Protein–RNA interactions for Protein: Q9UQ88

CDK11A, Cyclin-dependent kinase 11A, humanhuman

Predicted RBP Predictions only

Length 783 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK11AQ9UQ88 CDC42SE2-206ENST00000503291 2025 ntTSL 1 (best) BASIC31.82■■■□□ 2.68
CDK11AQ9UQ88 LIME1-201ENST00000309546 1178 ntAPPRIS P3 TSL 1 (best) BASIC31.82■■■□□ 2.68
CDK11AQ9UQ88 DMRT2-206ENST00000412350 1244 ntTSL 1 (best) BASIC31.82■■■□□ 2.68
CDK11AQ9UQ88 TSPAN14-209ENST00000481124 808 ntTSL 2 BASIC31.82■■■□□ 2.68
CDK11AQ9UQ88 CXCL2-202ENST00000508487 1218 ntAPPRIS P1 TSL 1 (best) BASIC31.82■■■□□ 2.68
CDK11AQ9UQ88 CIRBP-213ENST00000587323 1092 ntTSL 5 BASIC31.82■■■□□ 2.68
CDK11AQ9UQ88 ADRM1-201ENST00000253003 1478 ntAPPRIS P1 TSL 1 (best) BASIC31.82■■■□□ 2.68
CDK11AQ9UQ88 DBNDD2-206ENST00000372720 1481 ntTSL 1 (best) BASIC31.82■■■□□ 2.68
CDK11AQ9UQ88 ABHD6-201ENST00000295962 2393 ntAPPRIS P1 TSL 1 (best) BASIC31.82■■■□□ 2.68
CDK11AQ9UQ88 NTN4-207ENST00000553059 1818 ntTSL 1 (best) BASIC31.82■■■□□ 2.68
CDK11AQ9UQ88 FDFT1-209ENST00000525900 1596 ntTSL 5 BASIC31.81■■■□□ 2.68
CDK11AQ9UQ88 WDR37-203ENST00000381329 1307 ntTSL 1 (best) BASIC31.81■■■□□ 2.68
CDK11AQ9UQ88 AMZ1-202ENST00000407112 1862 ntTSL 2 BASIC31.81■■■□□ 2.68
CDK11AQ9UQ88 S1PR5-204ENST00000617721 1698 ntTSL 5 BASIC31.81■■■□□ 2.68
CDK11AQ9UQ88 AL390728.5-201ENST00000428687 706 ntTSL 3 BASIC31.81■■■□□ 2.68
CDK11AQ9UQ88 CAMLG-202ENST00000514518 895 ntTSL 1 (best) BASIC31.81■■■□□ 2.68
CDK11AQ9UQ88 CA3-AS1-201ENST00000517697 559 ntTSL 4 BASIC31.81■■■□□ 2.68
CDK11AQ9UQ88 RARRES2P10-201ENST00000564312 460 ntBASIC31.81■■■□□ 2.68
CDK11AQ9UQ88 NCBP2-AS2-201ENST00000602845 918 ntAPPRIS P1 BASIC31.81■■■□□ 2.68
CDK11AQ9UQ88 GNB1-210ENST00000615252 3048 ntTSL 5 BASIC31.81■■■□□ 2.68
CDK11AQ9UQ88 RNF19B-203ENST00000373456 2560 ntAPPRIS P3 TSL 1 (best) BASIC31.81■■■□□ 2.68
CDK11AQ9UQ88 TSSC4-207ENST00000451491 1423 ntAPPRIS P3 TSL 1 (best) BASIC31.81■■■□□ 2.68
CDK11AQ9UQ88 ST7-201ENST00000265437 2899 ntTSL 1 (best) BASIC31.81■■■□□ 2.68
CDK11AQ9UQ88 SEPT7-206ENST00000435235 1584 ntTSL 2 BASIC31.81■■■□□ 2.68
