Protein–RNA interactions for Protein: Q9XRX5

HHLA3, HERV-H LTR-associating protein 3, humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HHLA3Q9XRX5 ADAM9-203ENST00000466936 2053 ntTSL 2 BASIC14.92□□□□□ -0.02
HHLA3Q9XRX5 PRR14-202ENST00000300835 2198 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
HHLA3Q9XRX5 EML2-220ENST00000589876 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
HHLA3Q9XRX5 SCARB1-201ENST00000261693 2611 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
HHLA3Q9XRX5 DNAAF3-202ENST00000455045 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
HHLA3Q9XRX5 AC098818.2-201ENST00000564925 2320 ntBASIC14.92□□□□□ -0.02
HHLA3Q9XRX5 WWTR1-AS1-202ENST00000479752 1700 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
HHLA3Q9XRX5 KCNH6-203ENST00000580652 1703 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
HHLA3Q9XRX5 PQLC2-201ENST00000375153 2153 ntAPPRIS P1 TSL 2 BASIC14.91□□□□□ -0.02
HHLA3Q9XRX5 TCAIM-203ENST00000396078 2178 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
HHLA3Q9XRX5 FBXO24-202ENST00000427939 2087 ntTSL 2 BASIC14.91□□□□□ -0.02
HHLA3Q9XRX5 FUT5-202ENST00000588525 1988 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
HHLA3Q9XRX5 ASPG-201ENST00000546892 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
HHLA3Q9XRX5 COPS7A-222ENST00000626119 1768 ntTSL 3 BASIC14.91□□□□□ -0.02
HHLA3Q9XRX5 DHRS2-202ENST00000344777 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
HHLA3Q9XRX5 CBWD3-202ENST00000377342 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
HHLA3Q9XRX5 HSD11B1L-201ENST00000301382 1457 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
HHLA3Q9XRX5 MPST-205ENST00000404802 1453 ntAPPRIS P1 TSL 3 BASIC14.91□□□□□ -0.02
HHLA3Q9XRX5 MRPL14-201ENST00000372014 959 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
HHLA3Q9XRX5 ASMT-202ENST00000381233 989 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
HHLA3Q9XRX5 AC123595.1-201ENST00000440769 1046 ntBASIC14.91□□□□□ -0.02
HHLA3Q9XRX5 AC079140.4-201ENST00000507448 529 ntBASIC14.91□□□□□ -0.02
HHLA3Q9XRX5 AL138963.3-201ENST00000610057 588 ntTSL 4 BASIC14.91□□□□□ -0.02
HHLA3Q9XRX5 CHRNB1-201ENST00000306071 2557 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
HHLA3Q9XRX5 C10orf91-202ENST00000392630 1846 ntTSL 2 BASIC14.91□□□□□ -0.02
HHLA3Q9XRX5 FAM3A-202ENST00000359889 1712 ntAPPRIS P1 TSL 2 BASIC14.91□□□□□ -0.02
HHLA3Q9XRX5 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC14.91□□□□□ -0.02
HHLA3Q9XRX5 ZNF324B-202ENST00000545523 2368 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
HHLA3Q9XRX5 MFF-207ENST00000409565 1548 ntTSL 2 BASIC14.91□□□□□ -0.02
HHLA3Q9XRX5 VRK2-201ENST00000340157 1888 ntAPPRIS P3 TSL 1 (best) BASIC14.91□□□□□ -0.02
HHLA3Q9XRX5 CDC14A-203ENST00000370124 1883 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
HHLA3Q9XRX5 PDCD2-203ENST00000443345 1897 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
HHLA3Q9XRX5 ILKAP-211ENST00000612675 1335 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
HHLA3Q9XRX5 S1PR5-201ENST00000333430 2341 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
HHLA3Q9XRX5 C1orf198-201ENST00000366663 3858 ntAPPRIS P3 TSL 1 (best) BASIC14.91□□□□□ -0.02
HHLA3Q9XRX5 FFAR3-201ENST00000327809 1796 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
HHLA3Q9XRX5 MAF1-205ENST00000534585 1754 ntTSL 5 BASIC14.9□□□□□ -0.02
HHLA3Q9XRX5 DYM-203ENST00000442713 2147 ntTSL 2 BASIC14.9□□□□□ -0.02
HHLA3Q9XRX5 NECTIN1-201ENST00000264025 5840 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
HHLA3Q9XRX5 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
HHLA3Q9XRX5 GAS6-201ENST00000327773 2490 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
HHLA3Q9XRX5 NUDT16L1-202ENST00000405142 2040 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
HHLA3Q9XRX5 RGMA-210ENST00000557301 1929 ntAPPRIS ALT2 TSL 2 BASIC14.9□□□□□ -0.02
HHLA3Q9XRX5 CHRNA10-204ENST00000534359 1474 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
HHLA3Q9XRX5 NGEF-202ENST00000373552 2286 ntAPPRIS P1 TSL 2 BASIC14.9□□□□□ -0.02
HHLA3Q9XRX5 FARSA-201ENST00000314606 1814 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
HHLA3Q9XRX5 CEP78-202ENST00000376597 2618 ntAPPRIS P4 TSL 1 (best) BASIC14.9□□□□□ -0.02
HHLA3Q9XRX5 ADAP1-216ENST00000539900 2178 ntTSL 2 BASIC14.9□□□□□ -0.02
HHLA3Q9XRX5 GSG1L-202ENST00000395724 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
HHLA3Q9XRX5 GPR35-204ENST00000430267 1399 ntAPPRIS ALT2 TSL 5 BASIC14.9□□□□□ -0.02
