Protein–RNA interactions for Protein: Q9UBX1

CTSF, Cathepsin F, humanhuman

Predictions only

Length 484 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTSFQ9UBX1 TMEM9-209ENST00000485839 938 ntAPPRIS P3 TSL 2 BASIC19.29■□□□□ 0.68
CTSFQ9UBX1 IGFBP6-203ENST00000548547 1177 ntAPPRIS ALT2 TSL 5 BASIC19.29■□□□□ 0.68
CTSFQ9UBX1 TMEM191A-211ENST00000637163 1067 ntBASIC19.29■□□□□ 0.68
CTSFQ9UBX1 GCH1-205ENST00000536224 1805 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
CTSFQ9UBX1 NAE1-203ENST00000379463 1909 ntTSL 2 BASIC19.29■□□□□ 0.68
CTSFQ9UBX1 FADS6-204ENST00000614223 2044 ntAPPRIS ALT2 TSL 5 BASIC19.29■□□□□ 0.68
CTSFQ9UBX1 ILDR2-206ENST00000528703 2446 ntAPPRIS ALT2 TSL 5 BASIC19.29■□□□□ 0.68
CTSFQ9UBX1 CIDEB-201ENST00000258807 2294 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CTSFQ9UBX1 TOLLIP-201ENST00000263646 2283 ntTSL 5 BASIC19.28■□□□□ 0.68
CTSFQ9UBX1 PRAF2-202ENST00000553851 1334 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CTSFQ9UBX1 FOXK2-201ENST00000335255 5265 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CTSFQ9UBX1 SLC9A3R1-201ENST00000262613 1969 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CTSFQ9UBX1 AC011484.1-201ENST00000377652 1995 ntBASIC19.28■□□□□ 0.68
CTSFQ9UBX1 ZNF584-201ENST00000306910 2332 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CTSFQ9UBX1 HNRNPLL-204ENST00000409328 1908 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
CTSFQ9UBX1 SLC18A3-201ENST00000374115 2420 ntAPPRIS P1 BASIC19.28■□□□□ 0.68
CTSFQ9UBX1 CKLF-201ENST00000264001 669 ntAPPRIS P4 TSL 1 (best) BASIC19.28■□□□□ 0.68
CTSFQ9UBX1 FITM1-201ENST00000267426 1194 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CTSFQ9UBX1 HCFC1R1-202ENST00000354679 765 ntTSL 2 BASIC19.28■□□□□ 0.68
CTSFQ9UBX1 CNIH4-203ENST00000366858 702 ntTSL 3 BASIC19.28■□□□□ 0.68
CTSFQ9UBX1 CYYR1-202ENST00000400043 735 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
CTSFQ9UBX1 EP300-AS1-201ENST00000420537 457 ntTSL 3 BASIC19.28■□□□□ 0.68
CTSFQ9UBX1 C14orf28-204ENST00000557112 1097 ntTSL 5 BASIC19.28■□□□□ 0.68
CTSFQ9UBX1 AC007993.2-201ENST00000592842 521 ntTSL 4 BASIC19.28■□□□□ 0.68
CTSFQ9UBX1 FBXO6-201ENST00000376753 1520 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CTSFQ9UBX1 AL049796.1-201ENST00000565336 1766 ntBASIC19.28■□□□□ 0.68
CTSFQ9UBX1 P2RX4-202ENST00000337233 2032 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CTSFQ9UBX1 PYURF-201ENST00000273968 1361 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CTSFQ9UBX1 TSTA3-201ENST00000425753 1362 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CTSFQ9UBX1 AL121603.2-201ENST00000557373 2117 ntBASIC19.28■□□□□ 0.68
CTSFQ9UBX1 PKIB-206ENST00000392490 1811 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CTSFQ9UBX1 CERS1-202ENST00000542296 1947 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
CTSFQ9UBX1 ELL3-201ENST00000319359 2352 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
CTSFQ9UBX1 SLC38A7-205ENST00000564010 1437 ntTSL 2 BASIC19.27■□□□□ 0.68
CTSFQ9UBX1 APLP2-204ENST00000345598 1862 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
CTSFQ9UBX1 PKMYT1-213ENST00000574385 1892 ntAPPRIS P1 TSL 2 BASIC19.27■□□□□ 0.68
CTSFQ9UBX1 SMIM11B-205ENST00000624304 1863 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
CTSFQ9UBX1 FEM1AP4-201ENST00000443167 1987 ntBASIC19.27■□□□□ 0.68
CTSFQ9UBX1 GAS7-202ENST00000396115 929 ntTSL 5 BASIC19.27■□□□□ 0.68
CTSFQ9UBX1 AC114730.1-201ENST00000400768 472 ntTSL 4 BASIC19.27■□□□□ 0.68
CTSFQ9UBX1 LINC02531-201ENST00000404689 593 ntTSL 5 BASIC19.27■□□□□ 0.68
CTSFQ9UBX1 NCBP2-207ENST00000452404 1133 ntTSL 2 BASIC19.27■□□□□ 0.68
CTSFQ9UBX1 NREP-209ENST00000455559 698 ntAPPRIS P1 TSL 4 BASIC19.27■□□□□ 0.68
CTSFQ9UBX1 ABCC3-217ENST00000515707 656 ntTSL 3 BASIC19.27■□□□□ 0.68
CTSFQ9UBX1 LINC01578-208ENST00000557147 490 ntTSL 3 BASIC19.27■□□□□ 0.68
CTSFQ9UBX1 CLN6-207ENST00000566347 981 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
CTSFQ9UBX1 RFT1-202ENST00000394738 1800 ntTSL 5 BASIC19.27■□□□□ 0.68
CTSFQ9UBX1 PGPEP1L-202ENST00000535714 1483 ntTSL 2 BASIC19.27■□□□□ 0.67
CTSFQ9UBX1 ZNF511-201ENST00000359035 2004 ntTSL 2 BASIC19.27■□□□□ 0.67
CTSFQ9UBX1 ARHGEF25-201ENST00000286494 2552 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
