Protein–RNA interactions for Protein: Q9BQW3

EBF4, Transcription factor COE4, humanhuman

Predictions only

Length 602 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EBF4Q9BQW3 ULK2-202ENST00000395544 6010 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
EBF4Q9BQW3 RNF8-204ENST00000469731 1800 ntTSL 5 BASIC19.93■□□□□ 0.78
EBF4Q9BQW3 CERS4-208ENST00000559336 1515 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
EBF4Q9BQW3 AP000547.3-201ENST00000592918 1576 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
EBF4Q9BQW3 REPS1-203ENST00000409812 2511 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
EBF4Q9BQW3 SSPN-204ENST00000535504 419 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
EBF4Q9BQW3 CERS5-203ENST00000422340 2855 ntAPPRIS ALT2 TSL 2 BASIC19.93■□□□□ 0.78
EBF4Q9BQW3 BEST2-201ENST00000042931 1908 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
EBF4Q9BQW3 TREX2-202ENST00000334497 1982 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
EBF4Q9BQW3 PCDHB11-202ENST00000624887 1973 ntTSL 2 BASIC19.93■□□□□ 0.78
EBF4Q9BQW3 ZNF554-201ENST00000317243 2736 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
EBF4Q9BQW3 MTMR14-201ENST00000296003 2494 ntAPPRIS P4 TSL 1 (best) BASIC19.93■□□□□ 0.78
EBF4Q9BQW3 SNAP91-211ENST00000520213 2168 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
EBF4Q9BQW3 NFE2L1-204ENST00000536222 2172 ntTSL 2 BASIC19.93■□□□□ 0.78
EBF4Q9BQW3 WASH6P-203ENST00000460206 1826 ntTSL 5 BASIC19.92■□□□□ 0.78
EBF4Q9BQW3 AGPAT5-201ENST00000285518 3685 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
EBF4Q9BQW3 FXR2-201ENST00000250113 2957 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
EBF4Q9BQW3 PPM1B-201ENST00000282412 2606 ntAPPRIS P4 TSL 1 (best) BASIC19.92■□□□□ 0.78
EBF4Q9BQW3 C1QTNF1-201ENST00000311661 2624 ntTSL 2 BASIC19.92■□□□□ 0.78
EBF4Q9BQW3 LINC00482-201ENST00000332012 2023 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
EBF4Q9BQW3 DALRD3-205ENST00000440857 2014 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
EBF4Q9BQW3 LINC01558-202ENST00000495520 1652 ntTSL 2 BASIC19.92■□□□□ 0.78
EBF4Q9BQW3 ORMDL1-202ENST00000392349 1137 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
EBF4Q9BQW3 IGHV3-19-201ENST00000521488 291 ntBASIC19.92■□□□□ 0.78
EBF4Q9BQW3 TGFBR3L-202ENST00000565886 1260 ntAPPRIS P1 TSL 5 BASIC19.92■□□□□ 0.78
EBF4Q9BQW3 MCRIP1-205ENST00000572645 1038 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
EBF4Q9BQW3 AC012313.1-203ENST00000597980 570 ntTSL 4 BASIC19.92■□□□□ 0.78
EBF4Q9BQW3 CBWD3-212ENST00000616550 721 ntTSL 2 BASIC19.92■□□□□ 0.78
EBF4Q9BQW3 CBWD6-216ENST00000617933 721 ntTSL 3 BASIC19.92■□□□□ 0.78
EBF4Q9BQW3 KCNA3-201ENST00000369769 2569 ntAPPRIS P1 BASIC19.92■□□□□ 0.78
EBF4Q9BQW3 WNT7B-204ENST00000410089 2202 ntTSL 5 BASIC19.92■□□□□ 0.78