HHLA3Q9XRX5 NOP14-202ENST00000398071 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
HHLA3Q9XRX5 PRPF39-201ENST00000355765 2868 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
HHLA3Q9XRX5 DGKZ-203ENST00000421244 2862 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
HHLA3Q9XRX5 BRD4-202ENST00000360016 3240 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
HHLA3Q9XRX5 PAIP1-201ENST00000306846 2782 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
HHLA3Q9XRX5 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
HHLA3Q9XRX5 FNDC3B-204ENST00000421757 946 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
HHLA3Q9XRX5 YBX1P1-201ENST00000445822 960 ntBASIC14.9□□□□□ -0.02
HHLA3Q9XRX5 GLI4-210ENST00000523522 1297 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
HHLA3Q9XRX5 AL137779.2-201ENST00000554859 448 ntTSL 2 BASIC14.9□□□□□ -0.02
HHLA3Q9XRX5 AP003071.3-201ENST00000562506 366 ntTSL 3 BASIC14.9□□□□□ -0.02
HHLA3Q9XRX5 AC145207.2-202ENST00000576554 565 ntTSL 5 BASIC14.9□□□□□ -0.02
HHLA3Q9XRX5 SP2-202ENST00000613139 908 ntTSL 5 BASIC14.9□□□□□ -0.02
HHLA3Q9XRX5 DACT2-203ENST00000607983 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
HHLA3Q9XRX5 RFXAP-201ENST00000255476 2304 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
HHLA3Q9XRX5 RIPPLY3-201ENST00000329553 2235 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
HHLA3Q9XRX5 GLS-201ENST00000320717 4834 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
HHLA3Q9XRX5 C16orf58-202ENST00000430477 2471 ntAPPRIS P2 TSL 1 (best) BASIC14.9□□□□□ -0.02
HHLA3Q9XRX5 GAL3ST3-201ENST00000312006 2133 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
HHLA3Q9XRX5 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC14.9□□□□□ -0.02
HHLA3Q9XRX5 KCNH2-201ENST00000262186 4286 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
HHLA3Q9XRX5 RASD1-202ENST00000579152 1404 ntTSL 2 BASIC14.9□□□□□ -0.02
HHLA3Q9XRX5 DOCK9-206ENST00000427887 4176 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
HHLA3Q9XRX5 TERF1-202ENST00000276603 1677 ntAPPRIS P4 TSL 1 (best) BASIC14.9□□□□□ -0.02
HHLA3Q9XRX5 LRRC3B-201ENST00000396641 1696 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
HHLA3Q9XRX5 CXCL16-203ENST00000574412 1668 ntAPPRIS P2 TSL 1 (best) BASIC14.9□□□□□ -0.02
HHLA3Q9XRX5 AC026362.1-201ENST00000540866 5618 ntTSL 2 BASIC14.9□□□□□ -0.02
HHLA3Q9XRX5 C5orf47-201ENST00000340147 2522 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
HHLA3Q9XRX5 EPO-201ENST00000252723 1330 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
HHLA3Q9XRX5 SLC6A11-202ENST00000454147 2794 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
HHLA3Q9XRX5 UHRF1-203ENST00000615884 2651 ntAPPRIS P1 TSL 2 BASIC14.89□□□□□ -0.03
HHLA3Q9XRX5 CD55-205ENST00000367067 1843 ntAPPRIS ALT2 TSL 5 BASIC14.89□□□□□ -0.03
HHLA3Q9XRX5 EPHA8-202ENST00000374644 1802 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
HHLA3Q9XRX5 FAHD1-202ENST00000382668 1845 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
HHLA3Q9XRX5 FEZF1-203ENST00000442488 2099 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
HHLA3Q9XRX5 ACTR5-201ENST00000243903 2565 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
HHLA3Q9XRX5 NR2F2-204ENST00000453270 1712 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
HHLA3Q9XRX5 MAP7D2-203ENST00000443379 2476 ntAPPRIS ALT2 TSL 2 BASIC14.89□□□□□ -0.03
HHLA3Q9XRX5 MYO15B-232ENST00000610510 9195 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
HHLA3Q9XRX5 OIP5-AS1-202ENST00000501665 1384 ntTSL 2 BASIC14.89□□□□□ -0.03
HHLA3Q9XRX5 NRL-206ENST00000561028 2103 ntAPPRIS P1 TSL 2 BASIC14.89□□□□□ -0.03
HHLA3Q9XRX5 SPAG16-204ENST00000413312 2258 ntTSL 5 BASIC14.89□□□□□ -0.03
HHLA3Q9XRX5 TBC1D9-201ENST00000442267 5306 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
HHLA3Q9XRX5 ZSWIM8-220ENST00000604524 5465 ntTSL 5 BASIC14.89□□□□□ -0.03
HHLA3Q9XRX5 PHLDA3-201ENST00000367309 896 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
HHLA3Q9XRX5 CCDC160-201ENST00000370809 1299 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
HHLA3Q9XRX5 EIF6-201ENST00000374436 1252 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
HHLA3Q9XRX5 ITPKB-203ENST00000429204 6162 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
HHLA3Q9XRX5 ECHDC2-221ENST00000536120 1446 ntTSL 3 BASIC14.89□□□□□ -0.03
HHLA3Q9XRX5 CHD1L-201ENST00000361293 2484 ntTSL 2 BASIC14.89□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 17.8 ms