT2 TSL 1 (best) BASIC22.1■■□□□ 1.13
PCDHB7Q9Y5E2 TMEM235-205ENST00000586400 2272 ntTSL 1 (best) BASIC22.1■■□□□ 1.13
PCDHB7Q9Y5E2 MAMSTR-202ENST00000356751 1825 ntTSL 2 BASIC22.1■■□□□ 1.13
PCDHB7Q9Y5E2 KRT19-201ENST00000361566 1390 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
PCDHB7Q9Y5E2 PPP3CC-203ENST00000397775 2094 ntTSL 2 BASIC22.1■■□□□ 1.13
PCDHB7Q9Y5E2 GORASP1-220ENST00000479927 1345 ntTSL 2 BASIC22.09■■□□□ 1.13
PCDHB7Q9Y5E2 RNF8-204ENST00000469731 1800 ntTSL 5 BASIC22.09■■□□□ 1.13
PCDHB7Q9Y5E2 DMRT1-201ENST00000382276 2222 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
PCDHB7Q9Y5E2 RAC3-201ENST00000306897 1090 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
PCDHB7Q9Y5E2 ARMC4P1-202ENST00000576034 643 ntTSL 2 BASIC22.09■■□□□ 1.13
PCDHB7Q9Y5E2 CIRBP-213ENST00000587323 1092 ntTSL 5 BASIC22.09■■□□□ 1.13
PCDHB7Q9Y5E2 FAM98C-205ENST00000588262 826 ntTSL 1 (best) BASIC22.09■■□□□ 1.13
PCDHB7Q9Y5E2 AC124016.1-201ENST00000609552 612 ntBASIC22.09■■□□□ 1.13
PCDHB7Q9Y5E2 FSCN2-202ENST00000417245 1665 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
PCDHB7Q9Y5E2 RHBDD3-201ENST00000216085 1794 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
PCDHB7Q9Y5E2 ANAPC1P1-202ENST00000616781 1771 ntTSL 1 (best) BASIC22.09■■□□□ 1.13
PCDHB7Q9Y5E2 HOMER1-202ENST00000334082 5881 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
PCDHB7Q9Y5E2 BZW1-209ENST00000452790 1473 ntTSL 2 BASIC22.09■■□□□ 1.13
PCDHB7Q9Y5E2 DKK3-203ENST00000525493 1326 ntTSL 2 BASIC22.08■■□□□ 1.13
PCDHB7Q9Y5E2 PPP1R36-201ENST00000298705 1405 ntAPPRIS P2 TSL 1 (best) BASIC22.08■■□□□ 1.13
PCDHB7Q9Y5E2 ST3GAL4-201ENST00000227495 1790 ntAPPRIS P3 TSL 5 BASIC22.08■■□□□ 1.13
PCDHB7Q9Y5E2 ARRB2-202ENST00000346341 1769 ntTSL 2 BASIC22.08■■□□□ 1.13
PCDHB7Q9Y5E2 EIF2B4-211ENST00000616081 1754 ntTSL 5 BASIC22.08■■□□□ 1.13
PCDHB7Q9Y5E2 TCEAL6-202ENST00000372774 1106 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
PCDHB7Q9Y5E2 RER1-204ENST00000378518 522 ntTSL 3 BASIC22.08■■□□□ 1.13
PCDHB7Q9Y5E2 AC239809.2-201ENST00000415381 517 ntBASIC22.08■■□□□ 1.13
PCDHB7Q9Y5E2 BNIP3L-204ENST00000520409 739 ntTSL 2 BASIC22.08■■□□□ 1.13
PCDHB7Q9Y5E2 SIVA1-203ENST00000535554 1244 ntAPPRIS ALT1 TSL 2 BASIC22.08■■□□□ 1.13
PCDHB7Q9Y5E2 OPA3-203ENST00000544371 1146 ntTSL 2 BASIC22.08■■□□□ 1.13
PCDHB7Q9Y5E2 AC090877.2-202ENST00000560363 574 ntTSL 2 BASIC22.08■■□□□ 1.13
