Protein–RNA interactions for Protein: Q9H321

VCX3B, Variable charge X-linked protein 3B, humanhuman

Predictions only

Length 246 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCX3BQ9H321 ACYP1-205ENST00000555463 789 ntTSL 2 BASIC19.48■□□□□ 0.71
VCX3BQ9H321 TINAGL1-201ENST00000271064 2187 ntAPPRIS P3 TSL 1 (best) BASIC19.48■□□□□ 0.71
VCX3BQ9H321 FBXW8-201ENST00000309909 2343 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
VCX3BQ9H321 DBNDD1-201ENST00000002501 2079 ntAPPRIS P1 TSL 2 BASIC19.48■□□□□ 0.71
VCX3BQ9H321 PSPC1-201ENST00000338910 2407 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
VCX3BQ9H321 PGM1-205ENST00000540265 2345 ntTSL 2 BASIC19.47■□□□□ 0.71
VCX3BQ9H321 PPM1H-201ENST00000228705 6353 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
VCX3BQ9H321 EPB41L4B-201ENST00000374557 4006 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
VCX3BQ9H321 MORF4L1-201ENST00000331268 2359 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
VCX3BQ9H321 WAC-202ENST00000347934 2839 ntTSL 5 BASIC19.47■□□□□ 0.71
VCX3BQ9H321 C5orf38-202ENST00000397835 681 ntAPPRIS ALT2 TSL 5 BASIC19.47■□□□□ 0.71
VCX3BQ9H321 EIF3J-203ENST00000535391 925 ntTSL 2 BASIC19.47■□□□□ 0.71
VCX3BQ9H321 CACNA1A-215ENST00000635727 7536 ntAPPRIS ALT2 TSL 5 BASIC19.47■□□□□ 0.71
VCX3BQ9H321 EFS-201ENST00000216733 3118 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
VCX3BQ9H321 AL161756.1-202ENST00000359491 1717 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
VCX3BQ9H321 KREMEN2-202ENST00000319500 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
VCX3BQ9H321 CLN8-213ENST00000637156 1897 ntAPPRIS P1 TSL 5 BASIC19.47■□□□□ 0.71
VCX3BQ9H321 SLC6A9-201ENST00000357730 2168 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
VCX3BQ9H321 COBL-202ENST00000395540 2332 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
VCX3BQ9H321 DIP2A-203ENST00000435722 2760 ntTSL 2 BASIC19.47■□□□□ 0.71
VCX3BQ9H321 OXER1-201ENST00000378661 1781 ntAPPRIS P1 BASIC19.47■□□□□ 0.71
VCX3BQ9H321 MAPK8IP3-201ENST00000250894 5661 ntAPPRIS P3 TSL 1 (best) BASIC19.47■□□□□ 0.71
VCX3BQ9H321 TBX2-201ENST00000240328 3339 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
VCX3BQ9H321 MAMSTR-202ENST00000356751 1825 ntTSL 2 BASIC19.46■□□□□ 0.71
VCX3BQ9H321 NANOS2-201ENST00000341294 1657 ntAPPRIS P1 BASIC19.46■□□□□ 0.71
VCX3BQ9H321 CBWD2-203ENST00000416503 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
VCX3BQ9H321 AC112229.4-201ENST00000488671 1528 ntTSL 2 BASIC19.46■□□□□ 0.71
VCX3BQ9H321 ASXL1-202ENST00000375687 7031 ntAPPRIS P2 TSL 5 BASIC19.46■□□□□ 0.71
VCX3BQ9H321 PLPP2-202ENST00000327790 1397 ntTSL 5 BASIC19.46■□□□□ 0.71
VCX3BQ9H321 AGPAT3-201ENST00000291572 5546 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
VCX3BQ9H321 AKAP17A-201ENST00000313871 3204 ntAPPRIS P2 TSL 1 (best) BASIC19.46■□□□□ 0.71
VCX3BQ9H321 WRNIP1-202ENST00000380769 3239 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
VCX3BQ9H321 ACHE-207ENST00000428317 2159 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
VCX3BQ9H321 ADRA1B-201ENST00000306675 2047 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
VCX3BQ9H321 ADCY8-201ENST00000286355 5938 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
VCX3BQ9H321 SKIDA1-202ENST00000449193 6598 ntAPPRIS P2 TSL 3 BASIC19.46■□□□□ 0.71
VCX3BQ9H321 PRKCD-202ENST00000394729 2810 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
VCX3BQ9H321 ACVR1B-201ENST00000257963 4563 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
VCX3BQ9H321 AL158211.5-201ENST00000623583 2518 ntBASIC19.46■□□□□ 0.71
VCX3BQ9H321 UQCR11-202ENST00000589880 504 ntAPPRIS P1 TSL 3 BASIC19.46■□□□□ 0.71
VCX3BQ9H321 SPAST-202ENST00000345662 5116 ntAPPRIS ALT1 TSL 1 (best) BASIC19.46■□□□□ 0.71
VCX3BQ9H321 GTF2IRD2B-208ENST00000619142 1932 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
VCX3BQ9H321 TBX21-201ENST00000177694 2572 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
VCX3BQ9H321 SH3BP2-204ENST00000452765 2265 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.71
VCX3BQ9H321 ATXN2-227ENST00000616825 4575 ntAPPRIS ALT2 TSL 5 BASIC19.46■□□□□ 0.71
VCX3BQ9H321 CCDC34-201ENST00000317945 2109 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.71
VCX3BQ9H321 ZNF852-201ENST00000436261 1968 ntAPPRIS P1 TSL 2 BASIC19.46■□□□□ 0.71
VCX3BQ9H321 PCDHB11-202ENST00000624887 1973 ntTSL 2 BASIC19.46■□□□□ 0.71
VCX3BQ9H321 NTN5-201ENST00000270235 1836 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
VCX3BQ9H321 PRR20B-201ENST00000377930 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
