Protein–RNA interactions for Protein: Q9NRJ7

PCDHB16, Protocadherin beta-16, humanhuman

Predictions only

Length 776 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB16Q9NRJ7 SCN1B-206ENST00000638536 1600 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
PCDHB16Q9NRJ7 DCTN3-202ENST00000341694 899 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
PCDHB16Q9NRJ7 EBPL-204ENST00000378272 766 ntTSL 3 BASIC17.7■□□□□ 0.42
PCDHB16Q9NRJ7 DCTN3-205ENST00000378916 773 ntTSL 2 BASIC17.7■□□□□ 0.42
PCDHB16Q9NRJ7 AC091305.1-201ENST00000479476 895 ntBASIC17.7■□□□□ 0.42
PCDHB16Q9NRJ7 FAM66A-201ENST00000525829 921 ntTSL 2 BASIC17.7■□□□□ 0.42
PCDHB16Q9NRJ7 AC127029.2-201ENST00000577329 502 ntTSL 3 BASIC17.7■□□□□ 0.42
PCDHB16Q9NRJ7 TDRP-203ENST00000523656 2622 ntTSL 5 BASIC17.7■□□□□ 0.42
PCDHB16Q9NRJ7 EDEM1-201ENST00000256497 6146 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
PCDHB16Q9NRJ7 RGMA-210ENST00000557301 1929 ntAPPRIS ALT2 TSL 2 BASIC17.7■□□□□ 0.42
PCDHB16Q9NRJ7 BRSK2-208ENST00000528841 3586 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
PCDHB16Q9NRJ7 MAMSTR-202ENST00000356751 1825 ntTSL 2 BASIC17.7■□□□□ 0.42
PCDHB16Q9NRJ7 C11orf96-201ENST00000339446 1308 ntTSL 5 BASIC17.7■□□□□ 0.42
PCDHB16Q9NRJ7 WAC-205ENST00000375664 5924 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
PCDHB16Q9NRJ7 PLK5-205ENST00000642079 1969 ntBASIC17.7■□□□□ 0.42
PCDHB16Q9NRJ7 HLA-G-204ENST00000376828 1490 ntAPPRIS ALT2 BASIC17.69■□□□□ 0.42
PCDHB16Q9NRJ7 NUDT11-201ENST00000375992 2385 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
PCDHB16Q9NRJ7 YTHDF3-213ENST00000621820 2363 ntTSL 2 BASIC17.69■□□□□ 0.42
PCDHB16Q9NRJ7 RCN3-201ENST00000270645 1859 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
PCDHB16Q9NRJ7 PAX1-202ENST00000444366 1850 ntAPPRIS ALT2 TSL 2 BASIC17.69■□□□□ 0.42
PCDHB16Q9NRJ7 STRBP-201ENST00000348403 3337 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
PCDHB16Q9NRJ7 ZNF773-204ENST00000598770 2019 ntAPPRIS ALT2 TSL 2 BASIC17.69■□□□□ 0.42
PCDHB16Q9NRJ7 TMEM235-201ENST00000374946 2409 ntTSL 5 BASIC17.69■□□□□ 0.42
PCDHB16Q9NRJ7 AATK-203ENST00000417379 5081 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
PCDHB16Q9NRJ7 HES3-201ENST00000377898 697 ntAPPRIS P1 TSL 2 BASIC17.69■□□□□ 0.42
PCDHB16Q9NRJ7 ITGA9-AS1-210ENST00000457661 738 ntTSL 4 BASIC17.69■□□□□ 0.42
PCDHB16Q9NRJ7 CALM1-203ENST00000544280 1064 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
PCDHB16Q9NRJ7 KCNMA1-278ENST00000640141 5705 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
PCDHB16Q9NRJ7 PKIB-206ENST00000392490 1811 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
PCDHB16Q9NRJ7 ZGPAT-206ENST00000448100 1881 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
PCDHB16Q9NRJ7 EPO-201ENST00000252723 1330 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
PCDHB16Q9NRJ7 SHCBP1L-201ENST00000367547 2317 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
