Protein–RNA interactions for Protein: Q9UHC1

MLH3, DNA mismatch repair protein Mlh3, humanhuman

Predictions only

Length 1,453 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MLH3Q9UHC1 KRT19-201ENST00000361566 1390 ntAPPRIS P1 TSL 1 (best) BASIC30.75■■■□□ 2.51
MLH3Q9UHC1 AL133410.2-201ENST00000425499 696 ntTSL 5 BASIC30.75■■■□□ 2.51
MLH3Q9UHC1 AC026427.1-201ENST00000508993 555 ntTSL 3 BASIC30.75■■■□□ 2.51
MLH3Q9UHC1 FGF17-202ENST00000518533 1706 ntTSL 1 (best) BASIC30.74■■■□□ 2.51
MLH3Q9UHC1 PLPP5-209ENST00000529359 2185 ntTSL 1 (best) BASIC30.74■■■□□ 2.51
MLH3Q9UHC1 AL035541.1-201ENST00000424850 823 ntTSL 2 BASIC30.74■■■□□ 2.51
MLH3Q9UHC1 BABAM1-202ENST00000447614 930 ntAPPRIS ALT2 TSL 5 BASIC30.74■■■□□ 2.51
MLH3Q9UHC1 AC140479.4-201ENST00000561715 463 ntTSL 4 BASIC30.74■■■□□ 2.51
MLH3Q9UHC1 KRT8P9-201ENST00000558927 1449 ntBASIC30.74■■■□□ 2.51
MLH3Q9UHC1 EPS8L1-209ENST00000588359 1407 ntTSL 5 BASIC30.74■■■□□ 2.51
MLH3Q9UHC1 RALGPS1-207ENST00000394022 1672 ntTSL 2 BASIC30.73■■■□□ 2.51
MLH3Q9UHC1 SNX7-205ENST00000529992 1589 ntTSL 2 BASIC30.73■■■□□ 2.51
MLH3Q9UHC1 CYHR1-202ENST00000403000 1477 ntTSL 1 (best) BASIC30.73■■■□□ 2.51
MLH3Q9UHC1 CCNG2-204ENST00000502280 1459 ntAPPRIS P1 TSL 2 BASIC30.73■■■□□ 2.51
MLH3Q9UHC1 VEGFB-201ENST00000309422 1380 ntAPPRIS P3 TSL 1 (best) BASIC30.73■■■□□ 2.51
MLH3Q9UHC1 RBM17P1-201ENST00000453646 1190 ntBASIC30.73■■■□□ 2.51
MLH3Q9UHC1 KCNIP3-205ENST00000468529 985 ntAPPRIS P1 TSL 1 (best) BASIC30.73■■■□□ 2.51
MLH3Q9UHC1 POLDIP2-202ENST00000618887 1524 ntTSL 2 BASIC30.73■■■□□ 2.51
MLH3Q9UHC1 MCUB-201ENST00000394650 2278 ntAPPRIS P1 TSL 1 (best) BASIC30.73■■■□□ 2.51
MLH3Q9UHC1 ARL6IP4-220ENST00000543566 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC30.73■■■□□ 2.51
MLH3Q9UHC1 HTR7P1-201ENST00000538670 1336 ntBASIC30.73■■■□□ 2.51
MLH3Q9UHC1 ZDHHC16-202ENST00000352634 1718 ntAPPRIS ALT1 TSL 1 (best) BASIC30.73■■■□□ 2.51
MLH3Q9UHC1 FKBP2-202ENST00000394540 1002 ntAPPRIS P1 TSL 1 (best) BASIC30.72■■■□□ 2.51
MLH3Q9UHC1 ABCC5-211ENST00000446941 883 ntTSL 1 (best) BASIC30.72■■■□□ 2.51
MLH3Q9UHC1 AC020911.2-202ENST00000588945 593 ntTSL 3 BASIC30.72■■■□□ 2.51
MLH3Q9UHC1 AC092384.1-201ENST00000378347 1812 ntTSL 2 BASIC30.72■■■□□ 2.51
MLH3Q9UHC1 DISC1-223ENST00000628350 2363 ntAPPRIS ALT2 TSL 1 (best) BASIC30.72■■■□□ 2.51
MLH3Q9UHC1 GOLGA2P10-204ENST00000618004 1349 ntTSL 1 (best) BASIC30.72■■■□□ 2.51
MLH3Q9UHC1 RBBP7-202ENST00000380084 2036 ntTSL 2 BASIC30.72■■■□□ 2.51
MLH3Q9UHC1 UNC50-204ENST00000409975 2172 ntTSL 1 (best) BASIC30.72■■■□□ 2.51
MLH3Q9UHC1 ACAA1-202ENST00000333167 1785 ntAPPRIS P1 TSL 1 (best) BASIC30.72■■■□□ 2.51
