Protein–RNA interactions for Protein: Q9UK58

CCNL1, Cyclin-L1, humanhuman

Predicted RBP Predictions only

Length 526 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNL1Q9UK58 GAMT-201ENST00000252288 1121 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
CCNL1Q9UK58 MZB1-201ENST00000302125 825 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
CCNL1Q9UK58 AC068831.2-201ENST00000448987 367 ntTSL 2 BASIC26.3■■□□□ 1.8
CCNL1Q9UK58 PACRGL-207ENST00000502938 810 ntTSL 4 BASIC26.3■■□□□ 1.8
CCNL1Q9UK58 ZNF688-205ENST00000563707 244 ntTSL 3 BASIC26.3■■□□□ 1.8
CCNL1Q9UK58 DEDD2-209ENST00000598727 1037 ntTSL 1 (best) BASIC26.3■■□□□ 1.8
CCNL1Q9UK58 SMAGP-204ENST00000603838 816 ntTSL 2 BASIC26.3■■□□□ 1.8
CCNL1Q9UK58 AC018445.1-201ENST00000621571 568 ntTSL 4 BASIC26.3■■□□□ 1.8
CCNL1Q9UK58 HTR7P1-201ENST00000538670 1336 ntBASIC26.3■■□□□ 1.8
CCNL1Q9UK58 SLC25A22-216ENST00000531214 1790 ntAPPRIS P1 TSL 2 BASIC26.3■■□□□ 1.8
CCNL1Q9UK58 DAZAP1-201ENST00000233078 2160 ntAPPRIS P2 TSL 1 (best) BASIC26.3■■□□□ 1.8
CCNL1Q9UK58 ANKRD65-204ENST00000520296 1632 ntTSL 1 (best) BASIC26.29■■□□□ 1.8
CCNL1Q9UK58 KCNK17-201ENST00000373231 1658 ntAPPRIS P3 TSL 1 (best) BASIC26.29■■□□□ 1.8
CCNL1Q9UK58 NEURL3-202ENST00000435380 1675 ntTSL 1 (best) BASIC26.29■■□□□ 1.8
CCNL1Q9UK58 RRNAD1-201ENST00000368216 2254 ntAPPRIS P3 TSL 1 (best) BASIC26.29■■□□□ 1.8
CCNL1Q9UK58 SNAPIN-201ENST00000368685 1030 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
CCNL1Q9UK58 KCNIP3-205ENST00000468529 985 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
CCNL1Q9UK58 AC145285.6-201ENST00000604632 637 ntBASIC26.29■■□□□ 1.8
CCNL1Q9UK58 LSM14B-201ENST00000279068 2548 ntAPPRIS P1 TSL 5 BASIC26.29■■□□□ 1.8
CCNL1Q9UK58 FAM99A-202ENST00000538190 1989 ntBASIC26.29■■□□□ 1.8
CCNL1Q9UK58 GALNT12-201ENST00000375011 2735 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
CCNL1Q9UK58 UBE2C-201ENST00000243893 476 ntTSL 2 BASIC26.28■■□□□ 1.8
CCNL1Q9UK58 AP001059.1-201ENST00000442785 523 ntTSL 3 BASIC26.28■■□□□ 1.8
CCNL1Q9UK58 ANAPC11-207ENST00000572639 578 ntAPPRIS P1 TSL 3 BASIC26.28■■□□□ 1.8
CCNL1Q9UK58 SLC39A11-207ENST00000579732 1004 ntTSL 2 BASIC26.28■■□□□ 1.8
CCNL1Q9UK58 AL356652.1-201ENST00000615962 565 ntBASIC26.28■■□□□ 1.8
CCNL1Q9UK58 HSD17B12-213ENST00000637401 866 ntTSL 4 BASIC26.28■■□□□ 1.8
CCNL1Q9UK58 CLDND1-201ENST00000341181 2161 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
CCNL1Q9UK58 KLC1-201ENST00000246489 2294 ntAPPRIS P1 TSL 5 BASIC26.28■■□□□ 1.8
CCNL1Q9UK58 KLC1-224ENST00000557450 2265 ntTSL 5 BASIC26.28■■□□□ 1.8
CCNL1Q9UK58 TSSC4-207ENST00000451491 1423 ntAPPRIS P3 TSL 1 (best) BASIC26.28■■□□□ 1.8
CCNL1Q9UK58 DDX42-201ENST00000359353 2783 ntTSL 5 BASIC26.28■■□□□ 1.8