VCX3BQ9H321 PRR20A-201ENST00000377931 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
VCX3BQ9H321 PKIB-206ENST00000392490 1811 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
VCX3BQ9H321 PRR20E-201ENST00000434815 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
VCX3BQ9H321 PRR20D-201ENST00000452123 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
VCX3BQ9H321 GLT8D1-206ENST00000478968 1826 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
VCX3BQ9H321 PRR20C-201ENST00000544357 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
VCX3BQ9H321 PRR20C-202ENST00000614894 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
VCX3BQ9H321 WNK1-206ENST00000535572 9886 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
VCX3BQ9H321 CDH5-202ENST00000539168 1672 ntTSL 2 BASIC19.46■□□□□ 0.71
VCX3BQ9H321 S1PR5-204ENST00000617721 1698 ntTSL 5 BASIC19.46■□□□□ 0.71
VCX3BQ9H321 SYNM-202ENST00000336292 7394 ntAPPRIS P4 TSL 1 (best) BASIC19.45■□□□□ 0.7
VCX3BQ9H321 ENTPD8-201ENST00000344119 2111 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
VCX3BQ9H321 ARNTL2-204ENST00000395901 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
VCX3BQ9H321 KMT5A-201ENST00000330479 3069 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
VCX3BQ9H321 NDEL1-219ENST00000585098 454 ntTSL 3 BASIC19.45■□□□□ 0.7
VCX3BQ9H321 AL499627.2-201ENST00000606283 725 ntBASIC19.45■□□□□ 0.7
VCX3BQ9H321 KCNA7-201ENST00000221444 4372 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
VCX3BQ9H321 TMEM218-213ENST00000531909 1828 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
VCX3BQ9H321 C2CD2L-201ENST00000336702 4771 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
VCX3BQ9H321 CASKIN2-201ENST00000321617 5015 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
VCX3BQ9H321 PHF12-205ENST00000577226 7679 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
VCX3BQ9H321 SENP2-201ENST00000296257 5717 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
VCX3BQ9H321 SYTL1-211ENST00000618673 1712 ntTSL 5 BASIC19.45■□□□□ 0.7
VCX3BQ9H321 TMEM179-201ENST00000341595 2513 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
VCX3BQ9H321 ZMYND19-201ENST00000298585 1375 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
VCX3BQ9H321 RNF146-203ENST00000368314 2369 ntAPPRIS ALT1 TSL 2 BASIC19.44■□□□□ 0.7
VCX3BQ9H321 GPRC5B-201ENST00000300571 5213 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
VCX3BQ9H321 FGFR3-205ENST00000440486 4287 ntAPPRIS P3 TSL 5 BASIC19.44■□□□□ 0.7
VCX3BQ9H321 FBXL3-201ENST00000355619 3503 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
VCX3BQ9H321 PDLIM3-203ENST00000284771 1672 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
VCX3BQ9H321 NSUN5-204ENST00000438747 1663 ntAPPRIS P4 TSL 1 (best) BASIC19.44■□□□□ 0.7
VCX3BQ9H321 NPW-202ENST00000566435 991 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
VCX3BQ9H321 AIPL1-209ENST00000575265 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
VCX3BQ9H321 SSX2IP-209ENST00000603677 1149 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
VCX3BQ9H321 AC006001.3-204ENST00000638711 2103 ntTSL 5 BASIC19.44■□□□□ 0.7
VCX3BQ9H321 ISLR2-201ENST00000361742 4817 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
VCX3BQ9H321 DUSP28-201ENST00000343217 1555 ntAPPRIS P1 TSL 2 BASIC19.44■□□□□ 0.7
VCX3BQ9H321 ARID3A-201ENST00000263620 5941 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
VCX3BQ9H321 TBX18-202ENST00000369663 6245 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
VCX3BQ9H321 MBNL3-202ENST00000370844 1643 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
VCX3BQ9H321 SEMA7A-203ENST00000543145 2304 ntTSL 2 BASIC19.43■□□□□ 0.7
VCX3BQ9H321 IMPDH1-208ENST00000470772 1888 ntAPPRIS ALT1 TSL 5 BASIC19.43■□□□□ 0.7
VCX3BQ9H321 MTERF3-201ENST00000287025 1409 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
VCX3BQ9H321 GNB1L-202ENST00000403325 1699 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
VCX3BQ9H321 AR-207ENST00000612010 3896 ntTSL 5 BASIC19.43■□□□□ 0.7
VCX3BQ9H321 LBX2-203ENST00000460508 1452 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
VCX3BQ9H321 DDIT4-201ENST00000307365 1748 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
VCX3BQ9H321 SLC9A6-201ENST00000370695 4725 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
VCX3BQ9H321 AC005332.7-201ENST00000614046 2005 ntBASIC19.43■□□□□ 0.7
VCX3BQ9H321 SLC1A6-202ENST00000430939 1794 ntTSL 2 BASIC19.43■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 26.1 ms