CDK11AQ9UQ88 RNH1-206ENST00000438658 1725 ntAPPRIS P1 TSL 1 (best) BASIC31.8■■■□□ 2.68
CDK11AQ9UQ88 ARL2-SNX15-201ENST00000301886 2392 ntAPPRIS P1 TSL 2 BASIC31.8■■■□□ 2.68
CDK11AQ9UQ88 IFI6-202ENST00000361157 841 ntAPPRIS ALT2 TSL 1 (best) BASIC31.8■■■□□ 2.68
CDK11AQ9UQ88 AC004882.1-201ENST00000416352 590 ntTSL 3 BASIC31.8■■■□□ 2.68
CDK11AQ9UQ88 DHDH-203ENST00000522614 776 ntTSL 5 BASIC31.8■■■□□ 2.68
CDK11AQ9UQ88 MIR4785-201ENST00000585005 73 ntBASIC31.8■■■□□ 2.68
CDK11AQ9UQ88 FLT3LG-211ENST00000600429 984 ntAPPRIS P1 TSL 1 (best) BASIC31.8■■■□□ 2.68
CDK11AQ9UQ88 ITGA4-202ENST00000339307 1403 ntTSL 1 (best) BASIC31.8■■■□□ 2.68
CDK11AQ9UQ88 MRGPRE-201ENST00000389832 1409 ntAPPRIS P1 TSL 2 BASIC31.8■■■□□ 2.68
CDK11AQ9UQ88 TOP2B-204ENST00000435706 5389 ntAPPRIS P3 TSL 1 (best) BASIC31.8■■■□□ 2.68
CDK11AQ9UQ88 ZSWIM7-201ENST00000399277 2008 ntAPPRIS P1 TSL 1 (best) BASIC31.8■■■□□ 2.68
CDK11AQ9UQ88 CASK-201ENST00000378154 2494 ntTSL 5 BASIC31.8■■■□□ 2.68
CDK11AQ9UQ88 SLAIN1-213ENST00000466548 2637 ntAPPRIS ALT2 TSL 5 BASIC31.79■■■□□ 2.68
CDK11AQ9UQ88 WDR37-206ENST00000620998 1303 ntTSL 5 BASIC31.79■■■□□ 2.68
CDK11AQ9UQ88 TSTD1-201ENST00000318289 626 ntAPPRIS P3 TSL 1 (best) BASIC31.79■■■□□ 2.68
CDK11AQ9UQ88 BSX-201ENST00000343035 830 ntAPPRIS P1 TSL 5 BASIC31.79■■■□□ 2.68
CDK11AQ9UQ88 PRKACA-209ENST00000590853 1101 ntTSL 5 BASIC31.79■■■□□ 2.68
CDK11AQ9UQ88 AC020922.2-201ENST00000596786 359 ntTSL 4 BASIC31.79■■■□□ 2.68
CDK11AQ9UQ88 CHST7-201ENST00000276055 2289 ntAPPRIS P1 TSL 1 (best) BASIC31.79■■■□□ 2.68
CDK11AQ9UQ88 SUPT4H1-202ENST00000577396 1643 ntTSL 2 BASIC31.78■■■□□ 2.68
CDK11AQ9UQ88 KREMEN2-204ENST00000572045 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC31.78■■■□□ 2.68
CDK11AQ9UQ88 AC005906.2-202ENST00000638821 2168 ntTSL 5 BASIC31.78■■■□□ 2.68
CDK11AQ9UQ88 DPH1-203ENST00000570477 1747 ntAPPRIS ALT2 TSL 2 BASIC31.78■■■□□ 2.68
CDK11AQ9UQ88 ME2-206ENST00000638410 2289 ntTSL 5 BASIC31.78■■■□□ 2.68
CDK11AQ9UQ88 ME2-210ENST00000639255 2262 ntTSL 5 BASIC31.78■■■□□ 2.68
CDK11AQ9UQ88 RPL13-202ENST00000393099 2385 ntAPPRIS P1 TSL 1 (best) BASIC31.78■■■□□ 2.68
