Protein–RNA interactions for Protein: Q96SZ6

CDK5RAP1, CDK5 regulatory subunit-associated protein 1, humanhuman

Known RBP Predictions only

Length 601 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP1Q96SZ6 RENBP-201ENST00000369997 1322 ntTSL 5 BASIC21.29■■□□□ 1
CDK5RAP1Q96SZ6 TTYH1-202ENST00000376530 1885 ntAPPRIS P3 TSL 1 (best) BASIC21.28■■□□□ 1
CDK5RAP1Q96SZ6 NRN1-203ENST00000616243 1556 ntAPPRIS P1 TSL 4 BASIC21.28■■□□□ 1
CDK5RAP1Q96SZ6 CDC42SE2-206ENST00000503291 2025 ntTSL 1 (best) BASIC21.28■■□□□ 1
CDK5RAP1Q96SZ6 CD7-207ENST00000584284 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC21.28■■□□□ 1
CDK5RAP1Q96SZ6 OSR1-201ENST00000272223 1936 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
CDK5RAP1Q96SZ6 SLC25A10-201ENST00000331531 1946 ntTSL 1 (best) BASIC21.28■■□□□ 1
CDK5RAP1Q96SZ6 RPS14-201ENST00000312037 711 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
CDK5RAP1Q96SZ6 IFI6-202ENST00000361157 841 ntAPPRIS ALT2 TSL 1 (best) BASIC21.28■■□□□ 1
CDK5RAP1Q96SZ6 CNIH4-203ENST00000366858 702 ntTSL 3 BASIC21.28■■□□□ 1
CDK5RAP1Q96SZ6 AL691442.1-201ENST00000505139 1042 ntAPPRIS P1 TSL 2 BASIC21.28■■□□□ 1
CDK5RAP1Q96SZ6 ASGR1-204ENST00000572879 797 ntTSL 5 BASIC21.28■■□□□ 1
CDK5RAP1Q96SZ6 NRG3-201ENST00000372141 2158 ntAPPRIS P3 TSL 1 (best) BASIC21.28■■□□□ 1
CDK5RAP1Q96SZ6 IGFLR1-201ENST00000246532 1645 ntAPPRIS P2 TSL 1 (best) BASIC21.28■■□□□ 1
CDK5RAP1Q96SZ6 KLHL35-201ENST00000376292 1500 ntTSL 1 (best) BASIC21.28■■□□□ 1
CDK5RAP1Q96SZ6 APLP2-204ENST00000345598 1862 ntTSL 1 (best) BASIC21.28■■□□□ 1
CDK5RAP1Q96SZ6 PRKACA-201ENST00000308677 2677 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
CDK5RAP1Q96SZ6 OSR2-203ENST00000457907 2126 ntTSL 2 BASIC21.28■■□□□ 1
CDK5RAP1Q96SZ6 SUMF2-204ENST00000395436 1683 ntAPPRIS ALT2 TSL 1 (best) BASIC21.28■■□□□ 1
CDK5RAP1Q96SZ6 WWC2-AS2-201ENST00000578387 2183 ntBASIC21.27■■□□□ 1
CDK5RAP1Q96SZ6 CATSPER2-201ENST00000321596 1820 ntAPPRIS P3 TSL 5 BASIC21.27■■□□□ 1
CDK5RAP1Q96SZ6 PKMYT1-216ENST00000574730 1806 ntTSL 2 BASIC21.27■■□□□ 1
CDK5RAP1Q96SZ6 C19orf12-201ENST00000323670 2464 ntAPPRIS P1 TSL 2 BASIC21.27■■□□□ 1
CDK5RAP1Q96SZ6 ABCG4-204ENST00000615496 2459 ntAPPRIS P1 TSL 2 BASIC21.27■■□□□ 1
CDK5RAP1Q96SZ6 IPO13-201ENST00000372339 1201 ntTSL 2 BASIC21.27■■□□□ 1
CDK5RAP1Q96SZ6 CFL1-211ENST00000531407 1062 ntTSL 2 BASIC21.27■■□□□ 1
CDK5RAP1Q96SZ6 C2orf69P4-201ENST00000565394 541 ntBASIC21.27■■□□□ 1
CDK5RAP1Q96SZ6 FBXL12-203ENST00000586073 582 ntTSL 2 BASIC21.27■■□□□ 1
CDK5RAP1Q96SZ6 BRWD1-AS2-201ENST00000603064 1028 ntBASIC21.27■■□□□ 1
CDK5RAP1Q96SZ6 CD99-210ENST00000611428 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC21.27■■□□□ 1
CDK5RAP1Q96SZ6 HLA-B-256ENST00000639848 1089 ntBASIC21.27■■□□□ 1
CDK5RAP1Q96SZ6 MEGF6-202ENST00000356575 5455 ntAPPRIS P1 TSL 1 (best) BASIC21.27■□□□□ 0.99
CDK5RAP1Q96SZ6 GPAA1-202ENST00000361036 1840 ntTSL 1 (best) BASIC21.27■□□□□ 0.99
CDK5RAP1Q96SZ6 ARSA-202ENST00000356098 1895 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
