Protein–RNA interactions for Protein: Q99742

NPAS1, Neuronal PAS domain-containing protein 1, humanhuman

Predictions only

Length 590 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS1Q99742 NUP160-203ENST00000526870 1537 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
NPAS1Q99742 AC006128.1-201ENST00000624704 1661 ntBASIC18.63■□□□□ 0.57
NPAS1Q99742 SMG1P5-201ENST00000411546 2362 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
NPAS1Q99742 EIF2B4-201ENST00000347454 1792 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
NPAS1Q99742 LAYN-204ENST00000525126 1763 ntTSL 5 BASIC18.63■□□□□ 0.57
NPAS1Q99742 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
NPAS1Q99742 ADAMTS2-202ENST00000274609 2044 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
NPAS1Q99742 XBP1-202ENST00000344347 1131 ntTSL 5 BASIC18.63■□□□□ 0.57
NPAS1Q99742 METTL15-202ENST00000403099 795 ntTSL 5 BASIC18.63■□□□□ 0.57
NPAS1Q99742 AC092171.1-201ENST00000455866 753 ntTSL 2 BASIC18.63■□□□□ 0.57
NPAS1Q99742 HMX1-202ENST00000506970 651 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
NPAS1Q99742 Z92544.1-201ENST00000567091 730 ntTSL 3 BASIC18.63■□□□□ 0.57
NPAS1Q99742 ANAPC11-219ENST00000583839 499 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
NPAS1Q99742 COPS7A-208ENST00000538410 1610 ntTSL 3 BASIC18.63■□□□□ 0.57
NPAS1Q99742 PRKCD-202ENST00000394729 2810 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
NPAS1Q99742 CREB3-201ENST00000353704 1832 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
NPAS1Q99742 NSMF-203ENST00000371472 1852 ntAPPRIS P3 TSL 2 BASIC18.63■□□□□ 0.57
NPAS1Q99742 CYP26A1-201ENST00000224356 2125 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
NPAS1Q99742 WDR4-202ENST00000398208 2122 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
NPAS1Q99742 ZFP69B-202ENST00000411995 2109 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
NPAS1Q99742 COMT-202ENST00000361682 2437 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
NPAS1Q99742 IFI6-202ENST00000361157 841 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
NPAS1Q99742 TRNT1-207ENST00000420393 854 ntTSL 3 BASIC18.62■□□□□ 0.57
NPAS1Q99742 CDV3P1-201ENST00000471403 739 ntBASIC18.62■□□□□ 0.57
NPAS1Q99742 CASP6-205ENST00000505486 538 ntTSL 4 BASIC18.62■□□□□ 0.57
NPAS1Q99742 AC025754.1-201ENST00000507566 407 ntTSL 3 BASIC18.62■□□□□ 0.57
NPAS1Q99742 ZNF696-204ENST00000520333 605 ntTSL 5 BASIC18.62■□□□□ 0.57
NPAS1Q99742 C11orf24-209ENST00000533310 980 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
NPAS1Q99742 AL162412.1-201ENST00000567129 965 ntBASIC18.62■□□□□ 0.57
NPAS1Q99742 FAM21FP-204ENST00000608637 956 ntBASIC18.62■□□□□ 0.57
NPAS1Q99742 AC093762.2-201ENST00000641700 291 ntAPPRIS P1 BASIC18.62■□□□□ 0.57
NPAS1Q99742 PTX4-203ENST00000447419 1516 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
NPAS1Q99742 AC110285.2-201ENST00000571724 1565 ntTSL 2 BASIC18.62■□□□□ 0.57
NPAS1Q99742 OR10C1-203ENST00000444197 1672 ntAPPRIS P1 BASIC18.62■□□□□ 0.57
NPAS1Q99742 EXTL3-213ENST00000523149 1779 ntTSL 5 BASIC18.62■□□□□ 0.57
NPAS1Q99742 SMPDL3A-203ENST00000539041 1755 ntTSL 2 BASIC18.62■□□□□ 0.57
NPAS1Q99742 CHRDL2-203ENST00000376332 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
NPAS1Q99742 CAMK2B-216ENST00000440254 2097 ntAPPRIS P4 TSL 1 (best) BASIC18.62■□□□□ 0.57
NPAS1Q99742 ADAM9-203ENST00000466936 2053 ntTSL 2 BASIC18.62■□□□□ 0.57
NPAS1Q99742 SLC46A3-202ENST00000380814 2121 ntAPPRIS ALT1 TSL 1 (best) BASIC18.62■□□□□ 0.57
NPAS1Q99742 RAP2C-202ENST00000370874 2333 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
NPAS1Q99742 SLC35A3-208ENST00000638336 2438 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
NPAS1Q99742 PRRT4-207ENST00000535159 2897 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
NPAS1Q99742 KLF9-201ENST00000377126 5175 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
NPAS1Q99742 REXO1-201ENST00000170168 4591 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
NPAS1Q99742 PAXIP1-202ENST00000404141 3827 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
NPAS1Q99742 TRIM3-202ENST00000359518 3042 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
NPAS1Q99742 UGP2-201ENST00000337130 2338 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
NPAS1Q99742 TMED4-203ENST00000457408 2322 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
