Protein–RNA interactions for Protein: Q9BSR8

YIPF4, Protein YIPF4, humanhuman

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
YIPF4Q9BSR8 TMEM163-201ENST00000281924 1892 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
YIPF4Q9BSR8 NFYC-204ENST00000372653 1862 ntTSL 2 BASIC19.22■□□□□ 0.67
YIPF4Q9BSR8 RELT-202ENST00000393580 2669 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
YIPF4Q9BSR8 RASGRP1-201ENST00000310803 5023 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
YIPF4Q9BSR8 RASGRP1-204ENST00000539159 5021 ntAPPRIS ALT1 TSL 5 BASIC19.22■□□□□ 0.67
YIPF4Q9BSR8 NEK3-208ENST00000618534 2414 ntAPPRIS P2 TSL 5 BASIC19.22■□□□□ 0.67
YIPF4Q9BSR8 RAB11FIP4-211ENST00000621161 8628 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
YIPF4Q9BSR8 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
YIPF4Q9BSR8 HENMT1-203ENST00000402983 1696 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
YIPF4Q9BSR8 NFKBIB-201ENST00000313582 1159 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
YIPF4Q9BSR8 PTRH1-201ENST00000335223 759 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
YIPF4Q9BSR8 IL15RA-201ENST00000379971 588 ntTSL 3 BASIC19.22■□□□□ 0.67
YIPF4Q9BSR8 DLX3-202ENST00000512495 834 ntTSL 2 BASIC19.22■□□□□ 0.67
YIPF4Q9BSR8 AC068385.1-201ENST00000533218 409 ntTSL 3 BASIC19.22■□□□□ 0.67
YIPF4Q9BSR8 AP005205.2-201ENST00000577327 491 ntTSL 2 BASIC19.22■□□□□ 0.67
YIPF4Q9BSR8 RLBP1-201ENST00000268125 1810 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
YIPF4Q9BSR8 ENTPD5-206ENST00000556242 1437 ntTSL 5 BASIC19.22■□□□□ 0.67
YIPF4Q9BSR8 BCR-202ENST00000359540 4708 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
YIPF4Q9BSR8 DMRTA2-202ENST00000418121 2840 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
YIPF4Q9BSR8 PRMT5-201ENST00000216350 2271 ntTSL 2 BASIC19.22■□□□□ 0.67
YIPF4Q9BSR8 KCNK17-202ENST00000453413 1706 ntAPPRIS ALT2 TSL 5 BASIC19.22■□□□□ 0.67
YIPF4Q9BSR8 BID-203ENST00000399765 1879 ntTSL 2 BASIC19.22■□□□□ 0.67
YIPF4Q9BSR8 CLDND1-201ENST00000341181 2161 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
YIPF4Q9BSR8 BORCS8-MEF2B-202ENST00000444486 1492 ntAPPRIS P2 TSL 2 BASIC19.22■□□□□ 0.67
YIPF4Q9BSR8 KREMEN2-201ENST00000303746 2326 ntAPPRIS P4 TSL 1 (best) BASIC19.22■□□□□ 0.67
YIPF4Q9BSR8 ARRB2-202ENST00000346341 1769 ntTSL 2 BASIC19.21■□□□□ 0.67
YIPF4Q9BSR8 SLC16A3-201ENST00000392339 2074 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
YIPF4Q9BSR8 SLC16A3-202ENST00000392341 2086 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
YIPF4Q9BSR8 MEDAG-201ENST00000380482 2374 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
YIPF4Q9BSR8 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC19.21■□□□□ 0.67
YIPF4Q9BSR8 SLC35A3-205ENST00000465289 5696 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
YIPF4Q9BSR8 LZTS3-201ENST00000329152 5257 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
