Protein–RNA interactions for Protein: Q9H1E3

NUCKS1, Nuclear ubiquitous casein and cyclin-dependent kinase substrate 1, humanhuman

Known RBP Predictions only

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUCKS1Q9H1E3 SHISA4-201ENST00000362011 1341 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
NUCKS1Q9H1E3 FAM189B-201ENST00000350210 2379 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
NUCKS1Q9H1E3 TMPRSS5-202ENST00000536856 1811 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
NUCKS1Q9H1E3 JSRP1-201ENST00000300961 1138 ntAPPRIS P1 TSL 2 BASIC22.16■■□□□ 1.14
NUCKS1Q9H1E3 BCKDHB-203ENST00000369760 743 ntTSL 3 BASIC22.16■■□□□ 1.14
NUCKS1Q9H1E3 KRTAP5-2-201ENST00000412090 1118 ntAPPRIS P1 BASIC22.16■■□□□ 1.14
NUCKS1Q9H1E3 NDUFB2-207ENST00000465506 1101 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
NUCKS1Q9H1E3 GABARAPL2-205ENST00000568455 646 ntTSL 3 BASIC22.16■■□□□ 1.14
NUCKS1Q9H1E3 AC092666.2-201ENST00000613287 246 ntBASIC22.16■■□□□ 1.14
NUCKS1Q9H1E3 TMEM182-210ENST00000639249 1025 ntTSL 5 BASIC22.16■■□□□ 1.14
NUCKS1Q9H1E3 ARHGAP11A-205ENST00000563864 2279 ntTSL 5 BASIC22.16■■□□□ 1.14
NUCKS1Q9H1E3 ZNF276-208ENST00000568064 2203 ntTSL 5 BASIC22.16■■□□□ 1.14
NUCKS1Q9H1E3 ATG4B-204ENST00000402096 1685 ntTSL 2 BASIC22.16■■□□□ 1.14
NUCKS1Q9H1E3 AC092720.2-201ENST00000602388 1665 ntBASIC22.16■■□□□ 1.14
NUCKS1Q9H1E3 TREX2-202ENST00000334497 1982 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
NUCKS1Q9H1E3 MAPK15-201ENST00000338033 1961 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
NUCKS1Q9H1E3 SUSD1-203ENST00000374264 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC22.16■■□□□ 1.14
NUCKS1Q9H1E3 ST3GAL4-204ENST00000444328 1812 ntAPPRIS ALT1 TSL 5 BASIC22.15■■□□□ 1.14
NUCKS1Q9H1E3 BCL7A-201ENST00000261822 2581 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
NUCKS1Q9H1E3 C7orf26-201ENST00000344417 2182 ntAPPRIS P1 TSL 2 BASIC22.15■■□□□ 1.14
NUCKS1Q9H1E3 C19orf66-201ENST00000253110 2117 ntAPPRIS P3 TSL 2 BASIC22.15■■□□□ 1.14
NUCKS1Q9H1E3 BZW1-202ENST00000409226 2455 ntTSL 2 BASIC22.15■■□□□ 1.14
NUCKS1Q9H1E3 HOXC13-201ENST00000243056 2423 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
NUCKS1Q9H1E3 EFCAB6-202ENST00000356087 1129 ntTSL 5 BASIC22.15■■□□□ 1.14
NUCKS1Q9H1E3 COX20-201ENST00000366528 568 ntTSL 2 BASIC22.15■■□□□ 1.14
NUCKS1Q9H1E3 YBEY-204ENST00000397692 433 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
NUCKS1Q9H1E3 ATE1-AS1-201ENST00000437593 951 ntTSL 2 BASIC22.15■■□□□ 1.14
NUCKS1Q9H1E3 AC104986.2-201ENST00000521696 380 ntTSL 2 BASIC22.15■■□□□ 1.14
NUCKS1Q9H1E3 COPS7A-208ENST00000538410 1610 ntTSL 3 BASIC22.15■■□□□ 1.14
NUCKS1Q9H1E3 ARSE-205ENST00000540563 1990 ntTSL 2 BASIC22.15■■□□□ 1.14
NUCKS1Q9H1E3 FAM66B-202ENST00000606573 2630 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
NUCKS1Q9H1E3 SUMF2-201ENST00000275607 1894 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
