Protein–RNA interactions for Protein: Q9C0C6

CIPC, CLOCK-interacting pacemaker, humanhuman

Predictions only

Length 399 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CIPCQ9C0C6 MTCL1-201ENST00000306329 5718 ntAPPRIS ALT2 TSL 5 BASIC20.96■□□□□ 0.95
CIPCQ9C0C6 EXTL3-213ENST00000523149 1779 ntTSL 5 BASIC20.96■□□□□ 0.95
CIPCQ9C0C6 AC007285.1-201ENST00000422239 893 ntTSL 5 BASIC20.96■□□□□ 0.95
CIPCQ9C0C6 ZNRF2P2-202ENST00000442865 590 ntTSL 4 BASIC20.96■□□□□ 0.95
CIPCQ9C0C6 HES2-205ENST00000487437 968 ntTSL 3 BASIC20.96■□□□□ 0.95
CIPCQ9C0C6 CHEK2P2-202ENST00000555186 864 ntTSL 2 BASIC20.96■□□□□ 0.95
CIPCQ9C0C6 TMPRSS5-202ENST00000536856 1811 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
CIPCQ9C0C6 FBXO27-202ENST00000509137 2130 ntAPPRIS P2 TSL 1 (best) BASIC20.96■□□□□ 0.95
CIPCQ9C0C6 Z98882.1-201ENST00000622160 2253 ntBASIC20.95■□□□□ 0.95
CIPCQ9C0C6 CXorf40A-204ENST00000423421 1403 ntAPPRIS P3 TSL 1 (best) BASIC20.95■□□□□ 0.95
CIPCQ9C0C6 BARHL1-201ENST00000263610 2341 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
CIPCQ9C0C6 LEF1-203ENST00000438313 1488 ntAPPRIS ALT1 TSL 1 (best) BASIC20.95■□□□□ 0.94
CIPCQ9C0C6 C8orf82-201ENST00000313465 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
CIPCQ9C0C6 CLDND1-201ENST00000341181 2161 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
CIPCQ9C0C6 POMGNT2-201ENST00000344697 2544 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
CIPCQ9C0C6 STPG4-207ENST00000445927 891 ntAPPRIS P1 TSL 5 BASIC20.95■□□□□ 0.94
CIPCQ9C0C6 ABCC3-217ENST00000515707 656 ntTSL 3 BASIC20.95■□□□□ 0.94
CIPCQ9C0C6 MMAB-206ENST00000540016 945 ntTSL 3 BASIC20.95■□□□□ 0.94
CIPCQ9C0C6 ASGR1-204ENST00000572879 797 ntTSL 5 BASIC20.95■□□□□ 0.94
CIPCQ9C0C6 AC008687.6-201ENST00000596318 630 ntBASIC20.95■□□□□ 0.94
CIPCQ9C0C6 USP25-202ENST00000285681 5216 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
CIPCQ9C0C6 KLHL17-205ENST00000622660 1950 ntTSL 5 BASIC20.95■□□□□ 0.94
CIPCQ9C0C6 AC026310.3-201ENST00000625186 2373 ntBASIC20.95■□□□□ 0.94
CIPCQ9C0C6 IQSEC3-201ENST00000382841 2701 ntAPPRIS P3 TSL 2 BASIC20.95■□□□□ 0.94
CIPCQ9C0C6 CECR2-202ENST00000342247 6178 ntAPPRIS ALT2 TSL 5 BASIC20.95■□□□□ 0.94
CIPCQ9C0C6 CTDP1-208ENST00000613122 5866 ntAPPRIS P3 TSL 1 (best) BASIC20.95■□□□□ 0.94
CIPCQ9C0C6 GPR27-201ENST00000304411 2447 ntAPPRIS P1 BASIC20.95■□□□□ 0.94
CIPCQ9C0C6 DUSP9-201ENST00000342782 2433 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
CIPCQ9C0C6 PAX1-202ENST00000444366 1850 ntAPPRIS ALT2 TSL 2 BASIC20.94■□□□□ 0.94
CIPCQ9C0C6 DACT1-204ENST00000541264 2610 ntAPPRIS ALT2 TSL 2 BASIC20.94■□□□□ 0.94
CIPCQ9C0C6 TBC1D12-201ENST00000225235 5272 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
CIPCQ9C0C6 MADCAM1-201ENST00000215637 1572 ntAPPRIS P4 TSL 1 (best) BASIC20.94■□□□□ 0.94