CDK5RAP1Q96SZ6 CHRDL2-203ENST00000376332 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC21.26■□□□□ 0.99
CDK5RAP1Q96SZ6 AC109460.3-201ENST00000569969 5296 ntTSL 2 BASIC21.26■□□□□ 0.99
CDK5RAP1Q96SZ6 PTPN18-202ENST00000347849 2472 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
CDK5RAP1Q96SZ6 PRTN3-201ENST00000234347 1026 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
CDK5RAP1Q96SZ6 HCFC1R1-202ENST00000354679 765 ntTSL 2 BASIC21.26■□□□□ 0.99
CDK5RAP1Q96SZ6 CCDC103-202ENST00000410006 921 ntAPPRIS P1 TSL 2 BASIC21.26■□□□□ 0.99
CDK5RAP1Q96SZ6 NAA60-204ENST00000421765 1045 ntTSL 2 BASIC21.26■□□□□ 0.99
CDK5RAP1Q96SZ6 GATS-209ENST00000454084 1030 ntTSL 3 BASIC21.26■□□□□ 0.99
CDK5RAP1Q96SZ6 AF274858.3-202ENST00000569906 755 ntTSL 3 BASIC21.26■□□□□ 0.99
CDK5RAP1Q96SZ6 TXNL4A-203ENST00000585474 1185 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
CDK5RAP1Q96SZ6 INO80E-214ENST00000620599 515 ntTSL 2 BASIC21.26■□□□□ 0.99
CDK5RAP1Q96SZ6 AK4-208ENST00000546702 1335 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
CDK5RAP1Q96SZ6 P2RX4-202ENST00000337233 2032 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
CDK5RAP1Q96SZ6 PGPEP1L-202ENST00000535714 1483 ntTSL 2 BASIC21.26■□□□□ 0.99
CDK5RAP1Q96SZ6 GPR162-203ENST00000428545 1610 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
CDK5RAP1Q96SZ6 H2AFY-217ENST00000511689 2789 ntAPPRIS P4 TSL 1 (best) BASIC21.25■□□□□ 0.99
CDK5RAP1Q96SZ6 TMEM11-201ENST00000317635 2095 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
CDK5RAP1Q96SZ6 NRXN2-204ENST00000377559 6413 ntAPPRIS ALT2 TSL 1 (best) BASIC21.25■□□□□ 0.99
CDK5RAP1Q96SZ6 KRT19-201ENST00000361566 1390 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
CDK5RAP1Q96SZ6 FSCN2-202ENST00000417245 1665 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
CDK5RAP1Q96SZ6 CCDC38-201ENST00000344280 2277 ntAPPRIS P2 TSL 1 (best) BASIC21.25■□□□□ 0.99
CDK5RAP1Q96SZ6 FN3K-201ENST00000300784 1434 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
CDK5RAP1Q96SZ6 MCHR1-202ENST00000381433 1219 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
CDK5RAP1Q96SZ6 ANKRD39-201ENST00000393537 976 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
CDK5RAP1Q96SZ6 LINC01956-201ENST00000557729 695 ntTSL 5 BASIC21.25■□□□□ 0.99
CDK5RAP1Q96SZ6 CLN6-207ENST00000566347 981 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
CDK5RAP1Q96SZ6 AC060766.5-201ENST00000590539 871 ntBASIC21.25■□□□□ 0.99
CDK5RAP1Q96SZ6 GSEC-202ENST00000629441 1572 ntTSL 2 BASIC21.25■□□□□ 0.99
CDK5RAP1Q96SZ6 MIR2861-201ENST00000636310 90 ntBASIC21.25■□□□□ 0.99
CDK5RAP1Q96SZ6 RPS6KA2-201ENST00000265678 5824 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
CDK5RAP1Q96SZ6 CHN1-203ENST00000409156 1761 ntTSL 2 BASIC21.25■□□□□ 0.99
CDK5RAP1Q96SZ6 MFSD7-204ENST00000503156 1632 ntAPPRIS ALT2 TSL 5 BASIC21.25■□□□□ 0.99
CDK5RAP1Q96SZ6 ANKRD65-204ENST00000520296 1632 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