MLH3Q9UHC1 SCAMP3-201ENST00000302631 1446 ntAPPRIS P1 TSL 1 (best) BASIC30.71■■■□□ 2.51
MLH3Q9UHC1 AC113347.1-201ENST00000413321 391 ntBASIC30.71■■■□□ 2.51
MLH3Q9UHC1 AL355355.2-201ENST00000442321 338 ntBASIC30.71■■■□□ 2.51
MLH3Q9UHC1 NUDT16P1-203ENST00000513809 620 ntBASIC30.71■■■□□ 2.51
MLH3Q9UHC1 GOLGA2P7-203ENST00000557881 896 ntTSL 1 (best) BASIC30.71■■■□□ 2.51
MLH3Q9UHC1 AC068987.1-201ENST00000562996 427 ntTSL 3 BASIC30.71■■■□□ 2.51
MLH3Q9UHC1 AL049597.2-201ENST00000565575 961 ntBASIC30.71■■■□□ 2.51
MLH3Q9UHC1 GOLGA2P10-205ENST00000618267 983 ntTSL 1 (best) BASIC30.71■■■□□ 2.51
MLH3Q9UHC1 WDR37-203ENST00000381329 1307 ntTSL 1 (best) BASIC30.71■■■□□ 2.51
MLH3Q9UHC1 THOC6-209ENST00000575576 1360 ntTSL 5 BASIC30.71■■■□□ 2.51
MLH3Q9UHC1 PCK2-201ENST00000216780 2357 ntAPPRIS P1 TSL 1 (best) BASIC30.71■■■□□ 2.51
MLH3Q9UHC1 NDEL1-201ENST00000334527 2372 ntAPPRIS P1 TSL 1 (best) BASIC30.71■■■□□ 2.51
MLH3Q9UHC1 NR2F2-204ENST00000453270 1712 ntTSL 1 (best) BASIC30.71■■■□□ 2.51
MLH3Q9UHC1 SPAST-204ENST00000621856 1715 ntTSL 1 (best) BASIC30.71■■■□□ 2.51
MLH3Q9UHC1 SMIM20-201ENST00000506197 935 ntAPPRIS P1 TSL 1 (best) BASIC30.7■■■□□ 2.51
MLH3Q9UHC1 TPM1-226ENST00000560959 925 ntTSL 2 BASIC30.7■■■□□ 2.51
MLH3Q9UHC1 ATP6V0C-203ENST00000565223 668 ntTSL 3 BASIC30.7■■■□□ 2.51
MLH3Q9UHC1 ATP6V0C-204ENST00000568562 477 ntTSL 3 BASIC30.7■■■□□ 2.51
MLH3Q9UHC1 AL590326.2-201ENST00000625139 305 ntBASIC30.7■■■□□ 2.51
MLH3Q9UHC1 ADRM1-201ENST00000253003 1478 ntAPPRIS P1 TSL 1 (best) BASIC30.7■■■□□ 2.51
MLH3Q9UHC1 NFKBIE-201ENST00000275015 2581 ntTSL 1 (best) BASIC30.7■■■□□ 2.51
MLH3Q9UHC1 ZBTB45-205ENST00000600990 2159 ntAPPRIS P1 TSL 5 BASIC30.7■■■□□ 2.5
MLH3Q9UHC1 ANKRD65-204ENST00000520296 1632 ntTSL 1 (best) BASIC30.7■■■□□ 2.5
MLH3Q9UHC1 SLC52A2-205ENST00000526752 710 ntTSL 3 BASIC30.7■■■□□ 2.5
MLH3Q9UHC1 ARF3-208ENST00000541959 807 ntAPPRIS P1 TSL 5 BASIC30.7■■■□□ 2.5
MLH3Q9UHC1 AC003005.1-201ENST00000601674 582 ntAPPRIS P5 TSL 2 BASIC30.7■■■□□ 2.5
MLH3Q9UHC1 RPL23AP53-202ENST00000606507 370 ntTSL 3 BASIC30.7■■■□□ 2.5
MLH3Q9UHC1 DEDD2-201ENST00000336034 1882 ntAPPRIS ALT1 TSL 1 (best) BASIC30.69■■■□□ 2.5
MLH3Q9UHC1 OXER1-201ENST00000378661 1781 ntAPPRIS P1 BASIC30.69■■■□□ 2.5
MLH3Q9UHC1 RFXANK-201ENST00000303088 1407 ntAPPRIS P1 TSL 1 (best) BASIC30.69■■■□□ 2.5
MLH3Q9UHC1 DLL3-201ENST00000205143 2332 ntTSL 1 (best) BASIC30.69■■■□□ 2.5
MLH3Q9UHC1 ASPSCR1-201ENST00000306729 2123 ntAPPRIS ALT2 TSL 2 BASIC30.69■■■□□ 2.5
MLH3Q9UHC1 AC079598.2-202ENST00000546624 1451 ntBASIC30.69■■■□□ 2.5
MLH3Q9UHC1 TNFRSF14-201ENST00000355716 1707 ntAPPRIS P2 TSL 1 (best) BASIC30.69■■■□□ 2.5
MLH3Q9UHC1 ZNF410-206ENST00000540593 1722 ntTSL 2 BASIC30.69■■■□□ 2.5