CIPCQ9C0C6 CCDC189-206ENST00000543610 1967 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
CIPCQ9C0C6 RUNDC3B-207ENST00000493037 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
CIPCQ9C0C6 PDXDC1-205ENST00000535621 2048 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
CIPCQ9C0C6 EXOC3-AS1-202ENST00000623673 1663 ntBASIC20.94■□□□□ 0.94
CIPCQ9C0C6 C10orf91-201ENST00000321248 1257 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
CIPCQ9C0C6 SLC47A1P1-201ENST00000420951 500 ntTSL 5 BASIC20.94■□□□□ 0.94
CIPCQ9C0C6 ADM-205ENST00000528544 586 ntTSL 2 BASIC20.94■□□□□ 0.94
CIPCQ9C0C6 UNC93B5-201ENST00000530315 699 ntBASIC20.94■□□□□ 0.94
CIPCQ9C0C6 CKLF-CMTM1-204ENST00000532838 587 ntAPPRIS ALT2 TSL 4 BASIC20.94■□□□□ 0.94
CIPCQ9C0C6 IRX5-204ENST00000560154 879 ntTSL 5 BASIC20.94■□□□□ 0.94
CIPCQ9C0C6 C19orf25-213ENST00000592872 1287 ntAPPRIS P1 TSL 2 BASIC20.94■□□□□ 0.94
CIPCQ9C0C6 AC006058.3-201ENST00000606217 1069 ntBASIC20.94■□□□□ 0.94
CIPCQ9C0C6 IRX5-205ENST00000620085 881 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
CIPCQ9C0C6 AC105020.6-201ENST00000621523 1217 ntBASIC20.94■□□□□ 0.94
CIPCQ9C0C6 KATNAL2-208ENST00000592005 1348 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
CIPCQ9C0C6 ILDR2-204ENST00000525740 2242 ntTSL 5 BASIC20.94■□□□□ 0.94
CIPCQ9C0C6 MOGS-202ENST00000409065 2668 ntTSL 5 BASIC20.94■□□□□ 0.94
CIPCQ9C0C6 MAMSTR-202ENST00000356751 1825 ntTSL 2 BASIC20.94■□□□□ 0.94
CIPCQ9C0C6 IKBIP-203ENST00000393042 1368 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
CIPCQ9C0C6 SPHK2-213ENST00000601712 1394 ntAPPRIS ALT2 TSL 5 BASIC20.94■□□□□ 0.94
CIPCQ9C0C6 MEF2B-203ENST00000410050 1429 ntTSL 5 BASIC20.94■□□□□ 0.94
CIPCQ9C0C6 AC008687.4-201ENST00000637680 1485 ntAPPRIS P1 TSL 5 BASIC20.94■□□□□ 0.94
CIPCQ9C0C6 NR5A1-204ENST00000620110 2975 ntTSL 5 BASIC20.94■□□□□ 0.94
CIPCQ9C0C6 FNDC10-201ENST00000422725 2085 ntAPPRIS P1 BASIC20.93■□□□□ 0.94
CIPCQ9C0C6 TRIM3-214ENST00000536344 2704 ntTSL 2 BASIC20.93■□□□□ 0.94
CIPCQ9C0C6 RANBP10-202ENST00000448631 2232 ntTSL 2 BASIC20.93■□□□□ 0.94
CIPCQ9C0C6 TMEM178A-201ENST00000281961 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
CIPCQ9C0C6 FAM3A-202ENST00000359889 1712 ntAPPRIS P1 TSL 2 BASIC20.93■□□□□ 0.94
CIPCQ9C0C6 ERLEC1-203ENST00000405123 1756 ntTSL 5 BASIC20.93■□□□□ 0.94
CIPCQ9C0C6 PPP1R12B-212ENST00000480184 1808 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
CIPCQ9C0C6 PRORSD1P-201ENST00000295112 541 ntBASIC20.93■□□□□ 0.94
CIPCQ9C0C6 MFF-205ENST00000354503 1085 ntTSL 2 BASIC20.93■□□□□ 0.94
CIPCQ9C0C6 AC073896.1-201ENST00000549318 937 ntAPPRIS P1 TSL 5 BASIC20.93■□□□□ 0.94
CIPCQ9C0C6 AL356020.1-201ENST00000554235 1076 ntTSL 5 BASIC20.93■□□□□ 0.94
CIPCQ9C0C6 PRORSD1P-203ENST00000579162 626 ntTSL 5 BASIC20.93■□□□□ 0.94