NPAS1Q99742 DBNDD1-201ENST00000002501 2079 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
NPAS1Q99742 FEZF1-203ENST00000442488 2099 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
NPAS1Q99742 LYSMD2-201ENST00000267838 1759 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
NPAS1Q99742 OTUB1-209ENST00000538426 1729 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
NPAS1Q99742 SLC25A24P1-201ENST00000411846 1569 ntTSL 5 BASIC18.61■□□□□ 0.57
NPAS1Q99742 PGPEP1L-202ENST00000535714 1483 ntTSL 2 BASIC18.61■□□□□ 0.57
NPAS1Q99742 GRTP1-203ENST00000375431 1384 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
NPAS1Q99742 UCHL5-204ENST00000367451 1346 ntTSL 5 BASIC18.61■□□□□ 0.57
NPAS1Q99742 SMCO4-201ENST00000298966 1104 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
NPAS1Q99742 SAPCD2P1-201ENST00000395413 1184 ntBASIC18.61■□□□□ 0.57
NPAS1Q99742 PIGP-203ENST00000399098 972 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
NPAS1Q99742 NRXN2-205ENST00000409571 6381 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
NPAS1Q99742 CD99P1-203ENST00000431582 602 ntTSL 4 BASIC18.61■□□□□ 0.57
NPAS1Q99742 NCF1B-203ENST00000435988 1254 ntBASIC18.61■□□□□ 0.57
NPAS1Q99742 TMEM41B-205ENST00000533723 723 ntTSL 2 BASIC18.61■□□□□ 0.57
NPAS1Q99742 NUTF2-201ENST00000219169 2321 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
NPAS1Q99742 AP006284.1-201ENST00000527620 2210 ntTSL 2 BASIC18.61■□□□□ 0.57
NPAS1Q99742 SACM1L-202ENST00000418611 2164 ntTSL 2 BASIC18.61■□□□□ 0.57
NPAS1Q99742 METTL1-202ENST00000324871 2066 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
NPAS1Q99742 NDUFAF3-202ENST00000326925 2012 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
NPAS1Q99742 APPL2-201ENST00000258530 3239 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
NPAS1Q99742 CATSPER2-201ENST00000321596 1820 ntAPPRIS P3 TSL 5 BASIC18.6■□□□□ 0.57
NPAS1Q99742 NSUN5-204ENST00000438747 1663 ntAPPRIS P4 TSL 1 (best) BASIC18.6■□□□□ 0.57
NPAS1Q99742 LPAR1-201ENST00000358883 2687 ntAPPRIS P2 TSL 2 BASIC18.6■□□□□ 0.57
NPAS1Q99742 HEY2-201ENST00000368364 2678 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
NPAS1Q99742 PRMT5-204ENST00000397441 2418 ntTSL 2 BASIC18.6■□□□□ 0.57
NPAS1Q99742 FAM72B-202ENST00000369390 2396 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
NPAS1Q99742 EPN1-201ENST00000085079 2355 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
NPAS1Q99742 STAC-204ENST00000457375 1366 ntTSL 2 BASIC18.6■□□□□ 0.57
NPAS1Q99742 GRB10-206ENST00000402497 2289 ntTSL 5 BASIC18.6■□□□□ 0.57
NPAS1Q99742 PKD1P6-201ENST00000343738 4769 ntBASIC18.6■□□□□ 0.57
NPAS1Q99742 TMPO-201ENST00000261210 820 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
NPAS1Q99742 ASIP-201ENST00000374954 586 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
NPAS1Q99742 AL355472.2-201ENST00000422958 438 ntBASIC18.6■□□□□ 0.57
NPAS1Q99742 GUSBP6-202ENST00000438529 1198 ntBASIC18.6■□□□□ 0.57
NPAS1Q99742 AC083906.2-201ENST00000511578 360 ntBASIC18.6■□□□□ 0.57
NPAS1Q99742 AC105036.2-201ENST00000569468 176 ntBASIC18.6■□□□□ 0.57
NPAS1Q99742 LITAF-205ENST00000570904 1118 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
NPAS1Q99742 UBA5-211ENST00000493720 2058 ntTSL 5 BASIC18.6■□□□□ 0.57
NPAS1Q99742 TMEM62-201ENST00000260403 2771 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
NPAS1Q99742 NNT-AS1-206ENST00000606697 1945 ntTSL 2 BASIC18.6■□□□□ 0.57
NPAS1Q99742 PHLDA3-202ENST00000367311 2640 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
NPAS1Q99742 FMNL2-201ENST00000288670 5575 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
NPAS1Q99742 EGFL7-201ENST00000308874 1747 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
NPAS1Q99742 PARD3-209ENST00000374790 5825 ntTSL 5 BASIC18.6■□□□□ 0.57
NPAS1Q99742 DET1-201ENST00000268148 2267 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
NPAS1Q99742 PLSCR3-213ENST00000576362 1605 ntTSL 3 BASIC18.6■□□□□ 0.57
NPAS1Q99742 INPP1-202ENST00000392329 2162 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
NPAS1Q99742 ZNF821-202ENST00000425432 2000 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
NPAS1Q99742 ABLIM2-205ENST00000428004 2573 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
NPAS1Q99742 PHACTR2-203ENST00000367584 2490 ntAPPRIS ALT2 TSL 5 BASIC18.59■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 59.9 ms