EBF4Q9BQW3 MGAT5B-201ENST00000301618 4486 ntAPPRIS P3 TSL 5 BASIC19.92■□□□□ 0.78
EBF4Q9BQW3 CD82-201ENST00000227155 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
EBF4Q9BQW3 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
EBF4Q9BQW3 HMCES-203ENST00000417226 1490 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
EBF4Q9BQW3 FXYD3-203ENST00000435734 1467 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
EBF4Q9BQW3 AP004607.4-201ENST00000530158 1459 ntBASIC19.92■□□□□ 0.78
EBF4Q9BQW3 GAS6-201ENST00000327773 2490 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
EBF4Q9BQW3 DMWD-201ENST00000270223 3305 ntAPPRIS P2 TSL 1 (best) BASIC19.91■□□□□ 0.78
EBF4Q9BQW3 P3H4-201ENST00000355468 2791 ntAPPRIS P2 TSL 2 BASIC19.91■□□□□ 0.78
EBF4Q9BQW3 GORAB-201ENST00000367762 1699 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
EBF4Q9BQW3 SSTR3-202ENST00000617123 1781 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
EBF4Q9BQW3 LYSMD4-210ENST00000545021 2431 ntTSL 4 BASIC19.91■□□□□ 0.78
EBF4Q9BQW3 CLN8-208ENST00000635751 1807 ntAPPRIS P1 TSL 5 BASIC19.91■□□□□ 0.78
EBF4Q9BQW3 C19orf60-201ENST00000358607 839 ntAPPRIS P3 TSL 1 (best) BASIC19.91■□□□□ 0.78
EBF4Q9BQW3 AL161908.1-203ENST00000425370 506 ntTSL 2 BASIC19.91■□□□□ 0.78
EBF4Q9BQW3 C19orf60-202ENST00000450195 702 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
EBF4Q9BQW3 EEF1DP3-203ENST00000566025 782 ntBASIC19.91■□□□□ 0.78
EBF4Q9BQW3 MIR4767-201ENST00000582827 78 ntBASIC19.91■□□□□ 0.78
EBF4Q9BQW3 RAB1A-202ENST00000409751 1333 ntTSL 5 BASIC19.91■□□□□ 0.78
EBF4Q9BQW3 TM7SF3-201ENST00000343028 2709 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
EBF4Q9BQW3 RUFY3-203ENST00000417478 2143 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
EBF4Q9BQW3 FOXL2-201ENST00000330315 2917 ntAPPRIS P1 BASIC19.91■□□□□ 0.78
EBF4Q9BQW3 PRR7-201ENST00000323249 1480 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
EBF4Q9BQW3 FGFR2-208ENST00000360144 3001 ntTSL 2 BASIC19.91■□□□□ 0.78
EBF4Q9BQW3 FPGS-203ENST00000373247 2279 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
EBF4Q9BQW3 DUX4-204ENST00000569241 1574 ntAPPRIS P2 TSL 1 (best) BASIC19.91■□□□□ 0.78
EBF4Q9BQW3 ARMC6-202ENST00000392335 2383 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
EBF4Q9BQW3 BX323043.1-201ENST00000641006 1765 ntBASIC19.9■□□□□ 0.78
EBF4Q9BQW3 CLDND1-201ENST00000341181 2161 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
EBF4Q9BQW3 UBXN11-201ENST00000314675 2254 ntAPPRIS ALT2 TSL 2 BASIC19.9■□□□□ 0.78
EBF4Q9BQW3 FDFT1-226ENST00000623368 2368 ntTSL 2 BASIC19.9■□□□□ 0.78
EBF4Q9BQW3 DNAJC4-202ENST00000321685 1288 ntAPPRIS P3 TSL 1 (best) BASIC19.9■□□□□ 0.78
EBF4Q9BQW3 KRTAP17-1-201ENST00000334202 779 ntAPPRIS P1 BASIC19.9■□□□□ 0.78
EBF4Q9BQW3 SRM-201ENST00000376957 1266 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
EBF4Q9BQW3 SUMF1-205ENST00000458465 1102 ntTSL 2 BASIC19.9■□□□□ 0.78