CIPCQ9C0C6 MAGIX-206ENST00000615626 1057 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
CIPCQ9C0C6 HLA-B-256ENST00000639848 1089 ntBASIC20.93■□□□□ 0.94
CIPCQ9C0C6 AC066615.1-201ENST00000640911 628 ntBASIC20.93■□□□□ 0.94
CIPCQ9C0C6 SHISA4-201ENST00000362011 1341 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
CIPCQ9C0C6 ACY1-207ENST00000476854 1319 ntTSL 3 BASIC20.93■□□□□ 0.94
CIPCQ9C0C6 DPYS-201ENST00000351513 2127 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
CIPCQ9C0C6 TERF2-201ENST00000254942 2983 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
CIPCQ9C0C6 FBXO6-201ENST00000376753 1520 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
CIPCQ9C0C6 BCL11B-203ENST00000443726 2599 ntAPPRIS ALT2 TSL 5 BASIC20.92■□□□□ 0.94
CIPCQ9C0C6 ARHGAP8-204ENST00000389774 1725 ntAPPRIS ALT2 TSL 2 BASIC20.92■□□□□ 0.94
CIPCQ9C0C6 TMEM17-201ENST00000335390 1797 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
CIPCQ9C0C6 GPC1-202ENST00000420138 1835 ntTSL 5 BASIC20.92■□□□□ 0.94
CIPCQ9C0C6 FAM83D-202ENST00000619850 2361 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
CIPCQ9C0C6 IFI27L2-201ENST00000238609 511 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
CIPCQ9C0C6 TRA2B-203ENST00000382191 976 ntTSL 2 BASIC20.92■□□□□ 0.94
CIPCQ9C0C6 CCDC74B-203ENST00000409128 789 ntAPPRIS ALT2 TSL 2 BASIC20.92■□□□□ 0.94
CIPCQ9C0C6 AP003097.1-201ENST00000530657 1135 ntBASIC20.92■□□□□ 0.94
CIPCQ9C0C6 SPI1-204ENST00000533968 1290 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
CIPCQ9C0C6 AC060766.5-201ENST00000590539 871 ntBASIC20.92■□□□□ 0.94
CIPCQ9C0C6 NXN-202ENST00000537628 1340 ntTSL 3 BASIC20.92■□□□□ 0.94
CIPCQ9C0C6 DTD1-201ENST00000377452 1387 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
CIPCQ9C0C6 DENND4B-201ENST00000361217 5706 ntAPPRIS P2 TSL 1 (best) BASIC20.92■□□□□ 0.94
CIPCQ9C0C6 ZNF534-201ENST00000301085 1525 ntTSL 2 BASIC20.92■□□□□ 0.94
CIPCQ9C0C6 BICRA-204ENST00000614245 5697 ntAPPRIS ALT2 TSL 5 BASIC20.91■□□□□ 0.94
CIPCQ9C0C6 FGFR1-241ENST00000619564 5482 ntTSL 5 BASIC20.91■□□□□ 0.94
CIPCQ9C0C6 PRTN3-201ENST00000234347 1026 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
CIPCQ9C0C6 GPR108-201ENST00000264080 2057 ntAPPRIS P2 TSL 1 (best) BASIC20.91■□□□□ 0.94
CIPCQ9C0C6 PDE5A-201ENST00000264805 3020 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
CIPCQ9C0C6 MRAP-201ENST00000303645 935 ntAPPRIS P4 TSL 1 (best) BASIC20.91■□□□□ 0.94
CIPCQ9C0C6 ST3GAL3-207ENST00000353126 1969 ntTSL 5 BASIC20.91■□□□□ 0.94
CIPCQ9C0C6 BAALC-205ENST00000438105 2662 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
CIPCQ9C0C6 AC026366.1-201ENST00000488803 879 ntBASIC20.91■□□□□ 0.94
CIPCQ9C0C6 FUZ-216ENST00000533418 1524 ntTSL 5 BASIC20.91■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 30.5 ms