NUCKS1Q9H1E3 EGLN2-202ENST00000406058 2150 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
NUCKS1Q9H1E3 ZNF282-203ENST00000479907 1815 ntTSL 2 BASIC22.15■■□□□ 1.14
NUCKS1Q9H1E3 ZBTB7A-201ENST00000322357 5422 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
NUCKS1Q9H1E3 GATA1-202ENST00000376670 1497 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
NUCKS1Q9H1E3 CASTOR1-201ENST00000404953 1460 ntTSL 5 BASIC22.15■■□□□ 1.14
NUCKS1Q9H1E3 TPCN2-209ENST00000637504 2736 ntTSL 5 BASIC22.15■■□□□ 1.14
NUCKS1Q9H1E3 AC004854.2-201ENST00000608450 1441 ntBASIC22.14■■□□□ 1.14
NUCKS1Q9H1E3 KIRREL2-202ENST00000347900 2015 ntTSL 1 (best) BASIC22.14■■□□□ 1.14
NUCKS1Q9H1E3 USP39-204ENST00000409766 2033 ntTSL 2 BASIC22.14■■□□□ 1.14
NUCKS1Q9H1E3 GPR162-203ENST00000428545 1610 ntTSL 1 (best) BASIC22.14■■□□□ 1.14
NUCKS1Q9H1E3 HAUS4-205ENST00000541587 1637 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.14
NUCKS1Q9H1E3 INPP1-202ENST00000392329 2162 ntAPPRIS P1 TSL 5 BASIC22.14■■□□□ 1.13
NUCKS1Q9H1E3 ACHE-207ENST00000428317 2159 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
NUCKS1Q9H1E3 KREMEN2-202ENST00000319500 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC22.14■■□□□ 1.13
NUCKS1Q9H1E3 AC010141.2-201ENST00000452426 721 ntBASIC22.14■■□□□ 1.13
NUCKS1Q9H1E3 NEU4-203ENST00000404257 2352 ntTSL 1 (best) BASIC22.14■■□□□ 1.13
NUCKS1Q9H1E3 SNX21-201ENST00000342644 1506 ntTSL 1 (best) BASIC22.14■■□□□ 1.13
NUCKS1Q9H1E3 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC22.14■■□□□ 1.13
NUCKS1Q9H1E3 ADRA1B-201ENST00000306675 2047 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
NUCKS1Q9H1E3 PCBP4-212ENST00000484633 2009 ntTSL 5 BASIC22.14■■□□□ 1.13
NUCKS1Q9H1E3 SPR-201ENST00000234454 1480 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
NUCKS1Q9H1E3 SENP5-204ENST00000445299 2491 ntTSL 2 BASIC22.14■■□□□ 1.13
NUCKS1Q9H1E3 SPI1-202ENST00000378538 1403 ntAPPRIS P3 TSL 1 (best) BASIC22.14■■□□□ 1.13
NUCKS1Q9H1E3 ZBTB42-202ENST00000555360 1411 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
NUCKS1Q9H1E3 CHRDL2-210ENST00000622063 1691 ntTSL 5 BASIC22.14■■□□□ 1.13
NUCKS1Q9H1E3 BAG4-202ENST00000432471 1943 ntTSL 1 (best) BASIC22.14■■□□□ 1.13
NUCKS1Q9H1E3 FGFR1-214ENST00000447712 5900 ntAPPRIS P3 TSL 1 (best) BASIC22.13■■□□□ 1.13
NUCKS1Q9H1E3 CERKL-204ENST00000374970 1392 ntTSL 1 (best) BASIC22.13■■□□□ 1.13
NUCKS1Q9H1E3 NTN5-201ENST00000270235 1836 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
NUCKS1Q9H1E3 CTNND2-201ENST00000304623 5481 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
NUCKS1Q9H1E3 TSC22D3-205ENST00000372390 1812 ntTSL 1 (best) BASIC22.13■■□□□ 1.13
NUCKS1Q9H1E3 UBE2K-201ENST00000261427 5245 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
NUCKS1Q9H1E3 NXN-201ENST00000336868 3036 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
NUCKS1Q9H1E3 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC22.13■■□□□ 1.13
