Protein–RNA interactions for Protein: Q9UBF6

RNF7, RING-box protein 2, humanhuman

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF7Q9UBF6 TRAPPC3-208ENST00000616074 1114 ntTSL 5 BASIC17.26■□□□□ 0.35
RNF7Q9UBF6 RCN3-201ENST00000270645 1859 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
RNF7Q9UBF6 SGTA-201ENST00000221566 2330 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
RNF7Q9UBF6 IKBIP-203ENST00000393042 1368 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
RNF7Q9UBF6 TSSC4-203ENST00000380996 1544 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
RNF7Q9UBF6 DDAH1-205ENST00000539042 1519 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
RNF7Q9UBF6 GCH1-205ENST00000536224 1805 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
RNF7Q9UBF6 ST8SIA1-204ENST00000404299 1920 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
RNF7Q9UBF6 IGFLR1-201ENST00000246532 1645 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
RNF7Q9UBF6 NIPAL4-202ENST00000435489 1600 ntAPPRIS ALT2 TSL 2 BASIC17.25■□□□□ 0.35
RNF7Q9UBF6 AC008687.4-201ENST00000637680 1485 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
RNF7Q9UBF6 LMO4-202ENST00000370544 5405 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
RNF7Q9UBF6 LRCH4-209ENST00000497245 2014 ntTSL 5 BASIC17.25■□□□□ 0.35
RNF7Q9UBF6 RXFP3-201ENST00000330120 1852 ntAPPRIS P1 BASIC17.25■□□□□ 0.35
RNF7Q9UBF6 LTK-201ENST00000263800 3046 ntAPPRIS P4 TSL 1 (best) BASIC17.25■□□□□ 0.35
RNF7Q9UBF6 AC010980.2-201ENST00000587099 1412 ntBASIC17.25■□□□□ 0.35
RNF7Q9UBF6 GRTP1-201ENST00000326039 1294 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
RNF7Q9UBF6 PIGP-203ENST00000399098 972 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
RNF7Q9UBF6 METTL15-202ENST00000403099 795 ntTSL 5 BASIC17.25■□□□□ 0.35
RNF7Q9UBF6 AC093787.1-201ENST00000450396 207 ntBASIC17.25■□□□□ 0.35
RNF7Q9UBF6 PTGER2-202ENST00000557436 643 ntTSL 3 BASIC17.25■□□□□ 0.35
RNF7Q9UBF6 NDUFA6-AS1-207ENST00000595777 833 ntTSL 5 BASIC17.25■□□□□ 0.35
RNF7Q9UBF6 PTGER3-212ENST00000628037 1815 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
RNF7Q9UBF6 ZDHHC17-201ENST00000426126 5259 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
RNF7Q9UBF6 MKRN4P-201ENST00000444706 1521 ntBASIC17.25■□□□□ 0.35
RNF7Q9UBF6 SBK1-201ENST00000341901 4992 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
RNF7Q9UBF6 PLSCR3-213ENST00000576362 1605 ntTSL 3 BASIC17.25■□□□□ 0.35
RNF7Q9UBF6 KCNMB4-201ENST00000258111 4731 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
RNF7Q9UBF6 CYP21A1P-202ENST00000354927 1481 ntBASIC17.24■□□□□ 0.35
RNF7Q9UBF6 TMEM98-206ENST00000579849 4434 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
RNF7Q9UBF6 FAM151B-201ENST00000282226 1717 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
RNF7Q9UBF6 SYTL1-211ENST00000618673 1712 ntTSL 5 BASIC17.24■□□□□ 0.35
RNF7Q9UBF6 UBE2J2-201ENST00000347370 2387 ntTSL 3 BASIC17.24■□□□□ 0.35
RNF7Q9UBF6 TMC6-212ENST00000589553 2389 ntTSL 2 BASIC17.24■□□□□ 0.35
RNF7Q9UBF6 FOXN3-209ENST00000555353 1595 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
RNF7Q9UBF6 TNIP1-205ENST00000518977 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
RNF7Q9UBF6 UGP2-201ENST00000337130 2338 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
RNF7Q9UBF6 FNDC11-201ENST00000370097 1119 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
RNF7Q9UBF6 SLC29A4P1-201ENST00000398760 971 ntBASIC17.24■□□□□ 0.35
RNF7Q9UBF6 MAP2K4P1-201ENST00000438453 1195 ntBASIC17.24■□□□□ 0.35
RNF7Q9UBF6 ULK4P1-204ENST00000565949 721 ntTSL 4 BASIC17.24■□□□□ 0.35
RNF7Q9UBF6 AC091138.1-202ENST00000578967 457 ntTSL 2 BASIC17.24■□□□□ 0.35
RNF7Q9UBF6 LYSMD2-201ENST00000267838 1759 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
RNF7Q9UBF6 FAM3A-208ENST00000419205 1763 ntTSL 2 BASIC17.24■□□□□ 0.35
RNF7Q9UBF6 NFYC-204ENST00000372653 1862 ntTSL 2 BASIC17.24■□□□□ 0.35
RNF7Q9UBF6 CHKB-201ENST00000406938 1638 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
RNF7Q9UBF6 ZFP69B-202ENST00000411995 2109 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
RNF7Q9UBF6 PNKP-215ENST00000600910 1600 ntTSL 5 BASIC17.24■□□□□ 0.35
RNF7Q9UBF6 AL161756.1-202ENST00000359491 1717 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
RNF7Q9UBF6 FXYD3-203ENST00000435734 1467 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