PCDHB7Q9Y5E2 AC027682.2-201ENST00000563083 336 ntTSL 5 BASIC22.08■■□□□ 1.13
PCDHB7Q9Y5E2 ATAD3A-203ENST00000378756 2492 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
PCDHB7Q9Y5E2 GABBR2-201ENST00000259455 5788 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.12
PCDHB7Q9Y5E2 ADRM1-201ENST00000253003 1478 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.12
PCDHB7Q9Y5E2 ATG4D-201ENST00000309469 1949 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.12
PCDHB7Q9Y5E2 PLA2G15-202ENST00000413021 1346 ntTSL 2 BASIC22.07■■□□□ 1.12
PCDHB7Q9Y5E2 REPS2-202ENST00000357277 7953 ntAPPRIS P3 TSL 1 (best) BASIC22.07■■□□□ 1.12
PCDHB7Q9Y5E2 MOK-233ENST00000524214 1539 ntTSL 2 BASIC22.07■■□□□ 1.12
PCDHB7Q9Y5E2 DOK3-202ENST00000357198 1729 ntTSL 2 BASIC22.07■■□□□ 1.12
PCDHB7Q9Y5E2 RNH1-206ENST00000438658 1725 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
PCDHB7Q9Y5E2 MDFI-202ENST00000373050 809 ntTSL 2 BASIC22.07■■□□□ 1.12
PCDHB7Q9Y5E2 RPS2P55-201ENST00000397318 883 ntBASIC22.07■■□□□ 1.12
PCDHB7Q9Y5E2 AL390719.1-201ENST00000427998 977 ntTSL 1 (best) BASIC22.07■■□□□ 1.12
PCDHB7Q9Y5E2 GXYLT1P3-201ENST00000453058 1193 ntBASIC22.07■■□□□ 1.12
PCDHB7Q9Y5E2 AC133681.1-201ENST00000465482 601 ntBASIC22.07■■□□□ 1.12
PCDHB7Q9Y5E2 HOXB-AS3-204ENST00000466037 522 ntTSL 3 BASIC22.07■■□□□ 1.12
PCDHB7Q9Y5E2 AC107956.1-201ENST00000494359 873 ntBASIC22.07■■□□□ 1.12
PCDHB7Q9Y5E2 EPHA5-AS1-202ENST00000509473 1177 ntTSL 1 (best) BASIC22.07■■□□□ 1.12
PCDHB7Q9Y5E2 TK2-204ENST00000525974 1178 ntTSL 2 BASIC22.07■■□□□ 1.12
PCDHB7Q9Y5E2 AC073912.3-201ENST00000624414 853 ntBASIC22.07■■□□□ 1.12
PCDHB7Q9Y5E2 REST-211ENST00000640168 1268 ntTSL 1 (best) BASIC22.07■■□□□ 1.12
PCDHB7Q9Y5E2 DBNDD2-206ENST00000372720 1481 ntTSL 1 (best) BASIC22.07■■□□□ 1.12
PCDHB7Q9Y5E2 SMURF1-201ENST00000361125 5737 ntTSL 1 (best) BASIC22.07■■□□□ 1.12
PCDHB7Q9Y5E2 UPF3A-201ENST00000351487 2235 ntTSL 1 (best) BASIC22.07■■□□□ 1.12
PCDHB7Q9Y5E2 GATA3-AS1-201ENST00000355358 2214 ntTSL 2 BASIC22.07■■□□□ 1.12
PCDHB7Q9Y5E2 CERKL-201ENST00000339098 1677 ntAPPRIS P3 TSL 1 (best) BASIC22.07■■□□□ 1.12
PCDHB7Q9Y5E2 HOXD1-201ENST00000331462 1975 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
PCDHB7Q9Y5E2 NPAS1-201ENST00000439365 1341 ntTSL 2 BASIC22.06■■□□□ 1.12
Retrieved 100 of 98,524 protein–RNA pairs in 23.2 ms