Protein–RNA interactions for Protein: Q9Y2X8

UBE2D4, Ubiquitin-conjugating enzyme E2 D4, humanhuman

Predictions only

Length 147 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D4Q9Y2X8 OTUB1-212ENST00000543988 1259 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
UBE2D4Q9Y2X8 RPRD1A-207ENST00000588737 1264 ntTSL 2 BASIC14.22□□□□□ -0.13
UBE2D4Q9Y2X8 AL445237.1-202ENST00000604581 425 ntTSL 5 BASIC14.22□□□□□ -0.13
UBE2D4Q9Y2X8 FXYD3-203ENST00000435734 1467 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
UBE2D4Q9Y2X8 NAB2-201ENST00000300131 2711 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
UBE2D4Q9Y2X8 PUS1-203ENST00000443358 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
UBE2D4Q9Y2X8 KIAA1324L-208ENST00000450689 6841 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
UBE2D4Q9Y2X8 FAM129C-205ENST00000595684 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
UBE2D4Q9Y2X8 GTPBP3-222ENST00000600625 2493 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
UBE2D4Q9Y2X8 RIMBP3B-201ENST00000620804 6105 ntAPPRIS P1 BASIC14.22□□□□□ -0.13
UBE2D4Q9Y2X8 LPAR2-203ENST00000586703 1823 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
UBE2D4Q9Y2X8 BRPF3-202ENST00000357641 6052 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
UBE2D4Q9Y2X8 FBXO31-201ENST00000311635 5934 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
UBE2D4Q9Y2X8 DPF1-203ENST00000414789 1960 ntTSL 2 BASIC14.22□□□□□ -0.13
UBE2D4Q9Y2X8 BEAN1-202ENST00000536005 1988 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
UBE2D4Q9Y2X8 THOC3-201ENST00000265097 1589 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
UBE2D4Q9Y2X8 PHOSPHO1-206ENST00000514112 1587 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
UBE2D4Q9Y2X8 AP000547.3-201ENST00000592918 1576 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
UBE2D4Q9Y2X8 FBXL17-205ENST00000542267 5188 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
UBE2D4Q9Y2X8 KCNN2-207ENST00000610748 2091 ntTSL 3 BASIC14.21□□□□□ -0.13
UBE2D4Q9Y2X8 AP003356.1-202ENST00000517910 2770 ntTSL 2 BASIC14.21□□□□□ -0.13
UBE2D4Q9Y2X8 ZNF511-201ENST00000359035 2004 ntTSL 2 BASIC14.21□□□□□ -0.13
UBE2D4Q9Y2X8 NPNT-214ENST00000514622 2362 ntTSL 2 BASIC14.21□□□□□ -0.13
UBE2D4Q9Y2X8 TMPRSS5-202ENST00000536856 1811 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
UBE2D4Q9Y2X8 SCO2-201ENST00000252785 992 ntAPPRIS P1 TSL 2 BASIC14.21□□□□□ -0.13
UBE2D4Q9Y2X8 LYPD2-201ENST00000359228 594 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
UBE2D4Q9Y2X8 FAM219A-202ENST00000379078 770 ntTSL 3 BASIC14.21□□□□□ -0.13
UBE2D4Q9Y2X8 TYROBP-203ENST00000544690 522 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
UBE2D4Q9Y2X8 FP565260.3-201ENST00000612610 1162 ntAPPRIS P5 TSL 1 (best) BASIC14.21□□□□□ -0.13
UBE2D4Q9Y2X8 POLD2-202ENST00000406581 2158 ntAPPRIS P1 TSL 2 BASIC14.21□□□□□ -0.13
UBE2D4Q9Y2X8 DPF1-201ENST00000355526 1632 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
UBE2D4Q9Y2X8 TREX2-202ENST00000334497 1982 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