RNF7Q9UBF6 CCDC88B-203ENST00000359902 2326 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
RNF7Q9UBF6 FGFR1-238ENST00000532791 5590 ntAPPRIS ALT1 TSL 5 BASIC17.23■□□□□ 0.35
RNF7Q9UBF6 MADCAM1-201ENST00000215637 1572 ntAPPRIS P4 TSL 1 (best) BASIC17.23■□□□□ 0.35
RNF7Q9UBF6 RAI14-201ENST00000265109 5092 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
RNF7Q9UBF6 BID-215ENST00000622694 2199 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
RNF7Q9UBF6 KLHDC9-201ENST00000368011 1314 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
RNF7Q9UBF6 UBE2E3-201ENST00000392415 1347 ntAPPRIS P1 TSL 3 BASIC17.23■□□□□ 0.35
RNF7Q9UBF6 TMEM176B-203ENST00000434545 1303 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
RNF7Q9UBF6 NDUFAF3-202ENST00000326925 2012 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
RNF7Q9UBF6 UNC119-202ENST00000335765 1424 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
RNF7Q9UBF6 EIF2B4-201ENST00000347454 1792 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
RNF7Q9UBF6 ITGB1BP1-202ENST00000355346 1963 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
RNF7Q9UBF6 GPR162-203ENST00000428545 1610 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
RNF7Q9UBF6 MFSD7-204ENST00000503156 1632 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
RNF7Q9UBF6 UBE2C-201ENST00000243893 476 ntTSL 2 BASIC17.23■□□□□ 0.35
RNF7Q9UBF6 IFI6-202ENST00000361157 841 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
RNF7Q9UBF6 CD99P1-203ENST00000431582 602 ntTSL 4 BASIC17.23■□□□□ 0.35
RNF7Q9UBF6 ZNRF2P2-202ENST00000442865 590 ntTSL 4 BASIC17.23■□□□□ 0.35
RNF7Q9UBF6 HTT-AS-201ENST00000503893 515 ntTSL 4 BASIC17.23■□□□□ 0.35
RNF7Q9UBF6 ZNF696-204ENST00000520333 605 ntTSL 5 BASIC17.23■□□□□ 0.35
RNF7Q9UBF6 ISCU-212ENST00000547005 795 ntTSL 3 BASIC17.23■□□□□ 0.35
RNF7Q9UBF6 LYRM1-205ENST00000562740 931 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
RNF7Q9UBF6 GNAO1-211ENST00000570235 568 ntTSL 2 BASIC17.23■□□□□ 0.35
RNF7Q9UBF6 LITAF-205ENST00000570904 1118 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
RNF7Q9UBF6 MIR2861-201ENST00000636310 90 ntBASIC17.23■□□□□ 0.35
RNF7Q9UBF6 DALRD3-202ENST00000341949 1739 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
RNF7Q9UBF6 RABL2B-206ENST00000395598 2169 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
RNF7Q9UBF6 CALY-201ENST00000252939 2271 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
RNF7Q9UBF6 EFHD1-201ENST00000264059 2259 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
RNF7Q9UBF6 SLC25A24P1-201ENST00000411846 1569 ntTSL 5 BASIC17.23■□□□□ 0.35
RNF7Q9UBF6 MAML1-201ENST00000292599 5723 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
RNF7Q9UBF6 HFE2-202ENST00000357836 2123 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
RNF7Q9UBF6 SMPDL3A-203ENST00000539041 1755 ntTSL 2 BASIC17.23■□□□□ 0.35
RNF7Q9UBF6 SMIM11B-205ENST00000624304 1863 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
RNF7Q9UBF6 AC087633.2-202ENST00000565166 1439 ntBASIC17.22■□□□□ 0.35
RNF7Q9UBF6 CDC123-201ENST00000281141 1542 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
RNF7Q9UBF6 DNAAF3-201ENST00000391720 2169 ntAPPRIS P3 TSL 2 BASIC17.22■□□□□ 0.35
RNF7Q9UBF6 SMTNL2-202ENST00000389313 2280 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
RNF7Q9UBF6 OTUB1-209ENST00000538426 1729 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
RNF7Q9UBF6 LAYN-202ENST00000375615 1836 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
RNF7Q9UBF6 PAQR6-213ENST00000612424 2037 ntTSL 2 BASIC17.22■□□□□ 0.35
RNF7Q9UBF6 GGTLC1-201ENST00000278765 974 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
RNF7Q9UBF6 TRPT1-201ENST00000317459 962 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
RNF7Q9UBF6 GCC2-AS1-201ENST00000322353 558 ntTSL 2 BASIC17.22■□□□□ 0.35
RNF7Q9UBF6 PHB2-213ENST00000546111 858 ntTSL 2 BASIC17.22■□□□□ 0.35
RNF7Q9UBF6 RPS15-206ENST00000589656 473 ntAPPRIS ALT1 TSL 5 BASIC17.22■□□□□ 0.35
RNF7Q9UBF6 CYP2T3P-201ENST00000601990 817 ntBASIC17.22■□□□□ 0.35
RNF7Q9UBF6 ALDH3A2-224ENST00000626500 995 ntTSL 5 BASIC17.22■□□□□ 0.35
RNF7Q9UBF6 PGPEP1L-202ENST00000535714 1483 ntTSL 2 BASIC17.22■□□□□ 0.35
RNF7Q9UBF6 EFS-203ENST00000429593 2610 ntTSL 2 BASIC17.22■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 51.6 ms