Protein–RNA interactions for Protein: Q9H204

MED28, Mediator of RNA polymerase II transcription subunit 28, humanhuman

Predictions only

Length 178 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MED28Q9H204 SRRM2-201ENST00000301740 9353 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
MED28Q9H204 MXD3-202ENST00000427908 2269 ntTSL 2 BASIC17.45■□□□□ 0.38
MED28Q9H204 CIRBP-225ENST00000589710 1835 ntTSL 2 BASIC17.45■□□□□ 0.38
MED28Q9H204 ACHE-207ENST00000428317 2159 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
MED28Q9H204 GNAI1-201ENST00000351004 3347 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
MED28Q9H204 CACNA1A-201ENST00000360228 8627 ntAPPRIS P4 TSL 1 (best) BASIC17.45■□□□□ 0.38
MED28Q9H204 SLC9A6-201ENST00000370695 4725 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
MED28Q9H204 CEP120-209ENST00000515110 606 ntTSL 3 BASIC17.45■□□□□ 0.38
MED28Q9H204 FOXD4-201ENST00000382500 1974 ntAPPRIS P1 BASIC17.45■□□□□ 0.38
MED28Q9H204 ZNF852-201ENST00000436261 1968 ntAPPRIS P1 TSL 2 BASIC17.45■□□□□ 0.38
MED28Q9H204 ENTPD8-201ENST00000344119 2111 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
MED28Q9H204 TRAM1L1-201ENST00000310754 2023 ntAPPRIS P1 BASIC17.45■□□□□ 0.38
MED28Q9H204 AP000547.3-201ENST00000592918 1576 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
MED28Q9H204 NUAK1-201ENST00000261402 6828 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
MED28Q9H204 PXYLP1-203ENST00000502783 2066 ntTSL 2 BASIC17.44■□□□□ 0.38
MED28Q9H204 CACNA1A-214ENST00000614285 8410 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
MED28Q9H204 SOWAHC-201ENST00000356454 4657 ntAPPRIS P1 BASIC17.44■□□□□ 0.38
MED28Q9H204 LAYN-209ENST00000533265 1703 ntTSL 5 BASIC17.44■□□□□ 0.38
MED28Q9H204 DR1-201ENST00000370267 1647 ntAPPRIS P1 TSL 2 BASIC17.44■□□□□ 0.38
MED28Q9H204 PACSIN2-203ENST00000402229 1883 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
MED28Q9H204 SLC1A6-202ENST00000430939 1794 ntTSL 2 BASIC17.44■□□□□ 0.38
MED28Q9H204 MCRIP1-210ENST00000576431 577 ntTSL 5 BASIC17.44■□□□□ 0.38
MED28Q9H204 UBALD1-202ENST00000587615 799 ntTSL 2 BASIC17.44■□□□□ 0.38
MED28Q9H204 TMPRSS6-207ENST00000442782 1695 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
MED28Q9H204 ZNF503-AS2-202ENST00000466942 1430 ntTSL 2 BASIC17.44■□□□□ 0.38
MED28Q9H204 RTBDN-207ENST00000589272 2076 ntTSL 2 BASIC17.44■□□□□ 0.38
MED28Q9H204 HNRNPUL1-203ENST00000378215 2864 ntTSL 2 BASIC17.44■□□□□ 0.38
MED28Q9H204 NOS1AP-206ENST00000530878 2894 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
MED28Q9H204 OGG1-203ENST00000302036 2220 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
MED28Q9H204 RAPH1-201ENST00000308091 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
MED28Q9H204 AMDHD1-201ENST00000266736 2260 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
MED28Q9H204 GCGR-202ENST00000570996 1872 ntAPPRIS ALT2 TSL 2 BASIC17.44■□□□□ 0.38
MED28Q9H204 CHRNA10-204ENST00000534359 1474 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
MED28Q9H204 SNRNP70-201ENST00000221448 1603 ntTSL 2 BASIC17.43■□□□□ 0.38
MED28Q9H204 EIF4ENIF1-202ENST00000344710 3115 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
MED28Q9H204 PODN-203ENST00000395871 2744 ntTSL 5 BASIC17.43■□□□□ 0.38
MED28Q9H204 KAT5-203ENST00000377046 2237 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
MED28Q9H204 GATA2-202ENST00000430265 2525 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
MED28Q9H204 C1QTNF12-201ENST00000330388 1036 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
MED28Q9H204 KRT8-216ENST00000552551 2126 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
MED28Q9H204 MMP25-AS1-209ENST00000576250 779 ntTSL 5 BASIC17.43■□□□□ 0.38
MED28Q9H204 TEAD2-202ENST00000377214 2440 ntAPPRIS ALT1 TSL 2 BASIC17.43■□□□□ 0.38
MED28Q9H204 CBX1-202ENST00000393408 2422 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
MED28Q9H204 CHPF-201ENST00000243776 3013 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
MED28Q9H204 ALDH6A1-201ENST00000350259 1869 ntAPPRIS ALT2 TSL 2 BASIC17.43■□□□□ 0.38
MED28Q9H204 C2CD2L-201ENST00000336702 4771 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
MED28Q9H204 MED25-201ENST00000312865 2332 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
MED28Q9H204 EDA-203ENST00000374552 5278 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
MED28Q9H204 DECR2-201ENST00000219481 1615 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