NUCKS1Q9H1E3 MRFAP1-201ENST00000320912 2049 ntAPPRIS P1 TSL 2 BASIC22.13■■□□□ 1.13
NUCKS1Q9H1E3 MEF2A-202ENST00000354410 5824 ntAPPRIS P3 TSL 1 (best) BASIC22.13■■□□□ 1.13
NUCKS1Q9H1E3 BRSK2-201ENST00000308219 4089 ntAPPRIS P3 TSL 1 (best) BASIC22.13■■□□□ 1.13
NUCKS1Q9H1E3 SLC39A5-209ENST00000454355 1968 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
NUCKS1Q9H1E3 AC092468.1-201ENST00000491321 562 ntTSL 4 BASIC22.13■■□□□ 1.13
NUCKS1Q9H1E3 AC012414.4-201ENST00000560839 1074 ntTSL 5 BASIC22.13■■□□□ 1.13
NUCKS1Q9H1E3 AC060814.5-201ENST00000630916 1074 ntTSL 2 BASIC22.13■■□□□ 1.13
NUCKS1Q9H1E3 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC22.13■■□□□ 1.13
NUCKS1Q9H1E3 TAF4-201ENST00000252996 4628 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
NUCKS1Q9H1E3 SIMC1-203ENST00000429602 2694 ntAPPRIS ALT2 TSL 1 (best) BASIC22.13■■□□□ 1.13
NUCKS1Q9H1E3 ZNF510-203ENST00000375231 5616 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
NUCKS1Q9H1E3 AP000547.3-201ENST00000592918 1576 ntTSL 1 (best) BASIC22.12■■□□□ 1.13
NUCKS1Q9H1E3 UAP1-201ENST00000271469 2377 ntAPPRIS ALT1 TSL 5 BASIC22.12■■□□□ 1.13
NUCKS1Q9H1E3 CYB561D2-205ENST00000425346 1319 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
NUCKS1Q9H1E3 MGAT1-204ENST00000427865 1919 ntAPPRIS P1 TSL 2 BASIC22.12■■□□□ 1.13
NUCKS1Q9H1E3 GLI3-203ENST00000437480 451 ntTSL 2 BASIC22.12■■□□□ 1.13
NUCKS1Q9H1E3 AC093833.1-201ENST00000442821 553 ntTSL 5 BASIC22.12■■□□□ 1.13
NUCKS1Q9H1E3 FAXDC2-211ENST00000520968 558 ntTSL 4 BASIC22.12■■□□□ 1.13
NUCKS1Q9H1E3 IGFLR1-201ENST00000246532 1645 ntAPPRIS P2 TSL 1 (best) BASIC22.12■■□□□ 1.13
NUCKS1Q9H1E3 ENTPD5-206ENST00000556242 1437 ntTSL 5 BASIC22.12■■□□□ 1.13
NUCKS1Q9H1E3 CRHR1-214ENST00000619154 2370 ntTSL 1 (best) BASIC22.12■■□□□ 1.13
NUCKS1Q9H1E3 MAPT-210ENST00000535772 5718 ntTSL 5 BASIC22.12■■□□□ 1.13
NUCKS1Q9H1E3 AC116050.2-201ENST00000612102 1779 ntBASIC22.12■■□□□ 1.13
NUCKS1Q9H1E3 POLD2-201ENST00000223361 1597 ntTSL 5 BASIC22.12■■□□□ 1.13
NUCKS1Q9H1E3 IDH1-205ENST00000446179 2298 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
NUCKS1Q9H1E3 EEF1A2-202ENST00000298049 1748 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
NUCKS1Q9H1E3 DPP10-203ENST00000393147 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC22.11■■□□□ 1.13
NUCKS1Q9H1E3 ANTXR2-202ENST00000346652 1343 ntTSL 1 (best) BASIC22.11■■□□□ 1.13
NUCKS1Q9H1E3 GORAB-201ENST00000367762 1699 ntTSL 1 (best) BASIC22.11■■□□□ 1.13
NUCKS1Q9H1E3 ZNF511-201ENST00000359035 2004 ntTSL 2 BASIC22.11■■□□□ 1.13
NUCKS1Q9H1E3 ABHD12B-202ENST00000353130 1477 ntAPPRIS P3 TSL 1 (best) BASIC22.11■■□□□ 1.13
NUCKS1Q9H1E3 ASB16-201ENST00000293414 2139 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
NUCKS1Q9H1E3 AP002748.1-201ENST00000504911 580 ntTSL 3 BASIC22.11■■□□□ 1.13
NUCKS1Q9H1E3 AC022517.1-201ENST00000592429 346 ntBASIC22.11■■□□□ 1.13
Retrieved 100 of 98,524 protein–RNA pairs in 18.7 ms