YIPF4Q9BSR8 HCFC1R1-201ENST00000248089 965 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
YIPF4Q9BSR8 MPRIP-203ENST00000395806 527 ntTSL 3 BASIC19.21■□□□□ 0.67
YIPF4Q9BSR8 INTS11-205ENST00000429572 1104 ntTSL 2 BASIC19.21■□□□□ 0.67
YIPF4Q9BSR8 AC104986.2-201ENST00000521696 380 ntTSL 2 BASIC19.21■□□□□ 0.67
YIPF4Q9BSR8 AC140479.5-201ENST00000568189 735 ntTSL 3 BASIC19.21■□□□□ 0.67
YIPF4Q9BSR8 HCFC1R1-207ENST00000574980 845 ntTSL 5 BASIC19.21■□□□□ 0.67
YIPF4Q9BSR8 FAM129C-212ENST00000601861 2180 ntAPPRIS ALT2 TSL 2 BASIC19.21■□□□□ 0.67
YIPF4Q9BSR8 ABHD1-207ENST00000621324 1078 ntTSL 5 BASIC19.21■□□□□ 0.67
YIPF4Q9BSR8 KCNMA1-252ENST00000639120 2308 ntTSL 5 BASIC19.21■□□□□ 0.67
YIPF4Q9BSR8 RHOBTB3-201ENST00000379982 5537 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
YIPF4Q9BSR8 MARCH9-201ENST00000266643 2982 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
YIPF4Q9BSR8 SNUPN-205ENST00000564644 1931 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.67
YIPF4Q9BSR8 KCNK6-201ENST00000263372 5722 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
YIPF4Q9BSR8 TAF6L-201ENST00000294168 2116 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
YIPF4Q9BSR8 TREX2-202ENST00000334497 1982 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
YIPF4Q9BSR8 ATG4B-204ENST00000402096 1685 ntTSL 2 BASIC19.2■□□□□ 0.66
YIPF4Q9BSR8 TMEM121-201ENST00000392519 1532 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
YIPF4Q9BSR8 C7orf26-201ENST00000344417 2182 ntAPPRIS P1 TSL 2 BASIC19.2■□□□□ 0.66
YIPF4Q9BSR8 CYP1B1-207ENST00000614273 2174 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
YIPF4Q9BSR8 FAM129C-203ENST00000449408 2004 ntAPPRIS ALT2 TSL 2 BASIC19.2■□□□□ 0.66
YIPF4Q9BSR8 PMS1-222ENST00000639501 2506 ntTSL 5 BASIC19.2■□□□□ 0.66
YIPF4Q9BSR8 RARA-201ENST00000254066 2414 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
YIPF4Q9BSR8 RBM17P2-201ENST00000616397 1405 ntBASIC19.2■□□□□ 0.66
YIPF4Q9BSR8 PARP1-202ENST00000366792 553 ntTSL 3 BASIC19.2■□□□□ 0.66
YIPF4Q9BSR8 PTPA-214ENST00000423100 988 ntTSL 2 BASIC19.2■□□□□ 0.66
YIPF4Q9BSR8 CDKN2A-205ENST00000479692 544 ntTSL 5 BASIC19.2■□□□□ 0.66
YIPF4Q9BSR8 DM1-AS-203ENST00000590076 730 ntTSL 4 BASIC19.2■□□□□ 0.66
YIPF4Q9BSR8 AP005212.1-201ENST00000581547 1997 ntBASIC19.2■□□□□ 0.66
YIPF4Q9BSR8 NUF2-208ENST00000524800 1845 ntTSL 5 BASIC19.2■□□□□ 0.66
YIPF4Q9BSR8 IRX4-208ENST00000622814 2398 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
YIPF4Q9BSR8 SHISA4-201ENST00000362011 1341 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
YIPF4Q9BSR8 PLEKHB1-204ENST00000398494 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC19.2■□□□□ 0.66
YIPF4Q9BSR8 PAGR1-201ENST00000320330 1702 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
YIPF4Q9BSR8 OTUB1-209ENST00000538426 1729 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