MED28Q9H204 PAFAH1B2-202ENST00000419197 2517 ntTSL 2 BASIC17.43■□□□□ 0.38
MED28Q9H204 AC007613.1-201ENST00000572811 2597 ntBASIC17.42■□□□□ 0.38
MED28Q9H204 NAGPA-AS1-202ENST00000632058 2265 ntTSL 2 BASIC17.42■□□□□ 0.38
MED28Q9H204 WIPI2-203ENST00000401525 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
MED28Q9H204 PIP4K2A-202ENST00000376573 3802 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
MED28Q9H204 TPST2-201ENST00000338754 5697 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
MED28Q9H204 SPAST-202ENST00000345662 5116 ntAPPRIS ALT1 TSL 1 (best) BASIC17.42■□□□□ 0.38
MED28Q9H204 IMPDH1-208ENST00000470772 1888 ntAPPRIS ALT1 TSL 5 BASIC17.42■□□□□ 0.38
MED28Q9H204 PRR16-202ENST00000407149 1747 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
MED28Q9H204 CELF2-213ENST00000633077 1733 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
MED28Q9H204 CNNM3-202ENST00000377060 3308 ntTSL 2 BASIC17.42■□□□□ 0.38
MED28Q9H204 C1orf122-201ENST00000373042 973 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
MED28Q9H204 PKMYT1-204ENST00000440027 2061 ntTSL 2 BASIC17.42■□□□□ 0.38
MED28Q9H204 SLC3A2-206ENST00000535296 2084 ntTSL 5 BASIC17.42■□□□□ 0.38
MED28Q9H204 ISOC1-201ENST00000173527 1940 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
MED28Q9H204 PLPBP-201ENST00000328195 2558 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
MED28Q9H204 LRRC27-203ENST00000368613 2113 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
MED28Q9H204 AKAP8L-201ENST00000397410 2146 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
MED28Q9H204 EFR3A-201ENST00000254624 5438 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
MED28Q9H204 STARD3-219ENST00000580611 1989 ntTSL 5 BASIC17.42■□□□□ 0.38
MED28Q9H204 NTN5-201ENST00000270235 1836 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
MED28Q9H204 MAPK8IP3-201ENST00000250894 5661 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
MED28Q9H204 MTA1-201ENST00000331320 2876 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
MED28Q9H204 RNF166-202ENST00000537718 1525 ntTSL 2 BASIC17.42■□□□□ 0.38
MED28Q9H204 C14orf79-202ENST00000547315 2370 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
MED28Q9H204 RREB1-201ENST00000334984 5789 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
MED28Q9H204 KREMEN2-202ENST00000319500 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
MED28Q9H204 AC003102.1-202ENST00000563394 1796 ntBASIC17.41■□□□□ 0.38
MED28Q9H204 TMEM179-204ENST00000556573 1430 ntAPPRIS P1 TSL 3 BASIC17.41■□□□□ 0.38
MED28Q9H204 LTB4R2-202ENST00000528054 3092 ntBASIC17.41■□□□□ 0.38
MED28Q9H204 HES4-202ENST00000428771 1040 ntTSL 2 BASIC17.41■□□□□ 0.38
MED28Q9H204 AC148477.1-201ENST00000537720 476 ntTSL 3 BASIC17.41■□□□□ 0.38
MED28Q9H204 AC120024.1-201ENST00000562672 995 ntBASIC17.41■□□□□ 0.38
MED28Q9H204 CTBP2-205ENST00000411419 2036 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
MED28Q9H204 ZNF622-201ENST00000308683 1699 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
MED28Q9H204 GTF2IRD2B-208ENST00000619142 1932 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
MED28Q9H204 UBE2O-201ENST00000319380 5436 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
MED28Q9H204 SHE-201ENST00000304760 6243 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
MED28Q9H204 KRT18-201ENST00000388835 1562 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
MED28Q9H204 FIP1L1-203ENST00000358575 2180 ntAPPRIS P4 TSL 2 BASIC17.4■□□□□ 0.38
MED28Q9H204 RAB11FIP2-201ENST00000355624 6061 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
MED28Q9H204 MAMSTR-202ENST00000356751 1825 ntTSL 2 BASIC17.4■□□□□ 0.38
MED28Q9H204 GLT8D1-206ENST00000478968 1826 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
MED28Q9H204 MBNL3-202ENST00000370844 1643 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
MED28Q9H204 PTP4A3-203ENST00000520105 1866 ntTSL 5 BASIC17.4■□□□□ 0.38
MED28Q9H204 PDZD3-203ENST00000525131 1882 ntTSL 2 BASIC17.4■□□□□ 0.38
MED28Q9H204 AC005332.8-201ENST00000622750 2735 ntBASIC17.4■□□□□ 0.38
MED28Q9H204 FBXO27-201ENST00000292853 2330 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
MED28Q9H204 STX6-201ENST00000258301 4851 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
MED28Q9H204 PYCARD-201ENST00000247470 990 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
MED28Q9H204 C9orf147-202ENST00000457681 561 ntTSL 2 BASIC17.4■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 17.1 ms