PCDHB16Q9NRJ7 RASGRP2-211ENST00000394432 2304 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
PCDHB16Q9NRJ7 DMRTB1-201ENST00000371445 1910 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
PCDHB16Q9NRJ7 SLC35E4-202ENST00000406566 2081 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
PCDHB16Q9NRJ7 NHLRC1-201ENST00000340650 2248 ntAPPRIS P1 BASIC17.68■□□□□ 0.42
PCDHB16Q9NRJ7 AL158211.5-201ENST00000623583 2518 ntBASIC17.68■□□□□ 0.42
PCDHB16Q9NRJ7 RAB24-202ENST00000303270 1385 ntTSL 2 BASIC17.68■□□□□ 0.42
PCDHB16Q9NRJ7 UCK2-201ENST00000367879 1375 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
PCDHB16Q9NRJ7 NTN4-207ENST00000553059 1818 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
PCDHB16Q9NRJ7 CYP21A1P-201ENST00000342991 1971 ntTSL 3 BASIC17.68■□□□□ 0.42
PCDHB16Q9NRJ7 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC17.68■□□□□ 0.42
PCDHB16Q9NRJ7 SLC12A5-210ENST00000616202 2445 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
PCDHB16Q9NRJ7 LMTK2-201ENST00000297293 8946 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
PCDHB16Q9NRJ7 DUSP15-201ENST00000278979 1732 ntTSL 2 BASIC17.68■□□□□ 0.42
PCDHB16Q9NRJ7 KIRREL2-202ENST00000347900 2015 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
PCDHB16Q9NRJ7 MAD2L2-204ENST00000376667 872 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
PCDHB16Q9NRJ7 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
PCDHB16Q9NRJ7 PARD6B-202ENST00000396039 522 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
PCDHB16Q9NRJ7 LTC4S-202ENST00000401985 486 ntTSL 3 BASIC17.68■□□□□ 0.42
PCDHB16Q9NRJ7 AL355877.1-204ENST00000451482 1078 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
PCDHB16Q9NRJ7 STOML2-202ENST00000452248 1296 ntTSL 2 BASIC17.68■□□□□ 0.42
PCDHB16Q9NRJ7 AP001330.3-201ENST00000520123 633 ntBASIC17.68■□□□□ 0.42
PCDHB16Q9NRJ7 PTGDR-202ENST00000553372 1216 ntTSL 3 BASIC17.68■□□□□ 0.42
PCDHB16Q9NRJ7 PML-217ENST00000567543 1404 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
PCDHB16Q9NRJ7 SCN1B-203ENST00000595652 814 ntTSL 2 BASIC17.68■□□□□ 0.42
PCDHB16Q9NRJ7 AC008175.2-201ENST00000612840 297 ntBASIC17.68■□□□□ 0.42
PCDHB16Q9NRJ7 STOML2-205ENST00000619795 1293 ntTSL 3 BASIC17.68■□□□□ 0.42
PCDHB16Q9NRJ7 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
PCDHB16Q9NRJ7 SLC25A22-228ENST00000628067 2692 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
PCDHB16Q9NRJ7 POMGNT2-201ENST00000344697 2544 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
PCDHB16Q9NRJ7 IMPAD1-201ENST00000262644 7199 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
PCDHB16Q9NRJ7 NAA10-208ENST00000464845 1772 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
PCDHB16Q9NRJ7 GNB2-206ENST00000424361 1478 ntTSL 5 BASIC17.68■□□□□ 0.42
PCDHB16Q9NRJ7 MMP17-201ENST00000360564 2411 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
PCDHB16Q9NRJ7 LMLN-204ENST00000420910 2423 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