MLH3Q9UHC1 FDX2-207ENST00000494368 584 ntTSL 4 BASIC30.69■■■□□ 2.5
MLH3Q9UHC1 AC016737.2-201ENST00000609273 358 ntTSL 3 BASIC30.69■■■□□ 2.5
MLH3Q9UHC1 ZGPAT-204ENST00000369967 1890 ntAPPRIS P1 TSL 5 BASIC30.68■■■□□ 2.5
MLH3Q9UHC1 AMZ1-202ENST00000407112 1862 ntTSL 2 BASIC30.68■■■□□ 2.5
MLH3Q9UHC1 RRNAD1-201ENST00000368216 2254 ntAPPRIS P3 TSL 1 (best) BASIC30.68■■■□□ 2.5
MLH3Q9UHC1 TSSK6-201ENST00000585580 1467 ntAPPRIS P1 BASIC30.68■■■□□ 2.5
MLH3Q9UHC1 GPSM1-204ENST00000429455 2057 ntTSL 3 BASIC30.68■■■□□ 2.5
MLH3Q9UHC1 RPP25L-201ENST00000297613 1092 ntAPPRIS P1 TSL 2 BASIC30.68■■■□□ 2.5
MLH3Q9UHC1 MRGPRG-201ENST00000332314 870 ntAPPRIS P1 BASIC30.68■■■□□ 2.5
MLH3Q9UHC1 IFI6-201ENST00000339145 822 ntAPPRIS P4 TSL 2 BASIC30.68■■■□□ 2.5
MLH3Q9UHC1 RBM42-202ENST00000586618 771 ntTSL 3 BASIC30.68■■■□□ 2.5
MLH3Q9UHC1 CD55-203ENST00000367063 1691 ntAPPRIS ALT2 TSL 1 (best) BASIC30.68■■■□□ 2.5
MLH3Q9UHC1 SCRN2-212ENST00000584123 1745 ntTSL 1 (best) BASIC30.67■■■□□ 2.5
MLH3Q9UHC1 NELFB-201ENST00000343053 2698 ntAPPRIS ALT2 TSL 1 (best) BASIC30.67■■■□□ 2.5
MLH3Q9UHC1 NFKBIL1-201ENST00000376145 1401 ntTSL 1 (best) BASIC30.67■■■□□ 2.5
MLH3Q9UHC1 DAZAP1-201ENST00000233078 2160 ntAPPRIS P2 TSL 1 (best) BASIC30.67■■■□□ 2.5
MLH3Q9UHC1 FAH-202ENST00000407106 2152 ntAPPRIS P1 TSL 5 BASIC30.67■■■□□ 2.5
MLH3Q9UHC1 VRK2-201ENST00000340157 1888 ntAPPRIS P3 TSL 1 (best) BASIC30.67■■■□□ 2.5
MLH3Q9UHC1 YBEY-205ENST00000397694 534 ntTSL 1 (best) BASIC30.67■■■□□ 2.5
MLH3Q9UHC1 AC004882.1-201ENST00000416352 590 ntTSL 3 BASIC30.67■■■□□ 2.5
MLH3Q9UHC1 FAM197Y1-201ENST00000421178 764 ntBASIC30.67■■■□□ 2.5
MLH3Q9UHC1 LINC00894-209ENST00000458274 547 ntTSL 2 BASIC30.67■■■□□ 2.5
MLH3Q9UHC1 PACRGL-207ENST00000502938 810 ntTSL 4 BASIC30.67■■■□□ 2.5
MLH3Q9UHC1 NME3-204ENST00000563498 920 ntTSL 2 BASIC30.67■■■□□ 2.5
MLH3Q9UHC1 GLDC-219ENST00000640208 420 ntTSL 2 BASIC30.67■■■□□ 2.5
MLH3Q9UHC1 EML2-209ENST00000587152 2763 ntAPPRIS ALT2 TSL 2 BASIC30.66■■■□□ 2.5
MLH3Q9UHC1 CDC42SE2-206ENST00000503291 2025 ntTSL 1 (best) BASIC30.66■■■□□ 2.5
MLH3Q9UHC1 ARMC10P1-201ENST00000313754 855 ntBASIC30.66■■■□□ 2.5
MLH3Q9UHC1 CTNNBIP1-204ENST00000400904 1206 ntAPPRIS P1 TSL 1 (best) BASIC30.66■■■□□ 2.5
MLH3Q9UHC1 REXO1L10P-201ENST00000615707 1290 ntBASIC30.66■■■□□ 2.5
MLH3Q9UHC1 DECR2-212ENST00000627716 352 ntTSL 2 BASIC30.66■■■□□ 2.5
MLH3Q9UHC1 NAAA-206ENST00000507956 1300 ntAPPRIS ALT2 TSL 2 BASIC30.66■■■□□ 2.5
MLH3Q9UHC1 CPLX1-203ENST00000505203 2011 ntTSL 2 BASIC30.66■■■□□ 2.5
MLH3Q9UHC1 SNAPIN-201ENST00000368685 1030 ntAPPRIS P1 TSL 1 (best) BASIC30.65■■■□□ 2.5
Retrieved 100 of 98,524 protein–RNA pairs in 36.2 ms