CDK11AQ9UQ88 PTS-201ENST00000280362 935 ntAPPRIS P1 TSL 1 (best) BASIC31.78■■■□□ 2.68
CDK11AQ9UQ88 MOK-228ENST00000523231 1114 ntTSL 1 (best) BASIC31.78■■■□□ 2.68
CDK11AQ9UQ88 AC091551.1-201ENST00000590722 1228 ntAPPRIS P1 TSL 2 BASIC31.78■■■□□ 2.68
CDK11AQ9UQ88 ASRGL1-201ENST00000301776 2182 ntAPPRIS P1 TSL 1 (best) BASIC31.78■■■□□ 2.68
CDK11AQ9UQ88 GPR137B-202ENST00000366592 2042 ntAPPRIS P2 TSL 1 (best) BASIC31.78■■■□□ 2.68
CDK11AQ9UQ88 C16orf58-209ENST00000567994 1845 ntTSL 5 BASIC31.77■■■□□ 2.68
CDK11AQ9UQ88 IRX4-207ENST00000613726 2403 ntTSL 1 (best) BASIC31.77■■■□□ 2.68
CDK11AQ9UQ88 HOXC13-AS-201ENST00000512916 1408 ntTSL 3 BASIC31.77■■■□□ 2.68
CDK11AQ9UQ88 PGRMC2-201ENST00000296425 2767 ntAPPRIS P1 TSL 1 (best) BASIC31.77■■■□□ 2.68
CDK11AQ9UQ88 VKORC1-202ENST00000319788 1077 ntTSL 1 (best) BASIC31.77■■■□□ 2.68
CDK11AQ9UQ88 BCL7B-206ENST00000455335 985 ntTSL 3 BASIC31.77■■■□□ 2.68
CDK11AQ9UQ88 STXBP1-203ENST00000476182 566 ntTSL 5 BASIC31.77■■■□□ 2.68
CDK11AQ9UQ88 ADAMTS19-AS1-201ENST00000502827 786 ntTSL 4 BASIC31.77■■■□□ 2.68
CDK11AQ9UQ88 SLC52A2-211ENST00000532887 2147 ntAPPRIS P1 TSL 5 BASIC31.77■■■□□ 2.68
CDK11AQ9UQ88 CDKN2A-213ENST00000579122 666 ntTSL 3 BASIC31.77■■■□□ 2.68
CDK11AQ9UQ88 MAGI2-208ENST00000522391 4878 ntAPPRIS ALT2 TSL 5 BASIC31.77■■■□□ 2.68
CDK11AQ9UQ88 PEX10-202ENST00000447513 1997 ntAPPRIS P2 TSL 1 (best) BASIC31.77■■■□□ 2.68
CDK11AQ9UQ88 C18orf65-201ENST00000622985 2076 ntTSL 2 BASIC31.77■■■□□ 2.68
CDK11AQ9UQ88 DMRT2-209ENST00000635183 2190 ntTSL 5 BASIC31.77■■■□□ 2.68
CDK11AQ9UQ88 CD55-203ENST00000367063 1691 ntAPPRIS ALT2 TSL 1 (best) BASIC31.76■■■□□ 2.68
CDK11AQ9UQ88 NRG2-201ENST00000289409 2535 ntAPPRIS ALT2 TSL 5 BASIC31.76■■■□□ 2.68
CDK11AQ9UQ88 KIAA1522-201ENST00000294521 878 ntAPPRIS ALT2 TSL 2 BASIC31.76■■■□□ 2.67
CDK11AQ9UQ88 C5orf56-203ENST00000378953 942 ntAPPRIS ALT2 TSL 2 BASIC31.76■■■□□ 2.67
CDK11AQ9UQ88 POMC-202ENST00000380794 1295 ntAPPRIS P1 TSL 2 BASIC31.76■■■□□ 2.67
CDK11AQ9UQ88 AC136628.4-201ENST00000520758 535 ntTSL 2 BASIC31.76■■■□□ 2.67
CDK11AQ9UQ88 CNOT8-224ENST00000523698 862 ntTSL 2 BASIC31.76■■■□□ 2.67