UBE2D4Q9Y2X8 NBL1-209ENST00000548815 1953 ntAPPRIS P3 TSL 3 BASIC14.21□□□□□ -0.13
UBE2D4Q9Y2X8 ASCC1-205ENST00000394919 2683 ntAPPRIS P1 TSL 2 BASIC14.21□□□□□ -0.13
UBE2D4Q9Y2X8 SSTR3-202ENST00000617123 1781 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
UBE2D4Q9Y2X8 TOLLIP-201ENST00000263646 2283 ntTSL 5 BASIC14.21□□□□□ -0.14
UBE2D4Q9Y2X8 UBXN6-201ENST00000301281 1943 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
UBE2D4Q9Y2X8 CNEP1R1-203ENST00000458059 2965 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
UBE2D4Q9Y2X8 PI4KB-213ENST00000529142 2603 ntTSL 2 BASIC14.21□□□□□ -0.14
UBE2D4Q9Y2X8 AC008073.3-201ENST00000610442 2281 ntAPPRIS P1 TSL 2 BASIC14.21□□□□□ -0.14
UBE2D4Q9Y2X8 PLCB2-204ENST00000557821 4517 ntAPPRIS ALT1 TSL 1 (best) BASIC14.21□□□□□ -0.14
UBE2D4Q9Y2X8 PON1-201ENST00000222381 2568 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
UBE2D4Q9Y2X8 ENOSF1-201ENST00000251101 1867 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
UBE2D4Q9Y2X8 FBLN1-204ENST00000402984 2355 ntTSL 5 BASIC14.2□□□□□ -0.14
UBE2D4Q9Y2X8 GORAB-201ENST00000367762 1699 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
UBE2D4Q9Y2X8 KCNC2-204ENST00000540018 2168 ntAPPRIS ALT2 TSL 2 BASIC14.2□□□□□ -0.14
UBE2D4Q9Y2X8 C3orf18-203ENST00000426034 2486 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
UBE2D4Q9Y2X8 RAB11FIP4-201ENST00000394744 1968 ntTSL 2 BASIC14.2□□□□□ -0.14
UBE2D4Q9Y2X8 H2AFX-202ENST00000530167 1614 ntAPPRIS P1 BASIC14.2□□□□□ -0.14
UBE2D4Q9Y2X8 PRSS33-204ENST00000576886 1755 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
UBE2D4Q9Y2X8 PDE4DIP-214ENST00000479408 2746 ntTSL 5 BASIC14.2□□□□□ -0.14
UBE2D4Q9Y2X8 APAF1-210ENST00000551964 5444 ntAPPRIS P4 TSL 1 (best) BASIC14.2□□□□□ -0.14
UBE2D4Q9Y2X8 PRKCZ-AS1-201ENST00000333854 1253 ntTSL 2 BASIC14.2□□□□□ -0.14
UBE2D4Q9Y2X8 ANAPC13-201ENST00000354910 1209 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
UBE2D4Q9Y2X8 AC055876.1-201ENST00000430589 895 ntTSL 2 BASIC14.2□□□□□ -0.14
UBE2D4Q9Y2X8 AC068580.1-201ENST00000446489 252 ntTSL 3 BASIC14.2□□□□□ -0.14
UBE2D4Q9Y2X8 ZNF846-212ENST00000592859 1206 ntTSL 2 BASIC14.2□□□□□ -0.14
UBE2D4Q9Y2X8 HRH3-203ENST00000611492 900 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
UBE2D4Q9Y2X8 MADCAM1-208ENST00000621286 1203 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
UBE2D4Q9Y2X8 UBE2B-201ENST00000265339 2515 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
UBE2D4Q9Y2X8 RREB1-203ENST00000379933 5826 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
UBE2D4Q9Y2X8 RASSF7-204ENST00000431809 1745 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
UBE2D4Q9Y2X8 OTUB1-209ENST00000538426 1729 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
UBE2D4Q9Y2X8 TAF7-201ENST00000313368 2334 ntAPPRIS P1 BASIC14.2□□□□□ -0.14
UBE2D4Q9Y2X8 STAU2-229ENST00000524300 3065 ntAPPRIS P4 TSL 2 BASIC14.2□□□□□ -0.14
UBE2D4Q9Y2X8 TMEM121-202ENST00000431372 1519 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
