Protein–RNA interactions for Protein: Q9NUP7

TRMT13, tRNA:m(4)X modification enzyme TRM13 homolog, humanhuman

Known RBP Predictions only

Length 481 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRMT13Q9NUP7 AL353593.2-202ENST00000602947 550 ntTSL 4 BASIC22.59■■□□□ 1.21
TRMT13Q9NUP7 AMZ1-202ENST00000407112 1862 ntTSL 2 BASIC22.59■■□□□ 1.21
TRMT13Q9NUP7 RFXAP-201ENST00000255476 2304 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
TRMT13Q9NUP7 KCNC3-201ENST00000376959 5447 ntAPPRIS ALT2 TSL 5 BASIC22.59■■□□□ 1.21
TRMT13Q9NUP7 DPF1-209ENST00000456296 1562 ntAPPRIS P1 TSL 5 BASIC22.59■■□□□ 1.21
TRMT13Q9NUP7 SLC35B2-205ENST00000538577 1909 ntTSL 2 BASIC22.59■■□□□ 1.21
TRMT13Q9NUP7 SHISA4-201ENST00000362011 1341 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
TRMT13Q9NUP7 LRRC29-209ENST00000629962 1303 ntAPPRIS P1 TSL 5 BASIC22.58■■□□□ 1.21
TRMT13Q9NUP7 SLC52A2-211ENST00000532887 2147 ntAPPRIS P1 TSL 5 BASIC22.58■■□□□ 1.21
TRMT13Q9NUP7 C11orf95-202ENST00000433688 5716 ntAPPRIS P1 TSL 5 BASIC22.58■■□□□ 1.21
TRMT13Q9NUP7 RBPJL-202ENST00000372741 1636 ntTSL 1 (best) BASIC22.58■■□□□ 1.21
TRMT13Q9NUP7 UBE2C-201ENST00000243893 476 ntTSL 2 BASIC22.58■■□□□ 1.21
TRMT13Q9NUP7 TRAPPC3-204ENST00000373166 1265 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
TRMT13Q9NUP7 COL11A2-204ENST00000395194 1194 ntTSL 1 (best) BASIC22.58■■□□□ 1.21
TRMT13Q9NUP7 CXCL2-202ENST00000508487 1218 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
TRMT13Q9NUP7 B3GAT3-205ENST00000534026 1120 ntTSL 2 BASIC22.58■■□□□ 1.21
TRMT13Q9NUP7 MCRIP1-203ENST00000538396 925 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
TRMT13Q9NUP7 AL356652.1-201ENST00000615962 565 ntBASIC22.58■■□□□ 1.21
TRMT13Q9NUP7 AC113410.3-201ENST00000623366 203 ntBASIC22.58■■□□□ 1.21
TRMT13Q9NUP7 HIGD1A-201ENST00000321331 1373 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
TRMT13Q9NUP7 NCK2-201ENST00000233154 2683 ntAPPRIS P1 TSL 5 BASIC22.58■■□□□ 1.2
TRMT13Q9NUP7 C20orf27-201ENST00000217195 1302 ntTSL 2 BASIC22.57■■□□□ 1.2
TRMT13Q9NUP7 CHST7-201ENST00000276055 2289 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
TRMT13Q9NUP7 LHX2-201ENST00000373615 2554 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
TRMT13Q9NUP7 NRXN1-205ENST00000401710 2873 ntTSL 5 BASIC22.57■■□□□ 1.2
TRMT13Q9NUP7 ANO1-202ENST00000355303 4790 ntAPPRIS P2 TSL 1 (best) BASIC22.57■■□□□ 1.2
TRMT13Q9NUP7 PGM5P4-201ENST00000421970 445 ntBASIC22.57■■□□□ 1.2
TRMT13Q9NUP7 STXBP1-203ENST00000476182 566 ntTSL 5 BASIC22.57■■□□□ 1.2
TRMT13Q9NUP7 DHDH-203ENST00000522614 776 ntTSL 5 BASIC22.57■■□□□ 1.2
TRMT13Q9NUP7 AP001412.1-201ENST00000608405 714 ntBASIC22.57■■□□□ 1.2
TRMT13Q9NUP7 BZW1-209ENST00000452790 1473 ntTSL 2 BASIC22.57■■□□□ 1.2
TRMT13Q9NUP7 PGPEP1L-202ENST00000535714 1483 ntTSL 2 BASIC22.57■■□□□ 1.2
TRMT13Q9NUP7 SPHK1-202ENST00000392496 1779 ntAPPRIS P3 TSL 1 (best) BASIC22.57■■□□□ 1.2