CDK5RAP1Q96SZ6 NFIX-205ENST00000585575 1485 ntAPPRIS P1 TSL 5 BASIC21.25■□□□□ 0.99
CDK5RAP1Q96SZ6 TSPAN3-207ENST00000559494 1326 ntTSL 5 BASIC21.25■□□□□ 0.99
CDK5RAP1Q96SZ6 RBM42-204ENST00000589559 1328 ntTSL 5 BASIC21.25■□□□□ 0.99
CDK5RAP1Q96SZ6 PMPCA-203ENST00000399219 1987 ntTSL 2 BASIC21.25■□□□□ 0.99
CDK5RAP1Q96SZ6 CACYBP-201ENST00000367679 2766 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
CDK5RAP1Q96SZ6 PUF60-203ENST00000453551 1842 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
CDK5RAP1Q96SZ6 LMAN1L-202ENST00000379709 1699 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
CDK5RAP1Q96SZ6 ATG4B-204ENST00000402096 1685 ntTSL 2 BASIC21.24■□□□□ 0.99
CDK5RAP1Q96SZ6 UNC93B1-201ENST00000227471 2316 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
CDK5RAP1Q96SZ6 MAGI2-212ENST00000626691 4599 ntTSL 5 BASIC21.24■□□□□ 0.99
CDK5RAP1Q96SZ6 CRK-204ENST00000574295 1391 ntTSL 5 BASIC21.24■□□□□ 0.99
CDK5RAP1Q96SZ6 DTX3-201ENST00000337737 2029 ntAPPRIS P3 TSL 2 BASIC21.24■□□□□ 0.99
CDK5RAP1Q96SZ6 AMZ1-202ENST00000407112 1862 ntTSL 2 BASIC21.24■□□□□ 0.99
CDK5RAP1Q96SZ6 OBSL1-214ENST00000603926 5520 ntTSL 5 BASIC21.24■□□□□ 0.99
CDK5RAP1Q96SZ6 THAP7-201ENST00000215742 1213 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
CDK5RAP1Q96SZ6 CFC1-201ENST00000259216 1046 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
CDK5RAP1Q96SZ6 CFC1B-201ENST00000281882 1071 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
CDK5RAP1Q96SZ6 AC114730.1-201ENST00000400768 472 ntTSL 4 BASIC21.24■□□□□ 0.99
CDK5RAP1Q96SZ6 AC004882.1-201ENST00000416352 590 ntTSL 3 BASIC21.24■□□□□ 0.99
CDK5RAP1Q96SZ6 DIMT1-202ENST00000506390 1208 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
CDK5RAP1Q96SZ6 ABCC3-217ENST00000515707 656 ntTSL 3 BASIC21.24■□□□□ 0.99
CDK5RAP1Q96SZ6 VGLL3-201ENST00000383698 2475 ntAPPRIS ALT2 TSL 1 (best) BASIC21.24■□□□□ 0.99
CDK5RAP1Q96SZ6 CNRIP1-201ENST00000263655 1953 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
CDK5RAP1Q96SZ6 FXYD3-203ENST00000435734 1467 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
CDK5RAP1Q96SZ6 NR1H2-204ENST00000593926 1828 ntAPPRIS P2 TSL 5 BASIC21.24■□□□□ 0.99
CDK5RAP1Q96SZ6 PCED1A-202ENST00000360652 2016 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
CDK5RAP1Q96SZ6 NUDT16L1-202ENST00000405142 2040 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
CDK5RAP1Q96SZ6 TADA2B-204ENST00000512388 1343 ntTSL 5 BASIC21.24■□□□□ 0.99
CDK5RAP1Q96SZ6 GUSB-201ENST00000304895 2300 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
CDK5RAP1Q96SZ6 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC21.23■□□□□ 0.99
CDK5RAP1Q96SZ6 TRIM3-214ENST00000536344 2704 ntTSL 2 BASIC21.23■□□□□ 0.99
CDK5RAP1Q96SZ6 ZNF511-201ENST00000359035 2004 ntTSL 2 BASIC21.23■□□□□ 0.99
CDK5RAP1Q96SZ6 ADRM1-201ENST00000253003 1478 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Retrieved 100 of 98,524 protein–RNA pairs in 25.7 ms