EBF4Q9BQW3 AC131281.2-201ENST00000520478 145 ntBASIC19.9■□□□□ 0.78
EBF4Q9BQW3 AC126544.1-201ENST00000580842 1059 ntBASIC19.9■□□□□ 0.78
EBF4Q9BQW3 AL445237.1-202ENST00000604581 425 ntTSL 5 BASIC19.9■□□□□ 0.78
EBF4Q9BQW3 AC233992.3-201ENST00000607491 485 ntBASIC19.9■□□□□ 0.78
EBF4Q9BQW3 PRMT1-221ENST00000610806 1192 ntTSL 3 BASIC19.9■□□□□ 0.78
EBF4Q9BQW3 DNAJC4-212ENST00000628077 938 ntTSL 5 BASIC19.9■□□□□ 0.78
EBF4Q9BQW3 DPF1-201ENST00000355526 1632 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
EBF4Q9BQW3 STRN4-202ENST00000391910 3628 ntAPPRIS ALT1 TSL 5 BASIC19.9■□□□□ 0.78
EBF4Q9BQW3 TSC22D3-205ENST00000372390 1812 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
EBF4Q9BQW3 DTX3-208ENST00000551632 1840 ntAPPRIS ALT1 TSL 2 BASIC19.9■□□□□ 0.78
EBF4Q9BQW3 AP000974.1-201ENST00000623909 2387 ntBASIC19.9■□□□□ 0.78
EBF4Q9BQW3 TIGD6-202ENST00000515406 2429 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
EBF4Q9BQW3 FBXO27-201ENST00000292853 2330 ntAPPRIS P2 TSL 1 (best) BASIC19.89■□□□□ 0.77
EBF4Q9BQW3 ENPP7-201ENST00000328313 2043 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
EBF4Q9BQW3 FLVCR1-201ENST00000366971 5939 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
EBF4Q9BQW3 ST3GAL5-202ENST00000377332 2165 ntTSL 5 BASIC19.89■□□□□ 0.77
EBF4Q9BQW3 HDDC3-202ENST00000394272 1880 ntAPPRIS P1 TSL 2 BASIC19.89■□□□□ 0.77
EBF4Q9BQW3 CLN3-207ENST00000395653 1430 ntTSL 5 BASIC19.89■□□□□ 0.77
EBF4Q9BQW3 UMOD-203ENST00000396138 2399 ntAPPRIS ALT2 TSL 5 BASIC19.89■□□□□ 0.77
EBF4Q9BQW3 RASSF7-204ENST00000431809 1745 ntAPPRIS ALT2 TSL 5 BASIC19.89■□□□□ 0.77
EBF4Q9BQW3 FAM239A-202ENST00000438107 2155 ntTSL 5 BASIC19.89■□□□□ 0.77
EBF4Q9BQW3 GSR-204ENST00000537535 1323 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
EBF4Q9BQW3 SAMD11-213ENST00000618181 2179 ntAPPRIS ALT2 TSL 5 BASIC19.89■□□□□ 0.77
EBF4Q9BQW3 MAP3K21-203ENST00000366624 5809 ntAPPRIS P2 TSL 1 (best) BASIC19.89■□□□□ 0.77
EBF4Q9BQW3 ARFRP1-208ENST00000612256 2974 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
EBF4Q9BQW3 ZNF707-202ENST00000418203 2661 ntAPPRIS P1 TSL 5 BASIC19.89■□□□□ 0.77
EBF4Q9BQW3 DHRS7-201ENST00000216500 2322 ntAPPRIS P1 TSL 5 BASIC19.88■□□□□ 0.77
EBF4Q9BQW3 TMEM198-202ENST00000373883 2218 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
EBF4Q9BQW3 RBM45-201ENST00000286070 1785 ntAPPRIS P2 TSL 1 (best) BASIC19.88■□□□□ 0.77
EBF4Q9BQW3 RNF224-201ENST00000445101 1798 ntAPPRIS P1 TSL 3 BASIC19.88■□□□□ 0.77
EBF4Q9BQW3 TRABD-204ENST00000395829 1628 ntAPPRIS ALT2 TSL 5 BASIC19.88■□□□□ 0.77
EBF4Q9BQW3 TTYH3-201ENST00000258796 4840 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
EBF4Q9BQW3 URAD-201ENST00000332715 931 ntAPPRIS P1 TSL 5 BASIC19.88■□□□□ 0.77
EBF4Q9BQW3 DCTN3-202ENST00000341694 899 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 20.3 ms