TRMT13Q9NUP7 PPT2-248ENST00000395523 2111 ntAPPRIS ALT2 TSL 5 BASIC22.57■■□□□ 1.2
TRMT13Q9NUP7 RNH1-206ENST00000438658 1725 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
TRMT13Q9NUP7 HOXC13-AS-201ENST00000512916 1408 ntTSL 3 BASIC22.57■■□□□ 1.2
TRMT13Q9NUP7 POTEC-204ENST00000620346 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC22.56■■□□□ 1.2
TRMT13Q9NUP7 S1PR5-204ENST00000617721 1698 ntTSL 5 BASIC22.56■■□□□ 1.2
TRMT13Q9NUP7 SEPT7-206ENST00000435235 1584 ntTSL 2 BASIC22.56■■□□□ 1.2
TRMT13Q9NUP7 ADCYAP1-202ENST00000450565 918 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
TRMT13Q9NUP7 BCL7B-206ENST00000455335 985 ntTSL 3 BASIC22.56■■□□□ 1.2
TRMT13Q9NUP7 KRT8P12-201ENST00000468527 998 ntTSL 2 BASIC22.56■■□□□ 1.2
TRMT13Q9NUP7 TSPAN14-209ENST00000481124 808 ntTSL 2 BASIC22.56■■□□□ 1.2
TRMT13Q9NUP7 PDCD6-206ENST00000507528 1088 ntAPPRIS ALT1 TSL 1 (best) BASIC22.56■■□□□ 1.2
TRMT13Q9NUP7 LINC02256-201ENST00000561999 366 ntTSL 3 BASIC22.56■■□□□ 1.2
TRMT13Q9NUP7 MIR4785-201ENST00000585005 73 ntBASIC22.56■■□□□ 1.2
TRMT13Q9NUP7 NCBP2-AS2-201ENST00000602845 918 ntAPPRIS P1 BASIC22.56■■□□□ 1.2
TRMT13Q9NUP7 PNKP-201ENST00000322344 2041 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
TRMT13Q9NUP7 MFF-203ENST00000349901 1716 ntTSL 2 BASIC22.56■■□□□ 1.2
TRMT13Q9NUP7 POLDIP2-202ENST00000618887 1524 ntTSL 2 BASIC22.56■■□□□ 1.2
TRMT13Q9NUP7 AL135905.2-201ENST00000584934 1404 ntBASIC22.56■■□□□ 1.2
TRMT13Q9NUP7 DDRGK1-201ENST00000354488 1306 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
TRMT13Q9NUP7 TOM1L2-210ENST00000542206 1320 ntTSL 2 BASIC22.56■■□□□ 1.2
TRMT13Q9NUP7 EXOC3-AS1-202ENST00000623673 1663 ntBASIC22.55■■□□□ 1.2
TRMT13Q9NUP7 DVL3-201ENST00000313143 5254 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
TRMT13Q9NUP7 MAP1LC3A-201ENST00000360668 1574 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
TRMT13Q9NUP7 ARHGDIA-202ENST00000400721 1568 ntTSL 2 BASIC22.55■■□□□ 1.2
TRMT13Q9NUP7 RANBP10-206ENST00000602677 2374 ntTSL 5 BASIC22.55■■□□□ 1.2
TRMT13Q9NUP7 PACSIN3-201ENST00000298838 1843 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
TRMT13Q9NUP7 NTN4-207ENST00000553059 1818 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
TRMT13Q9NUP7 ZDHHC16-202ENST00000352634 1718 ntAPPRIS ALT1 TSL 1 (best) BASIC22.55■■□□□ 1.2
TRMT13Q9NUP7 C1QBP-201ENST00000225698 1169 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
TRMT13Q9NUP7 C11orf86-201ENST00000308963 1187 ntAPPRIS P1 TSL 2 BASIC22.55■■□□□ 1.2
TRMT13Q9NUP7 LINC01743-201ENST00000366308 964 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
TRMT13Q9NUP7 RER1-204ENST00000378518 522 ntTSL 3 BASIC22.55■■□□□ 1.2
TRMT13Q9NUP7 PLEKHB2-203ENST00000404460 1167 ntTSL 2 BASIC22.55■■□□□ 1.2
TRMT13Q9NUP7 DMRT2-206ENST00000412350 1244 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