CCNL1Q9UK58 ST7L-201ENST00000343210 1866 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
CCNL1Q9UK58 FAM197Y1-201ENST00000421178 764 ntBASIC26.27■■□□□ 1.8
CCNL1Q9UK58 AC126696.3-202ENST00000570159 553 ntTSL 5 BASIC26.27■■□□□ 1.8
CCNL1Q9UK58 P4HB-223ENST00000576390 439 ntTSL 4 BASIC26.27■■□□□ 1.8
CCNL1Q9UK58 AC005363.2-201ENST00000618631 242 ntBASIC26.27■■□□□ 1.8
CCNL1Q9UK58 Six3os1_6.1-201ENST00000620790 196 ntBASIC26.27■■□□□ 1.8
CCNL1Q9UK58 CDX1-202ENST00000616154 1343 ntTSL 1 (best) BASIC26.27■■□□□ 1.8
CCNL1Q9UK58 HSD11B1L-219ENST00000581893 1540 ntTSL 1 (best) BASIC26.27■■□□□ 1.8
CCNL1Q9UK58 CPLX1-203ENST00000505203 2011 ntTSL 2 BASIC26.27■■□□□ 1.8
CCNL1Q9UK58 CYS1-201ENST00000381813 2738 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
CCNL1Q9UK58 GAL3ST3-201ENST00000312006 2133 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
CCNL1Q9UK58 CDC14A-203ENST00000370124 1883 ntTSL 1 (best) BASIC26.26■■□□□ 1.79
CCNL1Q9UK58 SPAST-204ENST00000621856 1715 ntTSL 1 (best) BASIC26.26■■□□□ 1.79
CCNL1Q9UK58 TM7SF2-202ENST00000345348 1490 ntTSL 1 (best) BASIC26.26■■□□□ 1.79
CCNL1Q9UK58 GNB2-206ENST00000424361 1478 ntTSL 5 BASIC26.26■■□□□ 1.79
CCNL1Q9UK58 EPS8L1-209ENST00000588359 1407 ntTSL 5 BASIC26.26■■□□□ 1.79
CCNL1Q9UK58 LINC01184-202ENST00000501173 949 ntTSL 5 BASIC26.26■■□□□ 1.79
CCNL1Q9UK58 ATP6V0C-203ENST00000565223 668 ntTSL 3 BASIC26.26■■□□□ 1.79
CCNL1Q9UK58 ATP6V0C-204ENST00000568562 477 ntTSL 3 BASIC26.26■■□□□ 1.79
CCNL1Q9UK58 RDX-204ENST00000528498 2511 ntTSL 1 (best) BASIC26.26■■□□□ 1.79
CCNL1Q9UK58 UNC50-204ENST00000409975 2172 ntTSL 1 (best) BASIC26.25■■□□□ 1.79
CCNL1Q9UK58 SLC39A14-202ENST00000289952 2137 ntAPPRIS ALT2 TSL 2 BASIC26.25■■□□□ 1.79
CCNL1Q9UK58 CLDND2-201ENST00000291715 974 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
CCNL1Q9UK58 COPS9-201ENST00000307266 759 ntTSL 1 (best) BASIC26.25■■□□□ 1.79
CCNL1Q9UK58 FKBP2-202ENST00000394540 1002 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
CCNL1Q9UK58 ABCC5-211ENST00000446941 883 ntTSL 1 (best) BASIC26.25■■□□□ 1.79
CCNL1Q9UK58 TPM1-226ENST00000560959 925 ntTSL 2 BASIC26.25■■□□□ 1.79
CCNL1Q9UK58 RMI2-205ENST00000576027 818 ntTSL 2 BASIC26.25■■□□□ 1.79
CCNL1Q9UK58 MTCH2-201ENST00000302503 2587 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
CCNL1Q9UK58 IVD-206ENST00000487418 1809 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
CCNL1Q9UK58 RHBDD3-201ENST00000216085 1794 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
CCNL1Q9UK58 EIPR1-206ENST00000443925 1771 ntTSL 3 BASIC26.25■■□□□ 1.79
CCNL1Q9UK58 RALGPS1-207ENST00000394022 1672 ntTSL 2 BASIC26.25■■□□□ 1.79
CCNL1Q9UK58 MON1A-203ENST00000455683 1617 ntAPPRIS ALT2 TSL 1 (best) BASIC26.25■■□□□ 1.79