PCDHB16Q9NRJ7 LINC01006-201ENST00000333319 2292 ntBASIC17.68■□□□□ 0.42
PCDHB16Q9NRJ7 GPAA1-202ENST00000361036 1840 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
PCDHB16Q9NRJ7 ADM-207ENST00000530439 1839 ntTSL 2 BASIC17.68■□□□□ 0.42
PCDHB16Q9NRJ7 OR10C1-203ENST00000444197 1672 ntAPPRIS P1 BASIC17.67■□□□□ 0.42
PCDHB16Q9NRJ7 MFF-207ENST00000409565 1548 ntTSL 2 BASIC17.67■□□□□ 0.42
PCDHB16Q9NRJ7 NECAB1-201ENST00000417640 5289 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
PCDHB16Q9NRJ7 RHNO1-204ENST00000489288 1870 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
PCDHB16Q9NRJ7 EGFL7-201ENST00000308874 1747 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
PCDHB16Q9NRJ7 ARID1B-202ENST00000346085 10194 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
PCDHB16Q9NRJ7 SHC3-202ENST00000375835 9768 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
PCDHB16Q9NRJ7 TTC39C-202ENST00000317571 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
PCDHB16Q9NRJ7 BTBD11-201ENST00000280758 5767 ntAPPRIS P3 TSL 5 BASIC17.67■□□□□ 0.42
PCDHB16Q9NRJ7 PCDHAC2-201ENST00000289269 5963 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
PCDHB16Q9NRJ7 PBX1-222ENST00000627490 1769 ntTSL 2 BASIC17.67■□□□□ 0.42
PCDHB16Q9NRJ7 EEF1DP3-203ENST00000566025 782 ntBASIC17.67■□□□□ 0.42
PCDHB16Q9NRJ7 AC142381.2-201ENST00000566120 298 ntBASIC17.67■□□□□ 0.42
PCDHB16Q9NRJ7 AL354811.1-201ENST00000610286 706 ntBASIC17.67■□□□□ 0.42
PCDHB16Q9NRJ7 ZNF12-204ENST00000405858 5051 ntAPPRIS P4 TSL 1 (best) BASIC17.67■□□□□ 0.42
PCDHB16Q9NRJ7 TBR1-202ENST00000410035 1454 ntTSL 2 BASIC17.67■□□□□ 0.42
PCDHB16Q9NRJ7 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
PCDHB16Q9NRJ7 CADPS2-201ENST00000313070 6065 ntTSL 5 BASIC17.67■□□□□ 0.42
PCDHB16Q9NRJ7 AL158151.1-201ENST00000372490 2047 ntTSL 2 BASIC17.67■□□□□ 0.42
PCDHB16Q9NRJ7 ANKRD53-204ENST00000457410 1671 ntTSL 5 BASIC17.67■□□□□ 0.42
PCDHB16Q9NRJ7 NUP160-203ENST00000526870 1537 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
PCDHB16Q9NRJ7 CCDC91-207ENST00000539107 2440 ntTSL 5 BASIC17.67■□□□□ 0.42
PCDHB16Q9NRJ7 CRLF3-201ENST00000324238 2957 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
PCDHB16Q9NRJ7 CYP27A1-201ENST00000258415 2286 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
PCDHB16Q9NRJ7 PRSS22-201ENST00000161006 1386 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
PCDHB16Q9NRJ7 TERF2IP-201ENST00000300086 2118 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
PCDHB16Q9NRJ7 CRMP1-201ENST00000324989 3146 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
PCDHB16Q9NRJ7 CXXC4-201ENST00000394767 5565 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
PCDHB16Q9NRJ7 C1QL1-201ENST00000253407 1295 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
PCDHB16Q9NRJ7 MIR939-201ENST00000401314 82 ntBASIC17.66■□□□□ 0.42
PCDHB16Q9NRJ7 HSPE1-203ENST00000409729 478 ntTSL 2 BASIC17.66■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 29.1 ms