TRMT13Q9NUP7 AL390719.1-204ENST00000412397 1219 ntBASIC22.55■■□□□ 1.2
TRMT13Q9NUP7 AC105935.2-201ENST00000435478 544 ntTSL 4 BASIC22.55■■□□□ 1.2
TRMT13Q9NUP7 CA3-AS1-201ENST00000517697 559 ntTSL 4 BASIC22.55■■□□□ 1.2
TRMT13Q9NUP7 AP001458.2-201ENST00000528405 577 ntAPPRIS P1 TSL 4 BASIC22.55■■□□□ 1.2
TRMT13Q9NUP7 AC091551.1-201ENST00000590722 1228 ntAPPRIS P1 TSL 2 BASIC22.55■■□□□ 1.2
TRMT13Q9NUP7 C16orf74-202ENST00000602583 1237 ntAPPRIS ALT2 TSL 1 (best) BASIC22.55■■□□□ 1.2
TRMT13Q9NUP7 AC133561.5-201ENST00000635547 218 ntBASIC22.55■■□□□ 1.2
TRMT13Q9NUP7 SIN3B-209ENST00000596802 2556 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
TRMT13Q9NUP7 ARL13B-205ENST00000471138 2206 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
TRMT13Q9NUP7 ZSWIM7-201ENST00000399277 2008 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
TRMT13Q9NUP7 CDC42SE2-206ENST00000503291 2025 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
TRMT13Q9NUP7 DMRT2-209ENST00000635183 2190 ntTSL 5 BASIC22.55■■□□□ 1.2
TRMT13Q9NUP7 CEBPE-201ENST00000206513 1554 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
TRMT13Q9NUP7 LAYN-201ENST00000375614 2066 ntAPPRIS P3 TSL 1 (best) BASIC22.54■■□□□ 1.2
TRMT13Q9NUP7 AC007128.1-201ENST00000424460 1853 ntTSL 5 BASIC22.54■■□□□ 1.2
TRMT13Q9NUP7 ARRB2-202ENST00000346341 1769 ntTSL 2 BASIC22.54■■□□□ 1.2
TRMT13Q9NUP7 MZB1-201ENST00000302125 825 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
TRMT13Q9NUP7 TSTD1-201ENST00000318289 626 ntAPPRIS P3 TSL 1 (best) BASIC22.54■■□□□ 1.2
TRMT13Q9NUP7 SIVA1-201ENST00000329967 802 ntAPPRIS P2 TSL 1 (best) BASIC22.54■■□□□ 1.2
TRMT13Q9NUP7 AC087499.1-201ENST00000418141 1075 ntBASIC22.54■■□□□ 1.2
TRMT13Q9NUP7 CAMLG-202ENST00000514518 895 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
TRMT13Q9NUP7 MAX-217ENST00000557277 728 ntTSL 3 BASIC22.54■■□□□ 1.2
TRMT13Q9NUP7 AQP4-AS1-204ENST00000582605 525 ntTSL 4 BASIC22.54■■□□□ 1.2
TRMT13Q9NUP7 CIRBP-213ENST00000587323 1092 ntTSL 5 BASIC22.54■■□□□ 1.2
TRMT13Q9NUP7 PPP1R36-201ENST00000298705 1405 ntAPPRIS P2 TSL 1 (best) BASIC22.54■■□□□ 1.2
TRMT13Q9NUP7 SNCA-203ENST00000394986 1420 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
TRMT13Q9NUP7 RANBP10-202ENST00000448631 2232 ntTSL 2 BASIC22.54■■□□□ 1.2
TRMT13Q9NUP7 ARL6IP4-220ENST00000543566 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC22.54■■□□□ 1.2
TRMT13Q9NUP7 DOK1-203ENST00000409429 1955 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
TRMT13Q9NUP7 CCNL1-203ENST00000461804 1998 ntTSL 2 BASIC22.54■■□□□ 1.2
TRMT13Q9NUP7 TMEM25-205ENST00000411589 2442 ntAPPRIS ALT2 TSL 2 BASIC22.53■■□□□ 1.2
TRMT13Q9NUP7 NR0B1-202ENST00000378970 2021 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
TRMT13Q9NUP7 CADPS-203ENST00000383710 5471 ntAPPRIS ALT2 TSL 1 (best) BASIC22.53■■□□□ 1.2
Retrieved 100 of 98,524 protein–RNA pairs in 11 ms