CDK11AQ9UQ88 AL353593.2-202ENST00000602947 550 ntTSL 4 BASIC31.76■■■□□ 2.67
CDK11AQ9UQ88 AC113410.3-201ENST00000623366 203 ntBASIC31.76■■■□□ 2.67
CDK11AQ9UQ88 CABP2-204ENST00000636477 941 ntTSL 5 BASIC31.76■■■□□ 2.67
CDK11AQ9UQ88 LMAN2-201ENST00000303127 1800 ntAPPRIS P2 TSL 1 (best) BASIC31.76■■■□□ 2.67
CDK11AQ9UQ88 PGPEP1L-202ENST00000535714 1483 ntTSL 2 BASIC31.76■■■□□ 2.67
CDK11AQ9UQ88 WIPF1-205ENST00000409415 1772 ntTSL 1 (best) BASIC31.76■■■□□ 2.67
CDK11AQ9UQ88 SPOP-206ENST00000504102 1865 ntAPPRIS P1 TSL 1 (best) BASIC31.76■■■□□ 2.67
CDK11AQ9UQ88 POTEC-204ENST00000620346 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC31.76■■■□□ 2.67
CDK11AQ9UQ88 HSD11B1L-219ENST00000581893 1540 ntTSL 1 (best) BASIC31.75■■■□□ 2.67
CDK11AQ9UQ88 PBX4-201ENST00000251203 1724 ntAPPRIS P1 TSL 1 (best) BASIC31.75■■■□□ 2.67
CDK11AQ9UQ88 GFRA3-201ENST00000274721 2039 ntAPPRIS P2 TSL 1 (best) BASIC31.75■■■□□ 2.67
CDK11AQ9UQ88 TMSB4X-201ENST00000380633 495 ntAPPRIS P1 TSL 3 BASIC31.75■■■□□ 2.67
CDK11AQ9UQ88 AC108025.1-201ENST00000453678 1058 ntTSL 5 BASIC31.75■■■□□ 2.67
CDK11AQ9UQ88 BORCS8-MEF2B-202ENST00000444486 1492 ntAPPRIS P2 TSL 2 BASIC31.75■■■□□ 2.67
CDK11AQ9UQ88 SETD6-201ENST00000219315 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC31.75■■■□□ 2.67
CDK11AQ9UQ88 ARHGDIA-202ENST00000400721 1568 ntTSL 2 BASIC31.75■■■□□ 2.67
CDK11AQ9UQ88 NEURL3-202ENST00000435380 1675 ntTSL 1 (best) BASIC31.75■■■□□ 2.67
CDK11AQ9UQ88 DUSP9-201ENST00000342782 2433 ntAPPRIS P1 TSL 1 (best) BASIC31.75■■■□□ 2.67
CDK11AQ9UQ88 ARL13B-205ENST00000471138 2206 ntAPPRIS P1 TSL 1 (best) BASIC31.75■■■□□ 2.67
CDK11AQ9UQ88 ZDHHC16-202ENST00000352634 1718 ntAPPRIS ALT1 TSL 1 (best) BASIC31.75■■■□□ 2.67
CDK11AQ9UQ88 ANAPC1P1-202ENST00000616781 1771 ntTSL 1 (best) BASIC31.74■■■□□ 2.67
CDK11AQ9UQ88 FSCN2-202ENST00000417245 1665 ntAPPRIS P1 TSL 1 (best) BASIC31.74■■■□□ 2.67
CDK11AQ9UQ88 PRSS33-202ENST00000570702 1676 ntAPPRIS P1 TSL 1 (best) BASIC31.74■■■□□ 2.67
CDK11AQ9UQ88 RFXAP-201ENST00000255476 2304 ntAPPRIS P1 TSL 1 (best) BASIC31.74■■■□□ 2.67
Retrieved 100 of 98,524 protein–RNA pairs in 25.6 ms