UBE2D4Q9Y2X8 DMPK-203ENST00000354227 1982 ntTSL 2 BASIC14.2□□□□□ -0.14
UBE2D4Q9Y2X8 ENTPD8-201ENST00000344119 2111 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
UBE2D4Q9Y2X8 NRL-206ENST00000561028 2103 ntAPPRIS P1 TSL 2 BASIC14.2□□□□□ -0.14
UBE2D4Q9Y2X8 SLC39A4-201ENST00000276833 2297 ntTSL 2 BASIC14.2□□□□□ -0.14
UBE2D4Q9Y2X8 LMLN-204ENST00000420910 2423 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
UBE2D4Q9Y2X8 KLHDC10-201ENST00000335420 6437 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
UBE2D4Q9Y2X8 CPAMD8-202ENST00000388925 5355 ntTSL 5 BASIC14.19□□□□□ -0.14
UBE2D4Q9Y2X8 SDHA-201ENST00000264932 2390 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
UBE2D4Q9Y2X8 DPH1-201ENST00000263083 2221 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
UBE2D4Q9Y2X8 NCLN-205ENST00000590671 2070 ntTSL 2 BASIC14.19□□□□□ -0.14
UBE2D4Q9Y2X8 RNF224-201ENST00000445101 1798 ntAPPRIS P1 TSL 3 BASIC14.19□□□□□ -0.14
UBE2D4Q9Y2X8 ZNF12-201ENST00000342651 2921 ntAPPRIS ALT2 TSL 2 BASIC14.19□□□□□ -0.14
UBE2D4Q9Y2X8 TMEM235-202ENST00000421688 2490 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
UBE2D4Q9Y2X8 C2orf54-201ENST00000307486 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
UBE2D4Q9Y2X8 RETREG2-203ENST00000430297 4618 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
UBE2D4Q9Y2X8 AC087289.5-201ENST00000586076 3175 ntBASIC14.19□□□□□ -0.14
UBE2D4Q9Y2X8 LAG3-202ENST00000441671 1576 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
UBE2D4Q9Y2X8 PRADC1-201ENST00000258083 1083 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
UBE2D4Q9Y2X8 UNC93B3-201ENST00000308076 687 ntBASIC14.19□□□□□ -0.14
UBE2D4Q9Y2X8 DCTPP1-201ENST00000319285 1222 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
UBE2D4Q9Y2X8 MAD2L2-204ENST00000376667 872 ntAPPRIS P1 TSL 2 BASIC14.19□□□□□ -0.14
UBE2D4Q9Y2X8 HES6-202ENST00000409002 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
UBE2D4Q9Y2X8 ITGA9-AS1-210ENST00000457661 738 ntTSL 4 BASIC14.19□□□□□ -0.14
UBE2D4Q9Y2X8 MPST-208ENST00000628507 698 ntTSL 5 BASIC14.19□□□□□ -0.14
UBE2D4Q9Y2X8 APOC3-205ENST00000630701 541 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
UBE2D4Q9Y2X8 CHP2-201ENST00000300113 2382 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
UBE2D4Q9Y2X8 ZNF281-202ENST00000367352 2933 ntAPPRIS ALT2 TSL 2 BASIC14.19□□□□□ -0.14
UBE2D4Q9Y2X8 MFF-207ENST00000409565 1548 ntTSL 2 BASIC14.19□□□□□ -0.14
UBE2D4Q9Y2X8 MEIS3-212ENST00000561293 1918 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
UBE2D4Q9Y2X8 CLINT1-207ENST00000523908 2346 ntAPPRIS ALT1 TSL 1 (best) BASIC14.19□□□□□ -0.14
UBE2D4Q9Y2X8 C19orf25-202ENST00000436106 2403 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
UBE2D4Q9Y2X8 STIM2-211ENST00000639195 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
UBE2D4Q9Y2X8 TXNRD2-203ENST00000400519 3155 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
UBE2D4Q9Y2X8 SPNS1-201ENST00000311008 2208 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 24 ms