Protein–RNA interactions for Protein: Q9BQ65

USB1, U6 snRNA phosphodiesterase, humanhuman

Known RBP Predictions only

Length 265 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USB1Q9BQ65 AC092118.2-201ENST00000613495 667 ntBASIC18.18■□□□□ 0.5
USB1Q9BQ65 GAMT-205ENST00000640762 751 ntTSL 5 BASIC18.18■□□□□ 0.5
USB1Q9BQ65 LRCH4-209ENST00000497245 2014 ntTSL 5 BASIC18.18■□□□□ 0.5
USB1Q9BQ65 PSMD7-201ENST00000219313 1670 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
USB1Q9BQ65 KCNA2-206ENST00000638477 1524 ntTSL 5 BASIC18.18■□□□□ 0.5
USB1Q9BQ65 TM7SF2-201ENST00000279263 1722 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
USB1Q9BQ65 NR2F2-204ENST00000453270 1712 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
USB1Q9BQ65 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
USB1Q9BQ65 RWDD4-206ENST00000512740 1393 ntTSL 5 BASIC18.17■□□□□ 0.5
USB1Q9BQ65 EPHX3-202ENST00000435261 1771 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
USB1Q9BQ65 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC18.17■□□□□ 0.5
USB1Q9BQ65 DNLZ-202ENST00000371739 2934 ntTSL 5 BASIC18.17■□□□□ 0.5
USB1Q9BQ65 TFAP2A-202ENST00000379608 2576 ntAPPRIS ALT1 TSL 1 (best) BASIC18.17■□□□□ 0.5
USB1Q9BQ65 ADORA2A-AS1-203ENST00000427813 2027 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
USB1Q9BQ65 RPS6KL1-216ENST00000557413 2425 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
USB1Q9BQ65 OIP5-201ENST00000220514 1236 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
USB1Q9BQ65 NAA20-202ENST00000334982 1260 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
USB1Q9BQ65 C2orf82-203ENST00000409533 561 ntAPPRIS P2 TSL 4 BASIC18.17■□□□□ 0.5
USB1Q9BQ65 FTCDNL1-202ENST00000420128 1021 ntTSL 5 BASIC18.17■□□□□ 0.5
USB1Q9BQ65 AC091799.1-201ENST00000422823 811 ntBASIC18.17■□□□□ 0.5
USB1Q9BQ65 GDF6-203ENST00000621429 1179 ntTSL 5 BASIC18.17■□□□□ 0.5
USB1Q9BQ65 MOK-226ENST00000522874 1890 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
USB1Q9BQ65 ANKHD1-205ENST00000394723 2135 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
USB1Q9BQ65 ANKRD19P-205ENST00000473204 2370 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
USB1Q9BQ65 SNX24-211ENST00000513881 1563 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
USB1Q9BQ65 MAML1-201ENST00000292599 5723 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
USB1Q9BQ65 CD247-201ENST00000362089 1609 ntAPPRIS P4 TSL 1 (best) BASIC18.16■□□□□ 0.5
USB1Q9BQ65 MTAP-204ENST00000460874 1434 ntTSL 2 BASIC18.16■□□□□ 0.5
USB1Q9BQ65 PGRMC2-201ENST00000296425 2767 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
USB1Q9BQ65 TERF1-202ENST00000276603 1677 ntAPPRIS P4 TSL 1 (best) BASIC18.16■□□□□ 0.5
USB1Q9BQ65 AC133555.3-201ENST00000549950 1693 ntAPPRIS P5 TSL 5 BASIC18.16■□□□□ 0.5
USB1Q9BQ65 AC106782.1-201ENST00000550538 1693 ntAPPRIS P5 TSL 5 BASIC18.16■□□□□ 0.5
USB1Q9BQ65 MAPT-210ENST00000535772 5718 ntTSL 5 BASIC18.16■□□□□ 0.5
USB1Q9BQ65 C10orf55-202ENST00000412307 2360 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
USB1Q9BQ65 AC026471.6-201ENST00000622954 1905 ntBASIC18.16■□□□□ 0.5
USB1Q9BQ65 GNB2-206ENST00000424361 1478 ntTSL 5 BASIC18.16■□□□□ 0.5
USB1Q9BQ65 FAH-202ENST00000407106 2152 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
USB1Q9BQ65 HAND1-201ENST00000231121 1738 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
USB1Q9BQ65 LY6E-202ENST00000429120 1173 ntAPPRIS P2 TSL 1 (best) BASIC18.16■□□□□ 0.5
USB1Q9BQ65 MAGI2-AS3-209ENST00000448195 774 ntTSL 3 BASIC18.16■□□□□ 0.5
USB1Q9BQ65 CTBP1-AS2-203ENST00000507044 739 ntTSL 3 BASIC18.16■□□□□ 0.5
USB1Q9BQ65 DENND3-207ENST00000518347 850 ntTSL 2 BASIC18.16■□□□□ 0.5
USB1Q9BQ65 TPT1-AS1-210ENST00000520590 873 ntTSL 5 BASIC18.16■□□□□ 0.5
USB1Q9BQ65 PDXDC2P-202ENST00000527016 543 ntTSL 3 BASIC18.16■□□□□ 0.5
USB1Q9BQ65 TNNI3-207ENST00000588882 669 ntTSL 2 BASIC18.16■□□□□ 0.5
USB1Q9BQ65 PEX10-202ENST00000447513 1997 ntAPPRIS P2 TSL 1 (best) BASIC18.16■□□□□ 0.5
USB1Q9BQ65 ATP8A1-207ENST00000510289 2238 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
USB1Q9BQ65 C7orf25-201ENST00000350427 2451 ntAPPRIS P1 TSL 2 BASIC18.16■□□□□ 0.5
USB1Q9BQ65 TMEM44-204ENST00000392432 2490 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
USB1Q9BQ65 ZSWIM7-201ENST00000399277 2008 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