CCNL1Q9UK58 PLPP5-209ENST00000529359 2185 ntTSL 1 (best) BASIC26.24■■□□□ 1.79
CCNL1Q9UK58 ZBTB45-205ENST00000600990 2159 ntAPPRIS P1 TSL 5 BASIC26.24■■□□□ 1.79
CCNL1Q9UK58 DLL3-202ENST00000356433 2055 ntAPPRIS P1 TSL 2 BASIC26.24■■□□□ 1.79
CCNL1Q9UK58 BTBD1-202ENST00000379403 1467 ntTSL 5 BASIC26.24■■□□□ 1.79
CCNL1Q9UK58 RHOC-204ENST00000369633 1295 ntAPPRIS P1 TSL 3 BASIC26.24■■□□□ 1.79
CCNL1Q9UK58 GDAP1L1-202ENST00000372952 722 ntTSL 5 BASIC26.24■■□□□ 1.79
CCNL1Q9UK58 AC005521.1-201ENST00000393351 872 ntBASIC26.24■■□□□ 1.79
CCNL1Q9UK58 AC020911.2-202ENST00000588945 593 ntTSL 3 BASIC26.24■■□□□ 1.79
CCNL1Q9UK58 SNHG7-201ENST00000414282 2357 ntTSL 2 BASIC26.24■■□□□ 1.79
CCNL1Q9UK58 AMZ1-202ENST00000407112 1862 ntTSL 2 BASIC26.23■■□□□ 1.79
CCNL1Q9UK58 CLEC14A-201ENST00000342213 2267 ntAPPRIS P1 BASIC26.23■■□□□ 1.79
CCNL1Q9UK58 KRT8P9-201ENST00000558927 1449 ntBASIC26.23■■□□□ 1.79
CCNL1Q9UK58 ASPSCR1-201ENST00000306729 2123 ntAPPRIS ALT2 TSL 2 BASIC26.23■■□□□ 1.79
CCNL1Q9UK58 GPSM1-204ENST00000429455 2057 ntTSL 3 BASIC26.23■■□□□ 1.79
CCNL1Q9UK58 RBBP7-202ENST00000380084 2036 ntTSL 2 BASIC26.23■■□□□ 1.79
CCNL1Q9UK58 IFI6-202ENST00000361157 841 ntAPPRIS ALT2 TSL 1 (best) BASIC26.23■■□□□ 1.79
CCNL1Q9UK58 CTNNBIP1-204ENST00000400904 1206 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
CCNL1Q9UK58 KRT16P5-201ENST00000455284 522 ntBASIC26.23■■□□□ 1.79
CCNL1Q9UK58 SLC52A2-205ENST00000526752 710 ntTSL 3 BASIC26.23■■□□□ 1.79
CCNL1Q9UK58 MRPL4-204ENST00000588502 827 ntTSL 2 BASIC26.23■■□□□ 1.79
CCNL1Q9UK58 SETD6-201ENST00000219315 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC26.23■■□□□ 1.79
CCNL1Q9UK58 CCDC106-207ENST00000591578 1592 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
CCNL1Q9UK58 ATP6V0B-213ENST00000532642 1685 ntTSL 2 BASIC26.22■■□□□ 1.79
CCNL1Q9UK58 WDR37-203ENST00000381329 1307 ntTSL 1 (best) BASIC26.22■■□□□ 1.79
CCNL1Q9UK58 SRI-203ENST00000419179 1307 ntTSL 2 BASIC26.22■■□□□ 1.79
CCNL1Q9UK58 ZGPAT-204ENST00000369967 1890 ntAPPRIS P1 TSL 5 BASIC26.22■■□□□ 1.79
CCNL1Q9UK58 MRPS24-201ENST00000317534 707 ntAPPRIS P1 TSL 1 (best) BASIC26.22■■□□□ 1.79
CCNL1Q9UK58 AL353807.1-201ENST00000427475 662 ntBASIC26.22■■□□□ 1.79
CCNL1Q9UK58 HES2-206ENST00000489730 730 ntTSL 2 BASIC26.22■■□□□ 1.79
CCNL1Q9UK58 EGFEM1P-209ENST00000502332 728 ntTSL 3 BASIC26.22■■□□□ 1.79
CCNL1Q9UK58 ARF3-208ENST00000541959 807 ntAPPRIS P1 TSL 5 BASIC26.22■■□□□ 1.79
CCNL1Q9UK58 DECR2-212ENST00000627716 352 ntTSL 2 BASIC26.22■■□□□ 1.79
CCNL1Q9UK58 THOC6-209ENST00000575576 1360 ntTSL 5 BASIC26.21■■□□□ 1.79
CCNL1Q9UK58 MFSD14C-208ENST00000637864 1802 ntAPPRIS ALT2 TSL 2 BASIC26.21■■□□□ 1.79
Retrieved 100 of 98,524 protein–RNA pairs in 16.2 ms