YIPF4Q9BSR8 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC19.2■□□□□ 0.66
YIPF4Q9BSR8 AC116050.2-201ENST00000612102 1779 ntBASIC19.19■□□□□ 0.66
YIPF4Q9BSR8 UBTD2-201ENST00000393792 3301 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
YIPF4Q9BSR8 SLC38A7-205ENST00000564010 1437 ntTSL 2 BASIC19.19■□□□□ 0.66
YIPF4Q9BSR8 AL391422.3-201ENST00000603791 2761 ntBASIC19.19■□□□□ 0.66
YIPF4Q9BSR8 LYRM9-201ENST00000379102 501 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
YIPF4Q9BSR8 LYRM9-206ENST00000508862 807 ntTSL 3 BASIC19.19■□□□□ 0.66
YIPF4Q9BSR8 DBI-210ENST00000542275 757 ntTSL 5 BASIC19.19■□□□□ 0.66
YIPF4Q9BSR8 SNAP23-214ENST00000567094 834 ntTSL 3 BASIC19.19■□□□□ 0.66
YIPF4Q9BSR8 OSCAR-208ENST00000611261 2061 ntAPPRIS P4 TSL 5 BASIC19.19■□□□□ 0.66
YIPF4Q9BSR8 TDRD10-202ENST00000368482 2331 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
YIPF4Q9BSR8 GLIPR2-203ENST00000396613 1917 ntTSL 4 BASIC19.19■□□□□ 0.66
YIPF4Q9BSR8 DUSP15-201ENST00000278979 1732 ntTSL 2 BASIC19.19■□□□□ 0.66
YIPF4Q9BSR8 LMO4-202ENST00000370544 5405 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
YIPF4Q9BSR8 MAML1-201ENST00000292599 5723 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
YIPF4Q9BSR8 ADGRA2-201ENST00000315215 6270 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
YIPF4Q9BSR8 NF2-201ENST00000334961 2020 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
YIPF4Q9BSR8 ALG1-202ENST00000544428 1419 ntTSL 2 BASIC19.18■□□□□ 0.66
YIPF4Q9BSR8 SMIM11B-205ENST00000624304 1863 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
YIPF4Q9BSR8 FBXL15-202ENST00000369956 2344 ntAPPRIS ALT1 TSL 1 (best) BASIC19.18■□□□□ 0.66
YIPF4Q9BSR8 SUMF2-204ENST00000395436 1683 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
YIPF4Q9BSR8 CRHR1-214ENST00000619154 2370 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
YIPF4Q9BSR8 HCG18-235ENST00000426882 4862 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
YIPF4Q9BSR8 FGFR3-210ENST00000613647 4438 ntTSL 5 BASIC19.18■□□□□ 0.66
YIPF4Q9BSR8 SOCS1-201ENST00000332029 1225 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
YIPF4Q9BSR8 ATPIF1-203ENST00000468425 539 ntTSL 2 BASIC19.18■□□□□ 0.66
YIPF4Q9BSR8 LINC02199-202ENST00000510067 1008 ntTSL 2 BASIC19.18■□□□□ 0.66
YIPF4Q9BSR8 RAP1B-220ENST00000539091 977 ntTSL 2 BASIC19.18■□□□□ 0.66
YIPF4Q9BSR8 COX4I1-216ENST00000568794 794 ntTSL 5 BASIC19.18■□□□□ 0.66
YIPF4Q9BSR8 AC007773.1-201ENST00000592680 972 ntTSL 2 BASIC19.18■□□□□ 0.66
YIPF4Q9BSR8 AL136982.7-201ENST00000609363 465 ntTSL 4 BASIC19.18■□□□□ 0.66
YIPF4Q9BSR8 MYCNOS-205ENST00000641950 531 ntBASIC19.18■□□□□ 0.66
YIPF4Q9BSR8 C22orf39-206ENST00000611555 1977 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
YIPF4Q9BSR8 BZW1-202ENST00000409226 2455 ntTSL 2 BASIC19.18■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 36.5 ms