USB1Q9BQ65 C16orf58-209ENST00000567994 1845 ntTSL 5 BASIC18.16■□□□□ 0.5
USB1Q9BQ65 ARHGAP23-222ENST00000622683 5964 ntAPPRIS P2 TSL 5 BASIC18.16■□□□□ 0.5
USB1Q9BQ65 TMEM214-203ENST00000404032 2830 ntTSL 2 BASIC18.16■□□□□ 0.5
USB1Q9BQ65 CERS4-209ENST00000559450 1637 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
USB1Q9BQ65 TXNRD2-203ENST00000400519 3155 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
USB1Q9BQ65 HSD11B1L-218ENST00000581773 1687 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
USB1Q9BQ65 PXYLP1-203ENST00000502783 2066 ntTSL 2 BASIC18.15■□□□□ 0.5
USB1Q9BQ65 COA6-202ENST00000366613 641 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
USB1Q9BQ65 SMNDC1-201ENST00000369592 1110 ntAPPRIS P1 TSL 3 BASIC18.15■□□□□ 0.5
USB1Q9BQ65 CUEDC2-201ENST00000369937 1191 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
USB1Q9BQ65 MIPEPP3-201ENST00000412105 444 ntBASIC18.15■□□□□ 0.5
USB1Q9BQ65 ALKBH6-212ENST00000485128 959 ntTSL 5 BASIC18.15■□□□□ 0.5
USB1Q9BQ65 ISCU-212ENST00000547005 795 ntTSL 3 BASIC18.15■□□□□ 0.5
USB1Q9BQ65 CEBPE-201ENST00000206513 1554 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
USB1Q9BQ65 THOC3-201ENST00000265097 1589 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
USB1Q9BQ65 TPM1-208ENST00000404484 1568 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
USB1Q9BQ65 BASP1-201ENST00000322611 1878 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
USB1Q9BQ65 CLN8-213ENST00000637156 1897 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
USB1Q9BQ65 B3GNT2-201ENST00000301998 2763 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
USB1Q9BQ65 EEF1DP3-201ENST00000428783 1309 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
USB1Q9BQ65 DNAAF3-207ENST00000527223 2228 ntAPPRIS ALT2 TSL 2 BASIC18.15■□□□□ 0.5
USB1Q9BQ65 PRRT4-207ENST00000535159 2897 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
USB1Q9BQ65 MRPL40-201ENST00000333130 1387 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
USB1Q9BQ65 PITX3-201ENST00000370002 1391 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
USB1Q9BQ65 NGLY1-204ENST00000396649 2024 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
USB1Q9BQ65 ZNF213-201ENST00000396878 3313 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
USB1Q9BQ65 MZF1-203ENST00000594234 2385 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
USB1Q9BQ65 AIRN-201ENST00000601203 4374 ntBASIC18.14■□□□□ 0.5
USB1Q9BQ65 NKX6-1-202ENST00000515820 2194 ntTSL 3 BASIC18.14■□□□□ 0.49
USB1Q9BQ65 KIF12-207ENST00000640217 2194 ntAPPRIS P5 TSL 5 BASIC18.14■□□□□ 0.49
USB1Q9BQ65 ADAM33-202ENST00000356518 3677 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.49
USB1Q9BQ65 PHACTR3-202ENST00000359926 2252 ntTSL 2 BASIC18.14■□□□□ 0.49
USB1Q9BQ65 TBL1Y-201ENST00000346432 2312 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
USB1Q9BQ65 GRTP1-201ENST00000326039 1294 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
USB1Q9BQ65 TPSAB1-201ENST00000338844 1175 ntAPPRIS P2 TSL 1 (best) BASIC18.14■□□□□ 0.49
USB1Q9BQ65 EMC6-202ENST00000397133 762 ntAPPRIS P1 TSL 2 BASIC18.14■□□□□ 0.49
USB1Q9BQ65 NAT16-202ENST00000443096 1286 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
USB1Q9BQ65 ZNF324-202ENST00000535298 1006 ntTSL 5 BASIC18.14■□□□□ 0.49
USB1Q9BQ65 LYRM1-205ENST00000562740 931 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
USB1Q9BQ65 AC005410.1-201ENST00000579522 462 ntTSL 3 BASIC18.14■□□□□ 0.49
USB1Q9BQ65 AC016405.3-201ENST00000607710 860 ntBASIC18.14■□□□□ 0.49
USB1Q9BQ65 MARS-234ENST00000630571 216 ntTSL 5 BASIC18.14■□□□□ 0.49
USB1Q9BQ65 MARS-235ENST00000630803 183 ntTSL 3 BASIC18.14■□□□□ 0.49
USB1Q9BQ65 NOS3-204ENST00000467517 2377 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
USB1Q9BQ65 PRSS33-202ENST00000570702 1676 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
USB1Q9BQ65 TCIRG1-213ENST00000532635 2457 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
USB1Q9BQ65 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC18.14■□□□□ 0.49
USB1Q9BQ65 ANTXR1-202ENST00000409349 1384 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
USB1Q9BQ65 HPCAL1-201ENST00000307845 1751 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
USB1Q9BQ65 MAGIX-207ENST00000615915 1757 ntAPPRIS ALT2 TSL 2 BASIC18.14■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 33.7 ms