CTSFQ9UBX1 AF106564.1-201ENST00000607058 2553 ntBASIC19.27■□□□□ 0.67
CTSFQ9UBX1 UNC93B1-201ENST00000227471 2316 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CTSFQ9UBX1 MARC2-201ENST00000359316 1335 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
CTSFQ9UBX1 CHKB-201ENST00000406938 1638 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CTSFQ9UBX1 JUNB-201ENST00000302754 1820 ntAPPRIS P1 BASIC19.26■□□□□ 0.67
CTSFQ9UBX1 THAP7-201ENST00000215742 1213 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CTSFQ9UBX1 IFI27L2-201ENST00000238609 511 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CTSFQ9UBX1 ATRAID-208ENST00000611786 1256 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
CTSFQ9UBX1 PTCD3-220ENST00000627371 210 ntTSL 5 BASIC19.26■□□□□ 0.67
CTSFQ9UBX1 OR10C1-203ENST00000444197 1672 ntAPPRIS P1 BASIC19.26■□□□□ 0.67
CTSFQ9UBX1 KCNQ5-213ENST00000629977 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
CTSFQ9UBX1 RITA1-201ENST00000548278 2053 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CTSFQ9UBX1 AC091729.3-201ENST00000423008 1401 ntTSL 2 BASIC19.25■□□□□ 0.67
CTSFQ9UBX1 COPS7A-208ENST00000538410 1610 ntTSL 3 BASIC19.25■□□□□ 0.67
CTSFQ9UBX1 PAQR6-212ENST00000540423 1729 ntTSL 3 BASIC19.25■□□□□ 0.67
CTSFQ9UBX1 OSR2-203ENST00000457907 2126 ntTSL 2 BASIC19.25■□□□□ 0.67
CTSFQ9UBX1 CHADL-201ENST00000216241 2533 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CTSFQ9UBX1 SLC35F5-203ENST00000409342 2284 ntTSL 2 BASIC19.25■□□□□ 0.67
CTSFQ9UBX1 TREX2-202ENST00000334497 1982 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
CTSFQ9UBX1 KCNK4-201ENST00000394525 1673 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CTSFQ9UBX1 NFIX-205ENST00000585575 1485 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
CTSFQ9UBX1 DTD1-201ENST00000377452 1387 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CTSFQ9UBX1 FMR1-202ENST00000334557 1295 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
CTSFQ9UBX1 GTF2A2-203ENST00000396061 758 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
CTSFQ9UBX1 ESRRAP1-201ENST00000400596 1257 ntBASIC19.25■□□□□ 0.67
CTSFQ9UBX1 STPG4-207ENST00000445927 891 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
CTSFQ9UBX1 HES2-205ENST00000487437 968 ntTSL 3 BASIC19.25■□□□□ 0.67
CTSFQ9UBX1 ZNF346-203ENST00000503425 1191 ntTSL 2 BASIC19.25■□□□□ 0.67
CTSFQ9UBX1 CDH18-AS1-201ENST00000513573 424 ntTSL 2 BASIC19.25■□□□□ 0.67
CTSFQ9UBX1 CFL1-211ENST00000531407 1062 ntTSL 2 BASIC19.25■□□□□ 0.67
CTSFQ9UBX1 PLEKHB1-216ENST00000543085 632 ntTSL 3 BASIC19.25■□□□□ 0.67
CTSFQ9UBX1 AC007114.1-201ENST00000576871 713 ntTSL 2 BASIC19.25■□□□□ 0.67
CTSFQ9UBX1 ADD3-AS1-204ENST00000627565 388 ntTSL 3 BASIC19.25■□□□□ 0.67
CTSFQ9UBX1 NRXN2-204ENST00000377559 6413 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
CTSFQ9UBX1 FBXO27-202ENST00000509137 2130 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
CTSFQ9UBX1 CD7-207ENST00000584284 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
CTSFQ9UBX1 DGKQ-201ENST00000273814 4636 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
CTSFQ9UBX1 PRR7-202ENST00000502922 1345 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
CTSFQ9UBX1 TSPAN3-207ENST00000559494 1326 ntTSL 5 BASIC19.25■□□□□ 0.67
CTSFQ9UBX1 DACT1-204ENST00000541264 2610 ntAPPRIS ALT2 TSL 2 BASIC19.24■□□□□ 0.67
CTSFQ9UBX1 OSR1-201ENST00000272223 1936 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CTSFQ9UBX1 SLC25A10-201ENST00000331531 1946 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
CTSFQ9UBX1 LOXL1-AS1-210ENST00000567257 2358 ntTSL 2 BASIC19.24■□□□□ 0.67
CTSFQ9UBX1 UBE2C-201ENST00000243893 476 ntTSL 2 BASIC19.24■□□□□ 0.67
CTSFQ9UBX1 GDF15-201ENST00000252809 1200 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CTSFQ9UBX1 MFF-205ENST00000354503 1085 ntTSL 2 BASIC19.24■□□□□ 0.67
CTSFQ9UBX1 DUSP23-201ENST00000368107 756 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CTSFQ9UBX1 DIMT1-202ENST00000506390 1208 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
CTSFQ9UBX1 FAM32A-205ENST00000589852 1168 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
CTSFQ9UBX1 ANKRD65-204ENST00000520296 1632 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 24.8 ms